RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
KCNMA1-240ENST00000638575 GLI3P10071 1580 aa13.95□□□□□ -0.18
KCNMA1-240ENST00000638575 MYBBP1AQ9BQG0 1328 aaKnown RBP13.95□□□□□ -0.18
KCNMA1-240ENST00000638575 RRS1Q15050 365 aaKnown RBP13.95□□□□□ -0.18
KCNMA1-240ENST00000638575 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
KCNMA1-240ENST00000638575 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
KCNMA1-240ENST00000638575 HOXC9P31274 260 aa13.94□□□□□ -0.18
KCNMA1-240ENST00000638575 FLT4P35916 1363 aa13.94□□□□□ -0.18
KCNMA1-240ENST00000638575 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
KCNMA1-240ENST00000638575 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
KCNMA1-240ENST00000638575 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
KCNMA1-240ENST00000638575 IP6K1Q92551 441 aa13.93□□□□□ -0.18
KCNMA1-240ENST00000638575 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
KCNMA1-240ENST00000638575 ADAMTS7Q9UKP4 1686 aa13.92□□□□□ -0.18
KCNMA1-240ENST00000638575 MTHFSP49914 203 aa13.91□□□□□ -0.18
KCNMA1-240ENST00000638575 ATRNO75882 1429 aa13.91□□□□□ -0.18
KCNMA1-240ENST00000638575 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
KCNMA1-240ENST00000638575 IL13P35225 146 aa13.91□□□□□ -0.18
KCNMA1-240ENST00000638575 LRRC37A3O60309 1634 aa13.91□□□□□ -0.18
KCNMA1-240ENST00000638575 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
KCNMA1-240ENST00000638575 ERBB3P21860 1342 aa13.9□□□□□ -0.18
KCNMA1-240ENST00000638575 KDRP35968 1356 aa13.9□□□□□ -0.18
KCNMA1-240ENST00000638575 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
KCNMA1-240ENST00000638575 EP400Q96L91 3159 aa13.89□□□□□ -0.19
KCNMA1-240ENST00000638575 MIER1Q8N108 512 aa13.89□□□□□ -0.19
KCNMA1-240ENST00000638575 DLG5Q8TDM6 1919 aa13.89□□□□□ -0.19
KCNMA1-240ENST00000638575 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
KCNMA1-240ENST00000638575 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
KCNMA1-240ENST00000638575 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
KCNMA1-240ENST00000638575 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
KCNMA1-240ENST00000638575 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
KCNMA1-240ENST00000638575 BRWD3Q6RI45 1802 aa13.87□□□□□ -0.19
KCNMA1-240ENST00000638575 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
KCNMA1-240ENST00000638575 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
KCNMA1-240ENST00000638575 CRB1P82279 1406 aa13.85□□□□□ -0.19
KCNMA1-240ENST00000638575 PLEKHG2Q9H7P9 1386 aa13.85□□□□□ -0.19
KCNMA1-240ENST00000638575 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
KCNMA1-240ENST00000638575 MEGF6O75095 1541 aa13.84□□□□□ -0.19
KCNMA1-240ENST00000638575 SIPA1L3O60292 1781 aaPredicted RBP13.84□□□□□ -0.19
KCNMA1-240ENST00000638575 SOX12O15370 315 aa13.84□□□□□ -0.19
KCNMA1-240ENST00000638575 ANP32CO43423 234 aa13.84□□□□□ -0.19
KCNMA1-240ENST00000638575 TOGARAM1Q9Y4F4 1720 aa13.84□□□□□ -0.19
KCNMA1-240ENST00000638575 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
KCNMA1-240ENST00000638575 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 NUTM2AQ8IVF1 878 aaPredicted RBP13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 PRDM11Q9NQV5 511 aa13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 BTG4Q9NY30 223 aa13.83□□□□□ -0.2
KCNMA1-240ENST00000638575 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
KCNMA1-240ENST00000638575 EYA1Q99502 592 aa13.82□□□□□ -0.2
KCNMA1-240ENST00000638575 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
KCNMA1-240ENST00000638575 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
KCNMA1-240ENST00000638575 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
KCNMA1-240ENST00000638575 LARP1Q6PKG0 1096 aaKnown RBP13.81□□□□□ -0.2
KCNMA1-240ENST00000638575 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
KCNMA1-240ENST00000638575 AFF2P51816 1311 aa13.81□□□□□ -0.2
KCNMA1-240ENST00000638575 SPATA31A1Q5TZJ5 1347 aa13.81□□□□□ -0.2
KCNMA1-240ENST00000638575 SBF2Q86WG5 1849 aa13.81□□□□□ -0.2
KCNMA1-240ENST00000638575 SCN11AQ9UI33 1791 aa13.81□□□□□ -0.2
KCNMA1-240ENST00000638575 VPS72Q15906 364 aa13.8□□□□□ -0.2
KCNMA1-240ENST00000638575 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
KCNMA1-240ENST00000638575 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
KCNMA1-240ENST00000638575 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
KCNMA1-240ENST00000638575 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
KCNMA1-240ENST00000638575 AMPHP49418 695 aa13.79□□□□□ -0.2
KCNMA1-240ENST00000638575 CARD10Q9BWT7 1032 aa13.79□□□□□ -0.2
KCNMA1-240ENST00000638575 RSPH6AQ9H0K4 717 aa13.79□□□□□ -0.2
KCNMA1-240ENST00000638575 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
KCNMA1-240ENST00000638575 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-240ENST00000638575 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
KCNMA1-240ENST00000638575 PAPPAQ13219 1627 aa13.77□□□□□ -0.21
KCNMA1-240ENST00000638575 ITGB4P16144 1822 aa13.76□□□□□ -0.21
KCNMA1-240ENST00000638575 BARGINQ6ZT62 677 aa13.76□□□□□ -0.21
KCNMA1-240ENST00000638575 USP21Q9UK80 565 aa13.75□□□□□ -0.21
KCNMA1-240ENST00000638575 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
KCNMA1-240ENST00000638575 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
KCNMA1-240ENST00000638575 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
KCNMA1-240ENST00000638575 MRC1P22897 1456 aa13.74□□□□□ -0.21
KCNMA1-240ENST00000638575 DOT1LQ8TEK3 1739 aa13.74□□□□□ -0.21
KCNMA1-240ENST00000638575 NGLY1Q96IV0 654 aa13.74□□□□□ -0.21
KCNMA1-240ENST00000638575 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
KCNMA1-240ENST00000638575 USHBP1Q8N6Y0 703 aa13.74□□□□□ -0.21
KCNMA1-240ENST00000638575 RGS12O14924 1447 aa13.73□□□□□ -0.21
KCNMA1-240ENST00000638575 POTEAQ6S8J7 498 aa13.73□□□□□ -0.21
KCNMA1-240ENST00000638575 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
KCNMA1-240ENST00000638575 BCL9O00512 1426 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 NHSQ6T4R5 1651 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 UBR2Q8IWV8 1755 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 MRS2Q9HD23 443 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 FCHSD2O94868 740 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
KCNMA1-240ENST00000638575 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
KCNMA1-240ENST00000638575 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
KCNMA1-240ENST00000638575 LTV1Q96GA3 475 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms