RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 AFF2P51816 1311 aa13.77□□□□□ -0.21
PHGDH-224ENST00000641711 ARHGEF25Q86VW2 580 aa13.77□□□□□ -0.21
PHGDH-224ENST00000641711 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
PHGDH-224ENST00000641711 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
PHGDH-224ENST00000641711 NGLY1Q96IV0 654 aa13.77□□□□□ -0.21
PHGDH-224ENST00000641711 C8orf37Q96NL8 207 aa13.77□□□□□ -0.21
PHGDH-224ENST00000641711 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
PHGDH-224ENST00000641711 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
PHGDH-224ENST00000641711 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
PHGDH-224ENST00000641711 ATRNO75882 1429 aa13.75□□□□□ -0.21
PHGDH-224ENST00000641711 ZC3H6P61129 1189 aaKnown RBP13.75□□□□□ -0.21
PHGDH-224ENST00000641711 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
PHGDH-224ENST00000641711 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-224ENST00000641711 INSRP06213 1382 aa13.74□□□□□ -0.21
PHGDH-224ENST00000641711 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
PHGDH-224ENST00000641711 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
PHGDH-224ENST00000641711 UNC5CLQ8IV45 518 aa13.74□□□□□ -0.21
PHGDH-224ENST00000641711 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
PHGDH-224ENST00000641711 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-224ENST00000641711 FLT4P35916 1363 aa13.73□□□□□ -0.21
PHGDH-224ENST00000641711 USP21Q9UK80 565 aa13.73□□□□□ -0.21
PHGDH-224ENST00000641711 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-224ENST00000641711 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
PHGDH-224ENST00000641711 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
PHGDH-224ENST00000641711 PEAK1Q9H792 1746 aa13.71□□□□□ -0.21
PHGDH-224ENST00000641711 NEFLP07196 543 aa13.71□□□□□ -0.21
PHGDH-224ENST00000641711 VPS72Q15906 364 aa13.71□□□□□ -0.21
PHGDH-224ENST00000641711 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
PHGDH-224ENST00000641711 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.22
PHGDH-224ENST00000641711 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
PHGDH-224ENST00000641711 IP6K1Q92551 441 aa13.7□□□□□ -0.22
PHGDH-224ENST00000641711 CRB1P82279 1406 aa13.7□□□□□ -0.22
PHGDH-224ENST00000641711 ERBB3P21860 1342 aa13.69□□□□□ -0.22
PHGDH-224ENST00000641711 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
PHGDH-224ENST00000641711 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
PHGDH-224ENST00000641711 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-224ENST00000641711 GLI3P10071 1580 aa13.69□□□□□ -0.22
PHGDH-224ENST00000641711 SOX12O15370 315 aa13.68□□□□□ -0.22
PHGDH-224ENST00000641711 HOXC9P31274 260 aa13.68□□□□□ -0.22
PHGDH-224ENST00000641711 AMPHP49418 695 aa13.68□□□□□ -0.22
PHGDH-224ENST00000641711 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
PHGDH-224ENST00000641711 FKBP8Q14318 412 aa13.68□□□□□ -0.22
PHGDH-224ENST00000641711 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
PHGDH-224ENST00000641711 PLEKHG2Q9H7P9 1386 aa13.67□□□□□ -0.22
PHGDH-224ENST00000641711 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
PHGDH-224ENST00000641711 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
PHGDH-224ENST00000641711 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
PHGDH-224ENST00000641711 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
PHGDH-224ENST00000641711 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-224ENST00000641711 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
PHGDH-224ENST00000641711 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
PHGDH-224ENST00000641711 PARP4Q9UKK3 1724 aaKnown RBP13.65□□□□□ -0.22
PHGDH-224ENST00000641711 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
PHGDH-224ENST00000641711 MSH5O43196 834 aa13.65□□□□□ -0.22
PHGDH-224ENST00000641711 EVA1CP58658 441 aa13.65□□□□□ -0.22
PHGDH-224ENST00000641711 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-224ENST00000641711 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
PHGDH-224ENST00000641711 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
PHGDH-224ENST00000641711 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 RXRBP28702 533 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
PHGDH-224ENST00000641711 CARD10Q9BWT7 1032 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
PHGDH-224ENST00000641711 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
PHGDH-224ENST00000641711 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-224ENST00000641711 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
PHGDH-224ENST00000641711 RGPD1P0DJD0 1748 aa13.62□□□□□ -0.23
PHGDH-224ENST00000641711 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-224ENST00000641711 CSB-PGBD3P0DP91 1061 aa13.62□□□□□ -0.23
PHGDH-224ENST00000641711 TCP11L2Q8N4U5 519 aa13.62□□□□□ -0.23
PHGDH-224ENST00000641711 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
PHGDH-224ENST00000641711 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-224ENST00000641711 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
PHGDH-224ENST00000641711 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
PHGDH-224ENST00000641711 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
PHGDH-224ENST00000641711 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
PHGDH-224ENST00000641711 DISP2A7MBM2 1401 aa13.61□□□□□ -0.23
PHGDH-224ENST00000641711 RGS12O14924 1447 aa13.61□□□□□ -0.23
PHGDH-224ENST00000641711 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-224ENST00000641711 FBLN1P23142 703 aa13.6□□□□□ -0.23
PHGDH-224ENST00000641711 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
PHGDH-224ENST00000641711 LRRC37A3O60309 1634 aa13.6□□□□□ -0.23
PHGDH-224ENST00000641711 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
PHGDH-224ENST00000641711 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
PHGDH-224ENST00000641711 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
PHGDH-224ENST00000641711 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-224ENST00000641711 MTHFSP49914 203 aa13.58□□□□□ -0.24
PHGDH-224ENST00000641711 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
PHGDH-224ENST00000641711 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
PHGDH-224ENST00000641711 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
PHGDH-224ENST00000641711 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.24
PHGDH-224ENST00000641711 TNS2Q63HR2 1409 aa13.57□□□□□ -0.24
PHGDH-224ENST00000641711 PKD1L3Q7Z443 1732 aa13.57□□□□□ -0.24
PHGDH-224ENST00000641711 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
PHGDH-224ENST00000641711 KDRP35968 1356 aa13.56□□□□□ -0.24
PHGDH-224ENST00000641711 IL2RBP14784 551 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms