RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 TMCO3Q6UWJ1 677 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 ZNF564Q8TBZ8 553 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 CXorf40AQ8TE69 158 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 FAF2Q96CS3 445 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 WRAP53Q9BUR4 548 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 CINPQ9BW66 212 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 TCEAL2Q9H3H9 227 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 ATP13A3Q9H7F0 1226 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 DNAJC28Q9NX36 388 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 SEPT3Q9UH03 358 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 COQ6Q9Y2Z9 468 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 ACACAQ13085 2346 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 TRABD2BA6NFA1 517 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 NEBLO76041 1014 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 PROSCO94903 275 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 SERPINA4P29622 427 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 TAS2R40P59535 323 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 INSM1Q01101 510 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 MMRN1Q13201 1228 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 TRIM14Q14142 442 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 DPYSL3Q14195 570 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 ATP13A4Q4VNC1 1196 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 HES3Q5TGS1 186 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 MACC1Q6ZN28 852 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 RBFAQ8N0V3 343 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 CBARPQ8N350 705 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 TEX26Q8N6G2 289 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 APOLD1Q96LR9 279 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 CCDC86Q9H6F5 360 aaKnown RBP18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 UVRAGQ9P2Y5 699 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 SHROOM3Q8TF72 1996 aa18.11■□□□□ 0.49
TRAPPC3-202ENST00000373162 MYO1FO00160 1098 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 FFAR2O15552 330 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 PRKCGP05129 697 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 LIG3P49916 1009 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 IHHQ14623 411 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 PAFAH1B3Q15102 231 aaKnown RBP18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 CDCP2Q5VXM1 449 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 NCBP2-AS2Q69YL0 99 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 ALG1LQ6GMV1 187 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 LIPIQ6XZB0 460 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 NYAP1Q6ZVC0 841 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 DPPA4Q7L190 304 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 DCBLD1Q8N8Z6 715 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 OR8K1Q8NGG5 319 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 PCDH19Q8TAB3 1148 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 NUDCD1Q96RS6 583 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 LRRC61Q9BV99 259 aa18.1■□□□□ 0.49
TRAPPC3-202ENST00000373162 SMG1Q96Q15 3661 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 ASXL3Q9C0F0 2248 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 TTC24A2A3L6 582 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 TPP1O14773 563 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 AQP9O43315 295 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 MFSD11O43934 449 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 MFAP3LO75121 409 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 SOCS5O75159 536 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 GCATO75600 419 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 JUNDP17535 347 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 MAN1A1P33908 653 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 HSPA9P38646 679 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 PEX5P50542 639 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 RENBPP51606 427 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 CDH6P55285 790 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 SEMG2Q02383 582 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 BCL2L1Q07817 233 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 GALNT2Q10471 571 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 TBX2Q13207 712 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 LRRC14Q15048 493 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 NFKBIBQ15653 356 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 CCDC157Q569K6 752 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 KCTD16Q68DU8 428 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 PHACTR4Q8IZ21 702 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 PDCD7Q8N8D1 485 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 MAML1Q92585 1016 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 FATE1Q969F0 183 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 FUBP1Q96AE4 644 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 CHP1Q99653 195 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 ZNF670Q9BS34 389 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 DUSP23Q9BVJ7 150 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 C1QTNF7Q9BXJ2 289 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 CLPBQ9H078 707 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 USP29Q9HBJ7 922 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 ABHD10Q9NUJ1 306 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 LOC400499M0QZD8 3231 aa18.09■□□□□ 0.49
TRAPPC3-202ENST00000373162 H3BM21 787 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 MTA2O94776 668 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 TPM3P06753 285 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 GP1BAP07359 652 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 H2AFZP0C0S5 128 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 TMEM253P0C7T8 217 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 MYF5P13349 255 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 SERPINB6P35237 376 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 SCNN1BP51168 640 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 TRAF2Q12933 501 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 TARDBPQ13148 414 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 RTP5Q14D33 572 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 ZCCHC8Q6NZY4 707 aaKnown RBP18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 ERAP2Q6P179 960 aa18.08■□□□□ 0.48
TRAPPC3-202ENST00000373162 H2AFVQ71UI9 128 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms