RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NSD2O96028 1365 aa23.52■■□□□ 1.36
CLN6-218ENST00000637223 COL14A1Q05707 1796 aaKnown RBP23.51■■□□□ 1.35
CLN6-218ENST00000637223 UNC5CLQ8IV45 518 aa23.51■■□□□ 1.35
CLN6-218ENST00000637223 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
CLN6-218ENST00000637223 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
CLN6-218ENST00000637223 PLCH1Q4KWH8 1693 aa23.49■■□□□ 1.35
CLN6-218ENST00000637223 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
CLN6-218ENST00000637223 AATKQ6ZMQ8 1374 aa23.49■■□□□ 1.35
CLN6-218ENST00000637223 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
CLN6-218ENST00000637223 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
CLN6-218ENST00000637223 GLI3P10071 1580 aa23.46■■□□□ 1.35
CLN6-218ENST00000637223 SEPT12Q8IYM1 358 aa23.46■■□□□ 1.35
CLN6-218ENST00000637223 STRN4Q9NRL3 753 aa23.46■■□□□ 1.35
CLN6-218ENST00000637223 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
CLN6-218ENST00000637223 CAMTA1Q9Y6Y1 1673 aa23.46■■□□□ 1.35
CLN6-218ENST00000637223 LMO7Q8WWI1 1683 aa23.44■■□□□ 1.34
CLN6-218ENST00000637223 PSDA5PKW4 1024 aaPredicted RBP23.44■■□□□ 1.34
CLN6-218ENST00000637223 AMPHP49418 695 aa23.44■■□□□ 1.34
CLN6-218ENST00000637223 EVA1CP58658 441 aa23.44■■□□□ 1.34
CLN6-218ENST00000637223 LRP5O75197 1615 aa23.44■■□□□ 1.34
CLN6-218ENST00000637223 NPC1L1Q9UHC9 1359 aa23.43■■□□□ 1.34
CLN6-218ENST00000637223 NWD2Q9ULI1 1742 aa23.43■■□□□ 1.34
CLN6-218ENST00000637223 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
CLN6-218ENST00000637223 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
CLN6-218ENST00000637223 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
CLN6-218ENST00000637223 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
CLN6-218ENST00000637223 ANKRD26Q9UPS8 1709 aa23.42■■□□□ 1.34
CLN6-218ENST00000637223 VPS72Q15906 364 aa23.42■■□□□ 1.34
CLN6-218ENST00000637223 COL5A2P05997 1499 aaPredicted RBP23.42■■□□□ 1.34
CLN6-218ENST00000637223 NRAPQ86VF7 1730 aa23.42■■□□□ 1.34
CLN6-218ENST00000637223 IP6K1Q92551 441 aa23.41■■□□□ 1.34
CLN6-218ENST00000637223 COL18A1P39060 1754 aa23.41■■□□□ 1.34
CLN6-218ENST00000637223 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
CLN6-218ENST00000637223 HOXC9P31274 260 aa23.4■■□□□ 1.34
CLN6-218ENST00000637223 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
CLN6-218ENST00000637223 LTN1O94822 1766 aa23.4■■□□□ 1.34
CLN6-218ENST00000637223 ABCC6O95255 1503 aa23.39■■□□□ 1.34
CLN6-218ENST00000637223 POLKQ9UBT6 870 aa23.39■■□□□ 1.33
CLN6-218ENST00000637223 KRT27Q7Z3Y8 459 aa23.38■■□□□ 1.33
CLN6-218ENST00000637223 RTL1A6NKG5 1358 aa23.38■■□□□ 1.33
CLN6-218ENST00000637223 CSB-PGBD3P0DP91 1061 aa23.37■■□□□ 1.33
CLN6-218ENST00000637223 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
CLN6-218ENST00000637223 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
CLN6-218ENST00000637223 FLT4P35916 1363 aa23.36■■□□□ 1.33
CLN6-218ENST00000637223 BAG6P46379 1132 aa23.35■■□□□ 1.33
CLN6-218ENST00000637223 HSP90AB2PQ58FF8 381 aa23.35■■□□□ 1.33
CLN6-218ENST00000637223 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
CLN6-218ENST00000637223 USP35Q9P2H5 1018 aa23.35■■□□□ 1.33
CLN6-218ENST00000637223 PEAK1Q9H792 1746 aa23.35■■□□□ 1.33
CLN6-218ENST00000637223 ERBB3P21860 1342 aa23.34■■□□□ 1.33
CLN6-218ENST00000637223 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
CLN6-218ENST00000637223 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
CLN6-218ENST00000637223 WDR17Q8IZU2 1322 aa23.34■■□□□ 1.33
CLN6-218ENST00000637223 ONECUT3O60422 494 aaPredicted RBP23.34■■□□□ 1.33
CLN6-218ENST00000637223 KIF24Q5T7B8 1368 aa23.34■■□□□ 1.33
CLN6-218ENST00000637223 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.32
CLN6-218ENST00000637223 INSRP06213 1382 aa23.32■■□□□ 1.32
CLN6-218ENST00000637223 CRB1P82279 1406 aa23.32■■□□□ 1.32
CLN6-218ENST00000637223 A0A0G2JS52 829 aa23.31■■□□□ 1.32
CLN6-218ENST00000637223 MYT1Q01538 1121 aa23.31■■□□□ 1.32
CLN6-218ENST00000637223 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
CLN6-218ENST00000637223 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
CLN6-218ENST00000637223 NLRP2Q9NX02 1062 aa23.3■■□□□ 1.32
CLN6-218ENST00000637223 MTHFSP49914 203 aa23.29■■□□□ 1.32
CLN6-218ENST00000637223 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
CLN6-218ENST00000637223 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
CLN6-218ENST00000637223 TCP11L2Q8N4U5 519 aa23.28■■□□□ 1.32
CLN6-218ENST00000637223 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
CLN6-218ENST00000637223 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.31
CLN6-218ENST00000637223 R3HDM1Q15032 1099 aaKnown RBP23.26■■□□□ 1.31
CLN6-218ENST00000637223 MAP2P11137 1827 aaKnown RBP23.26■■□□□ 1.31
CLN6-218ENST00000637223 PPP2R1AP30153 589 aa23.25■■□□□ 1.31
CLN6-218ENST00000637223 EIF4A2Q14240 407 aaKnown RBP23.24■■□□□ 1.31
CLN6-218ENST00000637223 THRAP3Q9Y2W1 955 aaKnown RBP23.24■■□□□ 1.31
CLN6-218ENST00000637223 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
CLN6-218ENST00000637223 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
CLN6-218ENST00000637223 RALBP1Q15311 655 aa23.22■■□□□ 1.31
CLN6-218ENST00000637223 BARGINQ6ZT62 677 aa23.22■■□□□ 1.31
CLN6-218ENST00000637223 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
CLN6-218ENST00000637223 FAM182BQ5T319 152 aa23.21■■□□□ 1.31
CLN6-218ENST00000637223 EYA1Q99502 592 aa23.18■■□□□ 1.3
CLN6-218ENST00000637223 FAM208AQ9UK61 1670 aaKnown RBP23.17■■□□□ 1.3
CLN6-218ENST00000637223 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
CLN6-218ENST00000637223 THSD7AQ9UPZ6 1657 aa23.16■■□□□ 1.3
CLN6-218ENST00000637223 YY1P25490 414 aa23.16■■□□□ 1.3
CLN6-218ENST00000637223 IL13P35225 146 aa23.16■■□□□ 1.3
CLN6-218ENST00000637223 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
CLN6-218ENST00000637223 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
CLN6-218ENST00000637223 IL2RBP14784 551 aa23.15■■□□□ 1.3
CLN6-218ENST00000637223 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
CLN6-218ENST00000637223 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
CLN6-218ENST00000637223 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.3
CLN6-218ENST00000637223 COL3A1P02461 1466 aaPredicted RBP23.14■■□□□ 1.29
CLN6-218ENST00000637223 CDCA7Q9BWT1 371 aaPredicted RBP23.14■■□□□ 1.29
CLN6-218ENST00000637223 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.29
CLN6-218ENST00000637223 IGSF1Q8N6C5 1336 aa23.12■■□□□ 1.29
CLN6-218ENST00000637223 RGPD1P0DJD0 1748 aa23.12■■□□□ 1.29
CLN6-218ENST00000637223 DDB1Q16531 1140 aa23.11■■□□□ 1.29
CLN6-218ENST00000637223 MEGF6O75095 1541 aa23.11■■□□□ 1.29
CLN6-218ENST00000637223 NCAPD2Q15021 1401 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms