RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CSPG4P5Q96PW8 444 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 THAP2Q9H0W7 228 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 CAAP1Q9H8G2 361 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 A0A1W2PQ67 120 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 TRAFD1O14545 582 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 LZTS3O60299 673 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 PEX11BO96011 259 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 RARAP10276 462 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 HNRNPH3P31942 346 aaKnown RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 LIG3P49916 1009 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 LBRQ14739 615 aaKnown RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 IRF4Q15306 451 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 ALKBH5Q6P6C2 394 aaKnown RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 TMCO3Q6UWJ1 677 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 ARHGAP36Q6ZRI8 547 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 ZSWIM9Q86XI8 627 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 LRRC49Q8IUZ0 686 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 PHACTR4Q8IZ21 702 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 FAM71BQ8TC56 605 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 LMX1AQ8TE12 382 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 IL12RB2Q99665 862 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 BOCQ9BWV1 1114 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 SLC13A1Q9BZW2 595 aa17.87■□□□□ 0.45
HDDC3-201ENST00000330334 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 RCOR3Q9P2K3 495 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 APOBEC3BQ9UH17 382 aaKnown RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 TDRD6O60522 2096 aaKnown RBP17.87■□□□□ 0.45
HDDC3-201ENST00000330334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-201ENST00000330334 EME2A4GXA9 379 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-201ENST00000330334 MYO1FO00160 1098 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 MUSKO15146 869 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 GCATO75600 419 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 GYPCP04921 128 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 TCF4P15884 667 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 AMPD1P23109 780 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 SCNN1BP51168 640 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 SLC25A11Q02978 314 aaKnown RBP17.86■□□□□ 0.45
HDDC3-201ENST00000330334 PPARDQ03181 441 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 SLC10A7Q0GE19 358 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 SMTNL2Q2TAL5 461 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 PRRT3Q5FWE3 981 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 RALGPS1Q5JS13 557 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 LVRNQ6Q4G3 990 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 KDM7AQ6ZMT4 941 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 ATL2Q8NHH9 583 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 TPCN2Q8NHX9 752 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 CPLX3Q8WVH0 158 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 HSPH1Q92598 858 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 GRAMD1AQ96CP6 724 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 NUP85Q9BW27 656 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 ANAPC7Q9UJX3 599 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 RALYQ9UKM9 306 aaKnown RBP17.86■□□□□ 0.45
HDDC3-201ENST00000330334 PNMA8BQ9ULN7 279 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-201ENST00000330334 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.86■□□□□ 0.45
HDDC3-201ENST00000330334 AK5Q9Y6K8 562 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 CACNA1GO43497 2377 aa17.86■□□□□ 0.45
HDDC3-201ENST00000330334 HTRA2O43464 458 aaPredicted RBP17.85■□□□□ 0.45
HDDC3-201ENST00000330334 MAFKO60675 156 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 SOCS5O75159 536 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 TPM3P06753 285 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 HOXC4P09017 264 aaPredicted RBP17.85■□□□□ 0.45
HDDC3-201ENST00000330334 CR2P20023 1033 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 IL4RP24394 825 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 HTR1BP28222 390 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 SERPINB6P35237 376 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 RPIAP49247 311 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 HK3P52790 923 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 MTM1Q13496 603 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 INPP5AQ14642 412 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 NFATC4Q14934 902 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 FAXCQ5TGI0 409 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 LIPIQ6XZB0 460 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 TP53INP2Q8IXH6 220 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 FSTL5Q8N475 847 aaPredicted RBP17.85■□□□□ 0.45
HDDC3-201ENST00000330334 IFI44Q8TCB0 444 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 GLMNQ92990 594 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 APOOQ9BUR5 198 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 LRRC61Q9BV99 259 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 ABCG4Q9H172 646 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 PCDH18Q9HCL0 1135 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 ETNK2Q9NVF9 386 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 IFNKQ9P0W0 207 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 NENFQ9UMX5 172 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 COQ6Q9Y2Z9 468 aa17.85■□□□□ 0.45
HDDC3-201ENST00000330334 ANXA6P08133 673 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 TSHRP16473 764 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 ADKP55263 362 aaKnown RBP17.84■□□□□ 0.45
HDDC3-201ENST00000330334 CDH6P55285 790 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 RALGDSQ12967 914 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 ELOCQ15369 112 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 NR0B2Q15466 257 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 NFKBIBQ15653 356 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 DEFB133Q30KQ1 61 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 CCDC122Q5T0U0 273 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 C6orf132Q5T0Z8 1188 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 TXNRD3NBQ6F5E7 133 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 DPPA4Q7L190 304 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 RBFAQ8N0V3 343 aa17.84■□□□□ 0.45
HDDC3-201ENST00000330334 BBS5Q8N3I7 341 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms