RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FSHRP23945 695 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 TYK2P29597 1187 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 SLC1A2P43004 574 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 MAGEA12P43365 314 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 SULT2A1Q06520 285 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 PDK4Q16654 411 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 TCEAL5Q5H9L2 206 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 ZNF470Q6ECI4 717 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 NEPROQ6NW34 567 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 ZC3HC1Q86WB0 502 aaKnown RBP18.24■□□□□ 0.51
VIM-201ENST00000224237 DENND6AQ8IWF6 608 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 NPAS3Q8IXF0 933 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 LMNTD2Q8IXW0 634 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 C2CD4AQ8NCU7 369 aaPredicted RBP18.24■□□□□ 0.51
VIM-201ENST00000224237 STYXQ8WUJ0 223 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 RSPRY1Q96DX4 576 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 CABS1Q96KC9 395 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 FAM111AQ96PZ2 611 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 SLC2A11Q9BYW1 496 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 MFSD1Q9H3U5 465 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 GGT7Q9UJ14 662 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 SLC25A13Q9UJS0 675 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 GRID1Q9ULK0 1009 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 PLLPQ9Y342 182 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 XIRP2A4UGR9 3374 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.24■□□□□ 0.51
VIM-201ENST00000224237 AHSGP02765 367 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 DHRS4L1P0CG22 281 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 DRD4P21917 467 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 CTBP1Q13363 440 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 TMEM184AQ6ZMB5 413 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 RGS9BPQ6ZS82 235 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 CDHR3Q6ZTQ4 885 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 GLT6D1Q7Z4J2 308 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 PDCD6IPQ8WUM4 868 aaKnown RBP18.24■□□□□ 0.51
VIM-201ENST00000224237 OSCP1Q8WVF1 389 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
VIM-201ENST00000224237 GPR22Q99680 433 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 VPS11Q9H270 941 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 SNX15Q9NRS6 342 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 DUS2Q9NX74 493 aaKnown RBP18.24■□□□□ 0.51
VIM-201ENST00000224237 FZD6O60353 706 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 GLRA3O75311 464 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 PIRTP0C851 137 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 SRCP12931 536 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 VIPR2P41587 438 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 PDE1CQ14123 709 aaPredicted RBP18.23■□□□□ 0.51
VIM-201ENST00000224237 TAF1AQ15573 450 aaPredicted RBP18.23■□□□□ 0.51
VIM-201ENST00000224237 ASTLQ6HA08 431 aaPredicted RBP18.23■□□□□ 0.51
VIM-201ENST00000224237 GPR149Q86SP6 731 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 FGF13Q92913 245 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 SMARCD2Q92925 531 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 RPL10LQ96L21 214 aaKnown RBP18.23■□□□□ 0.51
VIM-201ENST00000224237 ASB16Q96NS5 453 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 FBXO5Q9UKT4 447 aa18.23■□□□□ 0.51
VIM-201ENST00000224237 MTO1Q9Y2Z2 717 aaKnown RBP18.23■□□□□ 0.51
VIM-201ENST00000224237 SOCS5O75159 536 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 RPP40O75818 363 aaKnown RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 F7P08709 466 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 TAC1P20366 129 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 BMP8BP34820 402 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 GRIA4P48058 902 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 CD151P48509 253 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 POLD2P49005 469 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 MPP1Q00013 466 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 DHCR24Q15392 516 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 ARMC12Q5T9G4 340 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 GET4Q7L5D6 327 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 GALNT7Q86SF2 657 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 AHI1Q8N157 1196 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.22■□□□□ 0.51
VIM-201ENST00000224237 OR2AP1Q8NGE2 309 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 OR6P1Q8NGX9 317 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 LRRC8CQ8TDW0 803 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 HDAC10Q969S8 669 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 DNAJC1Q96KC8 554 aaKnown RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 CEP44Q9C0F1 390 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 C12orf65Q9H3J6 166 aaKnown RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 NSUN3Q9H649 340 aaKnown RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 GDE1Q9NZC3 331 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 DCDC2Q9UHG0 476 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 KCTD3Q9Y597 815 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 SPO11Q9Y5K1 396 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 C2orf81A6NN90 581 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 ZNF821O75541 412 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 MPOP05164 745 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 GABRB3P28472 473 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 FOXN2P32314 431 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 CTSOP43234 321 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 STK19P49842 368 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 ARSDP51689 593 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 EPHB1P54762 984 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 SNRPD1P62314 119 aaKnown RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 BCL2L1Q07817 233 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 GRM3Q14832 879 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 QPCTQ16769 361 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 INSCQ1MX18 579 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 FAM78AQ5JUQ0 283 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 C22orf39Q6P5X5 142 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms