RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CPA6Q8N4T0 437 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 SLC25A41Q8N5S1 370 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 FRS2Q8WU20 508 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 STAMBPL1Q96FJ0 436 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 ZNF778Q96MU6 729 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 TDRD1Q9BXT4 1180 aaKnown RBP14.81□□□□□ -0.04
CXCL12-201ENST00000343575 SCUBE2Q9NQ36 999 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 RABGEF1Q9UJ41 708 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 HCN2Q9UL51 889 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 MAD1L1Q9Y6D9 718 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 TCRBV9S1A1TA0A576 114 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 ATP9BO43861 1147 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 ANP32DO95626 131 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 EPOP01588 193 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 CES1P23141 567 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 GCAP28676 217 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 NPY2RP49146 381 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 DLG2Q15700 870 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 C22orf39Q6P5X5 142 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 CES3Q6UWW8 571 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 MTSS1LQ765P7 747 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 PALM2Q8IXS6 379 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 UNC5BQ8IZJ1 945 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 ISG20Q96AZ6 181 aaKnown RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 FEM1CQ96JP0 617 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 FCRL3Q96P31 734 aaPredicted RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 ELAC2Q9BQ52 826 aaKnown RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 VPS37BQ9H9H4 285 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 FBRSL1Q9HCM7 1045 aaKnown RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 CHRAC1Q9NRG0 131 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 BFARQ9NZS9 450 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 DEC1Q9P2X7 70 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 EVLQ9UI08 416 aaPredicted RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 CHKBQ9Y259 395 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 MYO10Q9HD67 2058 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 TRAFD1O14545 582 aaPredicted RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 RASGRF2O14827 1237 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 TSHRP16473 764 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 POLR2EP19388 210 aaKnown RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 SOX9P48436 509 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 CSNK1DP48730 415 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 KDSRQ06136 332 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 TRMT10BQ6PF06 316 aaKnown RBP14.8□□□□□ -0.04
CXCL12-201ENST00000343575 TMEM135Q86UB9 458 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 DEFB123Q8N688 67 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 ARMC2Q8NEN0 867 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 OR2AP1Q8NGE2 309 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 FBF1Q8TES7 1133 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 CFAP36Q96G28 342 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 SMIM14Q96QK8 99 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 IL22Q9GZX6 179 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 ELOVL2Q9NXB9 296 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 SLC25A13Q9UJS0 675 aa14.8□□□□□ -0.04
CXCL12-201ENST00000343575 MUC22E2RYF6 1773 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 ZCWPW2A0A1B0GU75 182 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 TTC34A8MYJ7 566 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 FZD6O60353 706 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 PRKCGP05129 697 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 DLDP09622 509 aaKnown RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 FOSL2P15408 326 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 VASPP50552 380 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 EFTUD2Q15029 972 aaKnown RBP eCLIP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 SKIV2LQ15477 1246 aaKnown RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 ITPRIPL2Q3MIP1 535 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 RALGPS1Q5JS13 557 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 GRAMD4Q6IC98 578 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 TBC1D1Q86TI0 1168 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 METTL3Q86U44 580 aaKnown RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 CAMK1DQ8IU85 385 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 TERB1Q8NA31 727 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 EPS8L3Q8TE67 593 aaKnown RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 WFIKKN2Q8TEU8 576 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 GRAMD1AQ96CP6 724 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 MFSD3Q96ES6 412 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 RAB3IPQ96QF0 476 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-201ENST00000343575 KIFC1Q9BW19 673 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 CIPCQ9C0C6 399 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 MTG2Q9H4K7 406 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 ACSS3Q9H6R3 686 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 SMYD2Q9NRG4 433 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 EURLQ9NYK6 297 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 MOCS1Q9NZB8 636 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 ARL2BPQ9Y2Y0 163 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 RAI2Q9Y5P3 530 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 F5P12259 2224 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 TICRRQ7Z2Z1 1910 aa14.79□□□□□ -0.04
CXCL12-201ENST00000343575 TCEA3O75764 348 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 ATP5HO75947 161 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PGAM1P18669 254 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 NCALDP61601 193 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 AP1S1P61966 158 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 CCDC15Q0P6D6 951 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 BNIP1Q12981 228 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 NR1H3Q13133 447 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 GALNT3Q14435 633 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 POU6F1Q14863 301 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PTPRRQ15256 657 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms