RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 FSD1Q9BTV5 496 aa19.47■□□□□ 0.71
KCNMA1-261ENST00000639486 PPP4R3BQ5MIZ7 849 aa19.47■□□□□ 0.71
KCNMA1-261ENST00000639486 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
KCNMA1-261ENST00000639486 ZMYND15Q9H091 742 aa19.46■□□□□ 0.71
KCNMA1-261ENST00000639486 GTF2A1P52655 376 aaPredicted RBP19.46■□□□□ 0.71
KCNMA1-261ENST00000639486 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
KCNMA1-261ENST00000639486 CEP63Q96MT8 703 aa19.46■□□□□ 0.71
KCNMA1-261ENST00000639486 ERC1Q8IUD2 1116 aa19.45■□□□□ 0.7
KCNMA1-261ENST00000639486 IPO4Q8TEX9 1081 aaKnown RBP19.45■□□□□ 0.7
KCNMA1-261ENST00000639486 PPM1EQ8WY54 764 aa19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 ZHX1Q9UKY1 873 aaPredicted RBP19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 LARP1BQ659C4 914 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 STAMBPO95630 424 aa19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 KRT18P05783 430 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-261ENST00000639486 POLR3GO15318 223 aaPredicted RBP19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 TRIM22Q8IYM9 498 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 GCOM1H8Y6P7 765 aaPredicted RBP19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 MYZAPP0CAP1 466 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 CCDC183Q5T5S1 534 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 EFCAB2Q5VUJ9 269 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 CDKL5O76039 1030 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 MNAT1P51948 309 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 TSPYL4Q9UJ04 414 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 PLEKHH1Q9ULM0 1364 aa19.43■□□□□ 0.7
KCNMA1-261ENST00000639486 IVLP07476 585 aa19.42■□□□□ 0.7
KCNMA1-261ENST00000639486 TBC1D2BQ9UPU7 963 aa19.42■□□□□ 0.7
KCNMA1-261ENST00000639486 KIF3BO15066 747 aa19.42■□□□□ 0.7
KCNMA1-261ENST00000639486 GNAI3P08754 354 aa19.42■□□□□ 0.7
KCNMA1-261ENST00000639486 WWC2Q6AWC2 1192 aa19.42■□□□□ 0.7
KCNMA1-261ENST00000639486 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
KCNMA1-261ENST00000639486 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 WASHC2CQ9Y4E1 1318 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 NEUROD6Q96NK8 337 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 TAF4BQ92750 862 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 CFAP100Q494V2 611 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 NEMFO60524 1076 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 DESP17661 470 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 MPNDQ8N594 471 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
KCNMA1-261ENST00000639486 TANGO6Q9C0B7 1094 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 CCDC175P0C221 793 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 PRIMPOLQ96LW4 560 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 GIGYF2Q6Y7W6 1299 aaKnown RBP19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 DNAAF4Q8WXU2 420 aa19.4■□□□□ 0.7
KCNMA1-261ENST00000639486 RNF187Q5TA31 235 aaPredicted RBP19.39■□□□□ 0.7
KCNMA1-261ENST00000639486 CTR9Q6PD62 1173 aa19.39■□□□□ 0.7
KCNMA1-261ENST00000639486 CCDC83Q8IWF9 413 aa19.39■□□□□ 0.69
KCNMA1-261ENST00000639486 IFFO1Q0D2I5 559 aa19.38■□□□□ 0.69
KCNMA1-261ENST00000639486 SMC1AQ14683 1233 aaKnown RBP19.38■□□□□ 0.69
KCNMA1-261ENST00000639486 GNAI2P04899 355 aa19.38■□□□□ 0.69
KCNMA1-261ENST00000639486 SPECC1LQ69YQ0 1117 aa19.38■□□□□ 0.69
KCNMA1-261ENST00000639486 FHOD3Q2V2M9 1422 aa19.38■□□□□ 0.69
KCNMA1-261ENST00000639486 FEZ1Q99689 392 aa19.38■□□□□ 0.69
KCNMA1-261ENST00000639486 GTF2F1P35269 517 aaKnown RBP eCLIP19.37■□□□□ 0.69
KCNMA1-261ENST00000639486 SPA17Q15506 151 aa19.37■□□□□ 0.69
KCNMA1-261ENST00000639486 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
KCNMA1-261ENST00000639486 GSDMDP57764 484 aa19.36■□□□□ 0.69
KCNMA1-261ENST00000639486 GOLGA6L9A6NEM1 432 aa19.36■□□□□ 0.69
KCNMA1-261ENST00000639486 CFAP65Q6ZU64 1925 aaKnown RBP19.36■□□□□ 0.69
KCNMA1-261ENST00000639486 C16orf45Q96MC5 204 aaPredicted RBP19.36■□□□□ 0.69
KCNMA1-261ENST00000639486 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.36■□□□□ 0.69
KCNMA1-261ENST00000639486 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
KCNMA1-261ENST00000639486 VGFO15240 615 aaPredicted RBP19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 KRT222Q8N1A0 295 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 CCDC113Q9H0I3 377 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 CCDC30Q5VVM6 783 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 TNNT1P13805 278 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 RBM25P49756 843 aaKnown RBP19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 CLIP2Q9UDT6 1046 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 CFAP57Q96MR6 1250 aa19.35■□□□□ 0.69
KCNMA1-261ENST00000639486 HNRNPMP52272 730 aaKnown RBP eCLIP19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 BMS1Q14692 1282 aaKnown RBP19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 KIF21BO75037 1637 aa19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 PAF1Q8N7H5 531 aa19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 ZSCAN31Q96LW9 406 aaPredicted RBP19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 CEP131Q9UPN4 1083 aa19.34■□□□□ 0.69
KCNMA1-261ENST00000639486 LMAN1P49257 510 aa19.33■□□□□ 0.69
KCNMA1-261ENST00000639486 TMEM132AQ24JP5 1023 aa19.33■□□□□ 0.69
KCNMA1-261ENST00000639486 BBXQ8WY36 941 aaPredicted RBP19.33■□□□□ 0.69
KCNMA1-261ENST00000639486 FYB1O15117 783 aa19.33■□□□□ 0.69
KCNMA1-261ENST00000639486 TAOK3Q9H2K8 898 aa19.33■□□□□ 0.69
KCNMA1-261ENST00000639486 NOL7Q9UMY1 257 aaKnown RBP19.33■□□□□ 0.69
KCNMA1-261ENST00000639486 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.68
KCNMA1-261ENST00000639486 NAA15Q9BXJ9 866 aaKnown RBP19.33■□□□□ 0.68
KCNMA1-261ENST00000639486 SEPT11Q9NVA2 429 aaKnown RBP19.33■□□□□ 0.68
KCNMA1-261ENST00000639486 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
KCNMA1-261ENST00000639486 CTAGE5O15320 804 aa19.32■□□□□ 0.68
KCNMA1-261ENST00000639486 ANO10Q9NW15 660 aa19.32■□□□□ 0.68
KCNMA1-261ENST00000639486 SURF6O75683 361 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms