RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ST3GAL1Q11201 340 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 RUNX2Q13950 521 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 DCAF6Q58WW2 860 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 SLC45A4Q5BKX6 768 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 PRAMEF19Q5SWL8 479 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 LRRC8EQ6NSJ5 796 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 NCEH1Q6PIU2 408 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 Q6ZSV7 163 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 IRF2BP2Q7Z5L9 587 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 FAM9BQ8IZU0 186 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 WDR26Q9H7D7 661 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 PLEKHA5Q9HAU0 1116 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 KRCC1Q9NPI7 259 aaPredicted RBP4.61□□□□□ -1.67
CCDC54-201ENST00000261058 CTNNAL1Q9UBT7 734 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 HAO1Q9UJM8 370 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 MKLN1Q9UL63 735 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 FAM96BQ9Y3D0 163 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 KCNE2Q9Y6J6 123 aa4.61□□□□□ -1.67
CCDC54-201ENST00000261058 MS4A18H0YCH9 400 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 WNT9BO14905 357 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 ZBED4O75132 1171 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 SPARCP09486 303 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 ETFAP13804 333 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 MLH1P40692 756 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 PIP4K2AP48426 406 aaPredicted RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 P2RX3P56373 397 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 CSTF3Q12996 717 aaKnown RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 MAMLD1Q13495 774 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 OLIG2Q13516 323 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 MYBPC2Q14324 1141 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 PPP2R5BQ15173 497 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 TCTN1Q2MV58 587 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 PRTGQ2VWP7 1150 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 CXorf66Q5JRM2 361 aaPredicted RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 SPATA1Q5VX52 437 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 ZKSCAN2Q63HK3 967 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 PLEKHA7Q6IQ23 1121 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 CYP20A1Q6UW02 462 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 COLCA1Q6ZS62 124 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 ZNF367Q7RTV3 350 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 CTU1Q7Z7A3 348 aaKnown RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 LURAP1LQ8IV03 231 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 SLC35F3Q8IY50 421 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 TMEM199Q8N511 208 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 PARP16Q8N5Y8 322 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 USP6NLQ92738 828 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 GTF3C6Q969F1 213 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 FBXL8Q96CD0 374 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 SLITRK1Q96PX8 696 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 BBS4Q96RK4 519 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 NUF2Q9BZD4 464 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 TKTL2Q9H0I9 626 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 CATSPERBQ9H7T0 1116 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 CLK4Q9HAZ1 481 aaKnown RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 KRT84Q9NSB2 600 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 SLC6A13Q9NSD5 602 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 PLK2Q9NYY3 685 aa4.6□□□□□ -1.67
CCDC54-201ENST00000261058 LIMA1Q9UHB6 759 aaKnown RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 LSM4Q9Y4Z0 139 aaKnown RBP4.6□□□□□ -1.67
CCDC54-201ENST00000261058 TYW5A2RUC4 315 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 BECN2A8MW95 431 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 H0YGN5 161 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 CCER2I3L3R5 266 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 DOK2O60496 412 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 ATP2C2O75185 946 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 EIF2S1P05198 315 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 COMPP49747 757 aaPredicted RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 PLCD1P51178 756 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 MEA1Q16626 185 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 DPCR1Q3MIW9 517 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 ZNF280DQ6N043 979 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 QSOX2Q6ZRP7 698 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 BRINP3Q76B58 766 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 LINGO2Q7L985 606 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 TECPR1Q7Z6L1 1165 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 TDRPQ86YL5 185 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 ARHGAP12Q8IWW6 846 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 BEST2Q8NFU1 509 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 ARHGEF2Q92974 986 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 OTULINQ96BN8 352 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 MMABQ96EY8 250 aaPredicted RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 HMCESQ96FZ2 354 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 ZC3HAV1LQ96H79 300 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 SLC41A2Q96JW4 573 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 APOLD1Q96LR9 279 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 GFM1Q96RP9 751 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 SIN3AQ96ST3 1273 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 FBRSL1Q9HCM7 1045 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 CYSLTR2Q9NS75 346 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 HCFC1R1Q9NWW0 138 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 SLC45A1Q9Y2W3 748 aa4.59□□□□□ -1.67
CCDC54-201ENST00000261058 SRPRBQ9Y5M8 271 aaKnown RBP4.59□□□□□ -1.67
CCDC54-201ENST00000261058 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 RGS14O43566 566 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 SPRY3O43610 288 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 MMP2P08253 660 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 ARL3P36405 182 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 GPR18Q14330 331 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 HNF4GQ14541 408 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms