RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ITM2CQ9NQX7 267 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 ZDHHC2Q9UIJ5 367 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 NUDT5Q9UKK9 219 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 AURKCQ9UQB9 309 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 LTBP3Q9NS15 1303 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 FADS2P1A8MWK0 482 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 USP12O75317 370 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 GABARAPO95166 117 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 PCMT1P22061 227 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 IL4RP24394 825 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 MLLT6P55198 1093 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 BNIP2Q12982 314 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 STK11Q15831 433 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 PRAMEF18Q5VWM3 479 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 CCBE1Q6UXH8 406 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 GDPD3Q7L5L3 318 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 DDIASQ8IXT1 998 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 FAM83FQ8NEG4 500 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 MAGEE2Q8TD90 523 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 CENPNQ96H22 339 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 GATA5Q9BWX5 397 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 IDI2Q9BXS1 227 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 MRPL9Q9BYD2 267 aaKnown RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 ILKAPQ9H0C8 392 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 DSN1Q9H410 356 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SLA2Q9H6Q3 261 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 PCDHA11Q9Y5I1 949 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 IGLV3-22A0A075B6J6 115 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 OR5K3A6NET4 321 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 H3BUI4 141 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 NDUFS2O75306 463 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 APRTP07741 180 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 RPL14P50914 215 aaKnown RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 MRPS15P82914 257 aaKnown RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 FAM214AQ32MH5 1076 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 KIAA1841Q6NSI8 718 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 DLK2Q6UY11 383 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 ENOSF1Q7L5Y1 443 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 KCTD20Q7Z5Y7 419 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 NIPA2Q8N8Q9 360 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SHCBP1Q8NEM2 672 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 TRIM63Q969Q1 353 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SLC45A3Q96JT2 553 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SH2D3AQ9BRG2 576 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 MRPL40Q9NQ50 206 aaKnown RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 NDFIP2Q9NV92 336 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 CAB39Q9Y376 341 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 TNRC6CQ9HCJ0 1690 aaKnown RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 TBX1O43435 398 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 LRCH4O75427 683 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 CD4P01730 458 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 ICAM2P13598 275 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 PRKACAP17612 351 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 IL32P24001 234 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 ALDH4A1P30038 563 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 PTGS2P35354 604 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SREBF1P36956 1147 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 GRIK1P39086 918 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 RPS9P46781 194 aaKnown RBP9.61□□□□□ -0.87
SF3A3-201ENST00000373019 PPP4CP60510 307 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 QRICH1Q2TAL8 776 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 LRRC8EQ6NSJ5 796 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 HID1Q8IV36 788 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 NLGN4XQ8N0W4 816 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 DCLK2Q8N568 766 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 OR13J1Q8NGT2 312 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SLC7A14Q8TBB6 771 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 LRRC39Q96DD0 335 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 SLC9A2Q9UBY0 812 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 POLLQ9UGP5 575 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 BAG5Q9UL15 447 aa9.61□□□□□ -0.87
SF3A3-201ENST00000373019 AP3D1O14617 1153 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 SSX4O60224 188 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PTTG1O95997 202 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ARSAP15289 507 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 WEE1P30291 646 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 HTR2BP41595 481 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 MAGEA6P43360 314 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 HCAR3P49019 387 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 VBP1P61758 197 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 AP3B2Q13367 1082 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PIGHQ14442 188 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 GLRA4Q5JXX5 417 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 REP15Q6BDI9 236 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF438Q7Z4V0 828 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CMC1Q7Z7K0 106 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 GALNT7Q86SF2 657 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CCDC103Q8IW40 242 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ADGRG5Q8IZF4 528 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PSD4Q8NDX1 1056 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 OR7A2PQ8NGA2 310 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 GRPEL2Q8TAA5 225 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 HDAC10Q969S8 669 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 TTYH2Q9BSA4 534 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms