RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C SCS3P53012 380 aa9.66□□□□□ -0.86
BUD20YLR074C SOL4P53315 255 aa9.66□□□□□ -0.86
BUD20YLR074C RTP1Q12751 981 aa9.66□□□□□ -0.86
BUD20YLR074C RPS19AP07280 144 aaKnown RBP9.65□□□□□ -0.86
BUD20YLR074C RPS19BP07281 144 aaPredicted RBP9.65□□□□□ -0.86
BUD20YLR074C RAD18P10862 487 aa9.65□□□□□ -0.86
BUD20YLR074C SSF1P38789 453 aaPredicted RBP9.65□□□□□ -0.86
BUD20YLR074C YPL260WQ08977 551 aa9.65□□□□□ -0.86
BUD20YLR074C POX1P13711 748 aa9.64□□□□□ -0.87
BUD20YLR074C CAD1P24813 409 aaKnown RBP9.64□□□□□ -0.87
BUD20YLR074C VPS53P47061 822 aa9.64□□□□□ -0.87
BUD20YLR074C SLD5Q03406 294 aa9.64□□□□□ -0.87
BUD20YLR074C SKG3Q06315 1026 aa9.64□□□□□ -0.87
BUD20YLR074C RDH54P38086 958 aa9.63□□□□□ -0.87
BUD20YLR074C YDR461C-AQ2V2P7 80 aa9.63□□□□□ -0.87
BUD20YLR074C LAM4P38800 1345 aa9.62□□□□□ -0.87
BUD20YLR074C GPT2P36148 743 aa9.62□□□□□ -0.87
BUD20YLR074C YGL039WP53183 348 aaKnown RBP9.62□□□□□ -0.87
BUD20YLR074C YNL115CP53925 644 aa9.62□□□□□ -0.87
BUD20YLR074C PHR1P05066 565 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
BUD20YLR074C MCM4P30665 933 aaKnown RBP9.61□□□□□ -0.87
BUD20YLR074C GEF1P37020 779 aa9.61□□□□□ -0.87
BUD20YLR074C POA1P38218 177 aa9.61□□□□□ -0.87
BUD20YLR074C SAM1P10659 382 aaKnown RBP9.6□□□□□ -0.87
BUD20YLR074C BRL1P38770 471 aa9.6□□□□□ -0.87
BUD20YLR074C SGM1P47166 707 aa9.6□□□□□ -0.87
BUD20YLR074C VPS72Q03388 795 aa9.6□□□□□ -0.87
BUD20YLR074C ISA1Q07821 250 aaPredicted RBP9.6□□□□□ -0.87
BUD20YLR074C TIM23P32897 222 aa9.59□□□□□ -0.87
BUD20YLR074C SHP1P34223 423 aa9.59□□□□□ -0.87
BUD20YLR074C CSC1Q06538 782 aa9.59□□□□□ -0.87
BUD20YLR074C ERP3Q12403 225 aa9.59□□□□□ -0.87
BUD20YLR074C TRM11Q12463 433 aa9.59□□□□□ -0.87
BUD20YLR074C SAM2P19358 384 aaKnown RBP9.58□□□□□ -0.88
BUD20YLR074C CHS3P29465 1165 aa9.58□□□□□ -0.88
BUD20YLR074C TGL1P34163 548 aa9.58□□□□□ -0.88
BUD20YLR074C DBP7P36120 742 aaKnown RBP9.58□□□□□ -0.88
BUD20YLR074C DSF2P38213 736 aa9.58□□□□□ -0.88
BUD20YLR074C PHO88P38264 188 aaPredicted RBP9.58□□□□□ -0.88
BUD20YLR074C OYE3P41816 400 aaPredicted RBP9.58□□□□□ -0.88
BUD20YLR074C DAL5P15365 543 aa9.57□□□□□ -0.88
BUD20YLR074C TFC4P33339 1025 aa9.57□□□□□ -0.88
BUD20YLR074C POL32P47110 350 aa9.57□□□□□ -0.88
BUD20YLR074C TMA64Q04600 565 aaKnown RBP9.57□□□□□ -0.88
BUD20YLR074C YMR321CQ04898 105 aa9.57□□□□□ -0.88
BUD20YLR074C IDI1P15496 288 aa9.56□□□□□ -0.88
BUD20YLR074C GUA1P38625 525 aaKnown RBP9.56□□□□□ -0.88
BUD20YLR074C IOC3P43596 787 aa9.56□□□□□ -0.88
BUD20YLR074C EMI2Q04409 500 aaKnown RBP9.56□□□□□ -0.88
BUD20YLR074C SPH1Q06160 661 aa9.56□□□□□ -0.88
BUD20YLR074C MAK21Q12176 1025 aaKnown RBP9.56□□□□□ -0.88
BUD20YLR074C IRA2P19158 3079 aa9.56□□□□□ -0.88
BUD20YLR074C SUI2P20459 304 aaKnown RBP9.55□□□□□ -0.88
BUD20YLR074C DUR3P33413 735 aa9.55□□□□□ -0.88
BUD20YLR074C FMP10P40098 244 aa9.55□□□□□ -0.88
BUD20YLR074C AZR1P50080 613 aa9.55□□□□□ -0.88
BUD20YLR074C DUS3Q06053 668 aaKnown RBP9.55□□□□□ -0.88
BUD20YLR074C SPT2P06843 333 aaPredicted RBP9.54□□□□□ -0.88
BUD20YLR074C SWI6P09959 803 aa9.54□□□□□ -0.88
BUD20YLR074C TKL1P23254 680 aaKnown RBP9.54□□□□□ -0.88
BUD20YLR074C ART5P53244 586 aaKnown RBP9.54□□□□□ -0.88
BUD20YLR074C SNA3P14359 133 aa9.53□□□□□ -0.88
BUD20YLR074C URK1P27515 501 aa9.53□□□□□ -0.88
BUD20YLR074C SEC8P32855 1065 aa9.53□□□□□ -0.88
BUD20YLR074C MCR1P36060 302 aaKnown RBP9.53□□□□□ -0.88
BUD20YLR074C FLR1P38124 548 aa9.53□□□□□ -0.88
BUD20YLR074C UBP9P39967 754 aa9.53□□□□□ -0.88
BUD20YLR074C VID27P40157 782 aa9.53□□□□□ -0.88
BUD20YLR074C IRC8P47046 822 aa9.53□□□□□ -0.88
BUD20YLR074C INP52P50942 1183 aa9.53□□□□□ -0.88
BUD20YLR074C KTR3P38130 404 aaPredicted RBP9.52□□□□□ -0.89
BUD20YLR074C YNL034WP53963 612 aa9.52□□□□□ -0.89
BUD20YLR074C YNL018CP53976 612 aa9.52□□□□□ -0.89
BUD20YLR074C RAD59Q12223 238 aa9.52□□□□□ -0.89
BUD20YLR074C REG2P38232 338 aa9.51□□□□□ -0.89
BUD20YLR074C RTS1P38903 757 aa9.51□□□□□ -0.89
BUD20YLR074C TVP23P38962 199 aa9.51□□□□□ -0.89
BUD20YLR074C ALD5P40047 520 aaKnown RBP9.51□□□□□ -0.89
BUD20YLR074C HGH1P48362 394 aaKnown RBP9.51□□□□□ -0.89
BUD20YLR074C RAD61Q99359 647 aa9.51□□□□□ -0.89
BUD20YLR074C MAS2P11914 482 aa9.5□□□□□ -0.89
BUD20YLR074C ACE2P21192 770 aa9.5□□□□□ -0.89
BUD20YLR074C GCD7P32502 381 aaPredicted RBP9.5□□□□□ -0.89
BUD20YLR074C YHL050CP38721 697 aa9.5□□□□□ -0.89
BUD20YLR074C YMR147WP40218 223 aaKnown RBP9.5□□□□□ -0.89
BUD20YLR074C SPO74P45819 413 aa9.5□□□□□ -0.89
BUD20YLR074C YGL242CP53066 181 aa9.5□□□□□ -0.89
BUD20YLR074C MSC2Q03455 724 aa9.5□□□□□ -0.89
BUD20YLR074C ISW2Q08773 1120 aa9.5□□□□□ -0.89
BUD20YLR074C NCB2Q92317 146 aa9.5□□□□□ -0.89
BUD20YLR074C POL3P15436 1097 aa9.49□□□□□ -0.89
BUD20YLR074C INP51P40559 946 aaKnown RBP9.49□□□□□ -0.89
BUD20YLR074C HEH2Q03281 663 aa9.49□□□□□ -0.89
BUD20YLR074C KAR5Q04746 504 aa9.49□□□□□ -0.89
BUD20YLR074C ATG11Q12527 1178 aa9.49□□□□□ -0.89
BUD20YLR074C SYN8P31377 255 aa9.48□□□□□ -0.89
BUD20YLR074C FPR3P38911 411 aaKnown RBP9.48□□□□□ -0.89
BUD20YLR074C VPS8P39702 1274 aa9.48□□□□□ -0.89
BUD20YLR074C MET13P53128 600 aa9.48□□□□□ -0.89
BUD20YLR074C YGR035CP53222 116 aa9.48□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 246.1 ms