RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CAVIN1Q6NZI2 390 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-253ENST00000637927 FIBPO43427 364 aa20.14■□□□□ 0.81
CACNA1A-253ENST00000637927 CABP4P57796 275 aa20.14■□□□□ 0.81
CACNA1A-253ENST00000637927 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 TRERF1Q96PN7 1200 aa20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 VTI1AQ96AJ9 217 aa20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 CCDC69A6NI79 296 aa20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 SART3Q15020 963 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 ERLIN2O94905 339 aa20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
CACNA1A-253ENST00000637927 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 TXLNAP40222 546 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 SMARCE1Q969G3 411 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 SLC3A2P08195 630 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 FILIP1LQ4L180 1135 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 ANKRD18AQ8IVF6 992 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 TMCO5BA8MYB1 307 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 CDCA7LQ96GN5 454 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
CACNA1A-253ENST00000637927 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-253ENST00000637927 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 PRAM1Q96QH2 718 aa20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 NAT10Q9H0A0 1025 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 TMCO4Q5TGY1 634 aa20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
CACNA1A-253ENST00000637927 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
CACNA1A-253ENST00000637927 ARL1P40616 181 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-253ENST00000637927 MMRN2Q9H8L6 949 aa20.09■□□□□ 0.81
CACNA1A-253ENST00000637927 CEP63Q96MT8 703 aa20.09■□□□□ 0.81
CACNA1A-253ENST00000637927 SMC1AQ14683 1233 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-253ENST00000637927 ZMYND15Q9H091 742 aa20.09■□□□□ 0.81
CACNA1A-253ENST00000637927 LEKR1Q6ZMV7 388 aa20.08■□□□□ 0.81
CACNA1A-253ENST00000637927 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
CACNA1A-253ENST00000637927 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-253ENST00000637927 SOGA3Q5TF21 947 aa20.08■□□□□ 0.8
CACNA1A-253ENST00000637927 ARHGAP5Q13017 1502 aa20.08■□□□□ 0.8
CACNA1A-253ENST00000637927 CDC45O75419 566 aa20.07■□□□□ 0.8
CACNA1A-253ENST00000637927 ERC1Q8IUD2 1116 aa20.07■□□□□ 0.8
CACNA1A-253ENST00000637927 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-253ENST00000637927 EZRP15311 586 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 STK38Q15208 465 aa20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 ZNF526Q8TF50 670 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 PSMA5P28066 241 aa20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 CCDC158Q5M9N0 1113 aa20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 RAI14Q9P0K7 980 aa20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 CFAP45Q9UL16 551 aa20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-253ENST00000637927 APBB1IPQ7Z5R6 666 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 CCDC82Q8N4S0 544 aa20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 SPTY2D1Q68D10 685 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 NEK4P51957 841 aa20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 KINO60870 393 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 ZNHIT6Q9NWK9 470 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 PLEKHO1Q53GL0 409 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-253ENST00000637927 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-253ENST00000637927 MIA2Q96PC5 1412 aa20.04■□□□□ 0.8
CACNA1A-253ENST00000637927 GRIPAP1Q4V328 841 aa20.04■□□□□ 0.8
CACNA1A-253ENST00000637927 FAM43AQ8N2R8 423 aa20.04■□□□□ 0.8
CACNA1A-253ENST00000637927 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-253ENST00000637927 DDX23Q9BUQ8 820 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-253ENST00000637927 SULT6B1Q6IMI4 303 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 MIS18AQ9NYP9 233 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 KIAA0754O94854 1291 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 PPFIBP1Q86W92 1011 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 ME1P48163 572 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 DYDC1Q8WWB3 177 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 MPHOSPH8Q99549 860 aa20.03■□□□□ 0.8
CACNA1A-253ENST00000637927 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 ABCF2Q9UG63 623 aa20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 TDO2P48775 406 aa20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 PUF60Q9UHX1 559 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 CDK19Q9BWU1 502 aa20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.02■□□□□ 0.8
CACNA1A-253ENST00000637927 BCAR3O75815 825 aa20.02■□□□□ 0.79
CACNA1A-253ENST00000637927 NUCB2P80303 420 aa20.02■□□□□ 0.79
CACNA1A-253ENST00000637927 TWISTNBQ3B726 338 aaPredicted RBP20.02■□□□□ 0.79
CACNA1A-253ENST00000637927 HOMER2Q9NSB8 354 aa20.01■□□□□ 0.79
CACNA1A-253ENST00000637927 KIAA1328Q86T90 577 aa20.01■□□□□ 0.79
CACNA1A-253ENST00000637927 CCDC178Q5BJE1 867 aa20.01■□□□□ 0.79
CACNA1A-253ENST00000637927 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
CACNA1A-253ENST00000637927 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
CACNA1A-253ENST00000637927 NASPP49321 788 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-253ENST00000637927 CCDC102AQ96A19 550 aa20■□□□□ 0.79
CACNA1A-253ENST00000637927 DPH6Q7L8W6 267 aa20■□□□□ 0.79
CACNA1A-253ENST00000637927 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
CACNA1A-253ENST00000637927 STAC3Q96MF2 364 aa20■□□□□ 0.79
CACNA1A-253ENST00000637927 MAP2K1Q02750 393 aaPredicted RBP20■□□□□ 0.79
CACNA1A-253ENST00000637927 ERCC4Q92889 916 aaPredicted RBP20■□□□□ 0.79
CACNA1A-253ENST00000637927 CAMK4Q16566 473 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms