RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 MAP3K4Q9Y6R4 1608 aa12.16□□□□□ -0.46
KCNMA1-228ENST00000638223 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
KCNMA1-228ENST00000638223 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
KCNMA1-228ENST00000638223 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
KCNMA1-228ENST00000638223 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-228ENST00000638223 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
KCNMA1-228ENST00000638223 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
KCNMA1-228ENST00000638223 MAST1Q9Y2H9 1570 aa12.15□□□□□ -0.46
KCNMA1-228ENST00000638223 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
KCNMA1-228ENST00000638223 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.47
KCNMA1-228ENST00000638223 APPP05067 770 aa12.15□□□□□ -0.47
KCNMA1-228ENST00000638223 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.47
KCNMA1-228ENST00000638223 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.47
KCNMA1-228ENST00000638223 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.47
KCNMA1-228ENST00000638223 STARD3NLO95772 234 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 IFNL2Q8IZJ0 200 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 SIL1Q9H173 461 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 GOLGA6L4A6NEF3 574 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 NSD2O96028 1365 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
KCNMA1-228ENST00000638223 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
KCNMA1-228ENST00000638223 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
KCNMA1-228ENST00000638223 ABCC1P33527 1531 aa12.13□□□□□ -0.47
KCNMA1-228ENST00000638223 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-228ENST00000638223 CLASRPQ8N2M8 674 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-228ENST00000638223 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-228ENST00000638223 GNAI2P04899 355 aa12.12□□□□□ -0.47
KCNMA1-228ENST00000638223 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
KCNMA1-228ENST00000638223 CNNM1Q9NRU3 951 aa12.12□□□□□ -0.47
KCNMA1-228ENST00000638223 ARHGEF5Q12774 1597 aa12.12□□□□□ -0.47
KCNMA1-228ENST00000638223 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
KCNMA1-228ENST00000638223 ANXA1P04083 346 aa12.11□□□□□ -0.47
KCNMA1-228ENST00000638223 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
KCNMA1-228ENST00000638223 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
KCNMA1-228ENST00000638223 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
KCNMA1-228ENST00000638223 GLI2P10070 1586 aa12.11□□□□□ -0.47
KCNMA1-228ENST00000638223 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
KCNMA1-228ENST00000638223 F6X3S4 739 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 PDE3AQ14432 1141 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 MAGI2Q86UL8 1455 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 RAD21O60216 631 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 CCT4P50991 539 aaKnown RBP12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 PDE4AP27815 886 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 IFT57Q9NWB7 429 aa12.1□□□□□ -0.47
KCNMA1-228ENST00000638223 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 ARAP3Q8WWN8 1544 aa12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 DDB1Q16531 1140 aa12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
KCNMA1-228ENST00000638223 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 EYA1Q99502 592 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 RUFY2Q8WXA3 655 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 ERC2O15083 957 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 MPHOSPH8Q99549 860 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 METP08581 1390 aa12.08□□□□□ -0.48
KCNMA1-228ENST00000638223 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
KCNMA1-228ENST00000638223 GPTP24298 496 aa12.07□□□□□ -0.48
KCNMA1-228ENST00000638223 TMEM94Q12767 1356 aa12.07□□□□□ -0.48
KCNMA1-228ENST00000638223 CCDC57Q2TAC2 916 aa12.07□□□□□ -0.48
KCNMA1-228ENST00000638223 TRPM2O94759 1503 aa12.07□□□□□ -0.48
KCNMA1-228ENST00000638223 FLT4P35916 1363 aa12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 ABCC11Q96J66 1382 aa12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 ZPR1O75312 459 aa12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 MVPQ14764 893 aaKnown RBP12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 FOXD4L5Q5VV16 416 aaPredicted RBP12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 FOXD4L4Q8WXT5 416 aaPredicted RBP12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 MYD88Q99836 296 aa12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
KCNMA1-228ENST00000638223 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 IL2RBP14784 551 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 HOXC9P31274 260 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 MBIPQ9NS73 344 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 ST18O60284 1047 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 FSD1Q9BTV5 496 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 REC8O95072 547 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 KDM6BO15054 1643 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms