RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 Q6ZSR6 202 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 ABI3BPQ7Z7G0 1075 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 CCDC50Q8IVM0 306 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 NAXDQ8IW45 347 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 ASB12Q8WXK4 309 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 OLFM3Q96PB7 478 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 LENG8Q96PV6 779 aaPredicted RBP18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 POLR1EQ9GZS1 481 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 SLC32A1Q9H598 525 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 COQ6Q9Y2Z9 468 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 PCDHB9Q9Y5E1 797 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 HS3ST3A1Q9Y663 406 aa18.09■□□□□ 0.49
SNRPA1-201ENST00000254193 CACNA1EQ15878 2313 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 hCG_1818297A0A087WSY0 165 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 A8MX80 341 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 DFNA5O60443 496 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 HLA-DQB2P05538 268 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 PECAM1P16284 738 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 MMP12P39900 470 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 LIG3P49916 1009 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 AP1B1Q10567 949 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 IHHQ14623 411 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 RALGPS1Q5JS13 557 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 N4BP2L1Q5TBK1 243 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 PTAR1Q7Z6K3 402 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 EXD1Q8NHP7 514 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 SETD7Q8WTS6 366 aaKnown RBP18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 CENPTQ96BT3 561 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 HEMGNQ9BXL5 484 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 BTBD3Q9Y2F9 522 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 PCDHGB2Q9Y5G2 931 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 PCDHA3Q9Y5H8 950 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 RAI2Q9Y5P3 530 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 PI4KAP42356 2102 aa18.08■□□□□ 0.48
SNRPA1-201ENST00000254193 SPAARA0A1B0GVQ0 90 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 A6NNZ2 444 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 FPGTO14772 594 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 SOCS5O75159 536 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 C6P13671 934 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 NIPAL4Q0D2K0 466 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 RALGDSQ12967 914 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 ZBTB17Q13105 803 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 SUZ12Q15022 739 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 TFDP3Q5H9I0 405 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 ALG1LQ6GMV1 187 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 KYAT3Q6YP21 454 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 DBX2Q6ZNG2 339 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 GATAD2AQ86YP4 633 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 SLC22A18ASQ8N1D0 253 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 TXLNBQ8N3L3 684 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 CNTD1Q8N815 330 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 ARRDC2Q8TBH0 407 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 RBM41Q96IZ5 413 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 CEP41Q9BYV8 373 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 ERVMER34-1Q9H9K5 563 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 MBNL1Q9NR56 388 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 SEPT10Q9P0V9 454 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 AMACRQ9UHK6 382 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 ADGRG1Q9Y653 693 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 KNL1Q8NG31 2342 aa18.07■□□□□ 0.48
SNRPA1-201ENST00000254193 SPTBN2O15020 2390 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 CACNA1AO00555 2505 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 LAMA1P25391 3075 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 PPP1R12AO14974 1030 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 LZTS3O60299 673 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 PCDHGA12O60330 932 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 PGLSO95336 258 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 CPP00450 1065 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 CTNNA2P26232 953 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 NR2C2P49116 596 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 ARRB1P49407 418 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 IFI35P80217 286 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 PTPRRQ15256 657 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 ARMC12Q5T9G4 340 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 DENND6BQ8NEG7 585 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 RHBDD1Q8TEB9 315 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 SPOCK2Q92563 424 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 ALG3Q92685 438 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 HAUS1Q96CS2 278 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 IL12RB2Q99665 862 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 B4GALT6Q9UBX8 382 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 PCOLCE2Q9UKZ9 415 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 DNAH14Q0VDD8 3507 aa18.06■□□□□ 0.48
SNRPA1-201ENST00000254193 CCDC66A2RUB6 948 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 GOLGA8CPA6NN73 597 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 FLRT2O43155 660 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 CBFA2T3O75081 653 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 PDHA1P08559 390 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 TGM2P21980 687 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 CES1P23141 567 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 IGFALSP35858 605 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 RXRGP48443 463 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 PEX5P50542 639 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 SIM1P81133 766 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 BNIP3Q12983 259 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 PPP2R5EQ16537 467 aa18.05■□□□□ 0.48
SNRPA1-201ENST00000254193 WSCD2Q2TBF2 565 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms