RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 IP6K1Q92551 441 aa15.58■□□□□ 0.08
CLN6-223ENST00000637823 MED1Q15648 1581 aaPredicted RBP15.58■□□□□ 0.08
CLN6-223ENST00000637823 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
CLN6-223ENST00000637823 APAF1O14727 1248 aa15.56■□□□□ 0.08
CLN6-223ENST00000637823 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
CLN6-223ENST00000637823 AHDC1Q5TGY3 1603 aaPredicted RBP15.56■□□□□ 0.08
CLN6-223ENST00000637823 RGPD1P0DJD0 1748 aa15.56■□□□□ 0.08
CLN6-223ENST00000637823 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
CLN6-223ENST00000637823 RGPD5Q99666 1765 aa15.54■□□□□ 0.08
CLN6-223ENST00000637823 PDE3BQ13370 1112 aa15.54■□□□□ 0.08
CLN6-223ENST00000637823 TCP11L2Q8N4U5 519 aa15.54■□□□□ 0.08
CLN6-223ENST00000637823 LRRC59Q96AG4 307 aaKnown RBP15.54■□□□□ 0.08
CLN6-223ENST00000637823 RSPH6AQ9H0K4 717 aa15.54■□□□□ 0.08
CLN6-223ENST00000637823 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
CLN6-223ENST00000637823 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
CLN6-223ENST00000637823 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
CLN6-223ENST00000637823 PHLPP1O60346 1717 aa15.52■□□□□ 0.08
CLN6-223ENST00000637823 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.08
CLN6-223ENST00000637823 NEFMP07197 916 aa15.52■□□□□ 0.08
CLN6-223ENST00000637823 CERKQ8TCT0 537 aa15.52■□□□□ 0.08
CLN6-223ENST00000637823 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
CLN6-223ENST00000637823 COL18A1P39060 1754 aa15.52■□□□□ 0.07
CLN6-223ENST00000637823 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
CLN6-223ENST00000637823 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
CLN6-223ENST00000637823 HMOX1P09601 288 aa15.51■□□□□ 0.07
CLN6-223ENST00000637823 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
CLN6-223ENST00000637823 CABLES1Q8TDN4 633 aa15.51■□□□□ 0.07
CLN6-223ENST00000637823 ABCA3Q99758 1704 aa15.51■□□□□ 0.07
CLN6-223ENST00000637823 CPDO75976 1380 aa15.5■□□□□ 0.07
CLN6-223ENST00000637823 ABCC6O95255 1503 aa15.5■□□□□ 0.07
CLN6-223ENST00000637823 ZC3H6P61129 1189 aaKnown RBP15.5■□□□□ 0.07
CLN6-223ENST00000637823 RGPD2P0DJD1 1756 aa15.49■□□□□ 0.07
CLN6-223ENST00000637823 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
CLN6-223ENST00000637823 ZNF521Q96K83 1311 aa15.49■□□□□ 0.07
CLN6-223ENST00000637823 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
CLN6-223ENST00000637823 SULT6B1Q6IMI4 303 aa15.49■□□□□ 0.07
CLN6-223ENST00000637823 EYA1Q99502 592 aa15.49■□□□□ 0.07
CLN6-223ENST00000637823 TMPOP42166 694 aaKnown RBP15.48■□□□□ 0.07
CLN6-223ENST00000637823 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
CLN6-223ENST00000637823 LTV1Q96GA3 475 aaPredicted RBP15.48■□□□□ 0.07
CLN6-223ENST00000637823 DLG5Q8TDM6 1919 aa15.48■□□□□ 0.07
CLN6-223ENST00000637823 COL22A1Q8NFW1 1626 aaPredicted RBP15.47■□□□□ 0.07
CLN6-223ENST00000637823 HAP1P54257 671 aaPredicted RBP15.47■□□□□ 0.07
CLN6-223ENST00000637823 NEUROD2Q15784 382 aa15.47■□□□□ 0.07
CLN6-223ENST00000637823 KDRP35968 1356 aa15.47■□□□□ 0.07
CLN6-223ENST00000637823 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
CLN6-223ENST00000637823 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 AEBP1Q8IUX7 1158 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 ANKRD24Q8TF21 1146 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 PHACTR3Q96KR7 559 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 AXIN2Q9Y2T1 843 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 RRP7AQ9Y3A4 280 aaKnown RBP15.46■□□□□ 0.07
CLN6-223ENST00000637823 KIAA0232Q92628 1395 aa15.46■□□□□ 0.07
CLN6-223ENST00000637823 RIPK4P57078 832 aa15.45■□□□□ 0.06
CLN6-223ENST00000637823 WDR63Q8IWG1 891 aa15.45■□□□□ 0.06
CLN6-223ENST00000637823 FAM208AQ9UK61 1670 aaKnown RBP15.44■□□□□ 0.06
CLN6-223ENST00000637823 NBPF6Q5VWK0 638 aa15.43■□□□□ 0.06
CLN6-223ENST00000637823 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
CLN6-223ENST00000637823 NBPF4Q96M43 638 aa15.43■□□□□ 0.06
CLN6-223ENST00000637823 PRDM11Q9NQV5 511 aa15.43■□□□□ 0.06
CLN6-223ENST00000637823 CAMTA1Q9Y6Y1 1673 aa15.43■□□□□ 0.06
CLN6-223ENST00000637823 SLFN5Q08AF3 891 aa15.42■□□□□ 0.06
CLN6-223ENST00000637823 CHRNA2Q15822 529 aa15.42■□□□□ 0.06
CLN6-223ENST00000637823 TRMT2AQ8IZ69 625 aaKnown RBP15.42■□□□□ 0.06
CLN6-223ENST00000637823 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
CLN6-223ENST00000637823 ERBB3P21860 1342 aa15.42■□□□□ 0.06
CLN6-223ENST00000637823 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
CLN6-223ENST00000637823 E9PSI1 815 aa15.41■□□□□ 0.06
CLN6-223ENST00000637823 LMOD3Q0VAK6 560 aa15.41■□□□□ 0.06
CLN6-223ENST00000637823 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
CLN6-223ENST00000637823 USHBP1Q8N6Y0 703 aa15.39■□□□□ 0.05
CLN6-223ENST00000637823 IL16Q14005 1332 aa15.39■□□□□ 0.05
CLN6-223ENST00000637823 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.05
CLN6-223ENST00000637823 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
CLN6-223ENST00000637823 CALD1Q05682 793 aaKnown RBP15.38■□□□□ 0.05
CLN6-223ENST00000637823 DUSP27Q5VZP5 1158 aa15.38■□□□□ 0.05
CLN6-223ENST00000637823 GAS2L2Q8NHY3 880 aa15.38■□□□□ 0.05
CLN6-223ENST00000637823 CSB-PGBD3P0DP91 1061 aa15.37■□□□□ 0.05
CLN6-223ENST00000637823 MTHFSDQ2M296 383 aaKnown RBP15.37■□□□□ 0.05
CLN6-223ENST00000637823 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
CLN6-223ENST00000637823 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
CLN6-223ENST00000637823 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
CLN6-223ENST00000637823 HTATSF1O43719 755 aaKnown RBP15.35■□□□□ 0.05
CLN6-223ENST00000637823 EVA1CP58658 441 aa15.35■□□□□ 0.05
CLN6-223ENST00000637823 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
CLN6-223ENST00000637823 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
CLN6-223ENST00000637823 WDR17Q8IZU2 1322 aa15.35■□□□□ 0.05
CLN6-223ENST00000637823 COL5A2P05997 1499 aaPredicted RBP15.34■□□□□ 0.05
CLN6-223ENST00000637823 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
CLN6-223ENST00000637823 PLEKHG2Q9H7P9 1386 aa15.34■□□□□ 0.05
CLN6-223ENST00000637823 JCADQ9P266 1359 aa15.34■□□□□ 0.05
CLN6-223ENST00000637823 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
CLN6-223ENST00000637823 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
CLN6-223ENST00000637823 VIRMAQ69YN4 1812 aaKnown RBP15.32■□□□□ 0.04
CLN6-223ENST00000637823 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
CLN6-223ENST00000637823 SOCS7O14512 581 aa15.32■□□□□ 0.04
CLN6-223ENST00000637823 TATP17735 454 aaPredicted RBP15.32■□□□□ 0.04
CLN6-223ENST00000637823 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms