RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CELA2BP08218 269 aaPredicted RBP5.05□□□□□ -1.6
VIM-210ENST00000637053 FSHRP23945 695 aa5.05□□□□□ -1.6
VIM-210ENST00000637053 CBLBQ13191 982 aa5.05□□□□□ -1.6
VIM-210ENST00000637053 MTMR2Q13614 643 aa5.05□□□□□ -1.6
VIM-210ENST00000637053 C1QTNF2Q9BXJ5 285 aa5.05□□□□□ -1.6
VIM-210ENST00000637053 CFAP99D6REC4 459 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 SPINT1O43278 529 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 GAS6Q14393 721 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 AGERQ15109 404 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 SV2AQ7L0J3 742 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 SH3RF1Q7Z6J0 888 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 Q8N3U1 123 aa5.04□□□□□ -1.6
VIM-210ENST00000637053 SENP3-EIF4A1A0A087X0R7 540 aa5.03□□□□□ -1.6
VIM-210ENST00000637053 SPDYE5A6NIY4 337 aa5.03□□□□□ -1.6
VIM-210ENST00000637053 BPHLQ86WA6 291 aaPredicted RBP5.03□□□□□ -1.6
VIM-210ENST00000637053 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
VIM-210ENST00000637053 PER1O15534 1290 aaPredicted RBP5.02□□□□□ -1.61
VIM-210ENST00000637053 SSTR3P32745 418 aaPredicted RBP5.02□□□□□ -1.61
VIM-210ENST00000637053 CTSOP43234 321 aaPredicted RBP5.02□□□□□ -1.61
VIM-210ENST00000637053 SRSF11Q05519 484 aaKnown RBP5.02□□□□□ -1.61
VIM-210ENST00000637053 TMEM132AQ24JP5 1023 aa5.02□□□□□ -1.61
VIM-210ENST00000637053 Q6ZVU0 165 aa5.02□□□□□ -1.61
VIM-210ENST00000637053 NPM2Q86SE8 214 aaKnown RBP5.02□□□□□ -1.61
VIM-210ENST00000637053 CCDC116Q8IYX3 515 aa5.02□□□□□ -1.61
VIM-210ENST00000637053 VSIG10Q8N0Z9 540 aa5.02□□□□□ -1.61
VIM-210ENST00000637053 CUEDC1Q9NWM3 386 aaPredicted RBP5.02□□□□□ -1.61
VIM-210ENST00000637053 PCDHB15Q9Y5E8 787 aa5.02□□□□□ -1.61
VIM-210ENST00000637053 EMILIN1Q9Y6C2 1016 aa5.02□□□□□ -1.61
VIM-210ENST00000637053 K7ELQ4 463 aaPredicted RBP5.01□□□□□ -1.61
VIM-210ENST00000637053 VASH1Q7L8A9 365 aaPredicted RBP5.01□□□□□ -1.61
VIM-210ENST00000637053 MAP4K5Q9Y4K4 846 aa5.01□□□□□ -1.61
VIM-210ENST00000637053 MAP3K10Q02779 954 aa5□□□□□ -1.61
VIM-210ENST00000637053 PPP1R26Q5T8A7 1209 aaPredicted RBP5□□□□□ -1.61
VIM-210ENST00000637053 TRMT44Q8IYL2 757 aaKnown RBP5□□□□□ -1.61
VIM-210ENST00000637053 AGBL1Q96MI9 1066 aa5□□□□□ -1.61
VIM-210ENST00000637053 SH3BP5LQ7L8J4 393 aa4.99□□□□□ -1.61
VIM-210ENST00000637053 C14orf37Q86TY3 774 aa4.99□□□□□ -1.61
VIM-210ENST00000637053 GALNT6Q8NCL4 622 aa4.99□□□□□ -1.61
VIM-210ENST00000637053 INSM2Q96T92 566 aaPredicted RBP4.99□□□□□ -1.61
VIM-210ENST00000637053 PHF20L1A8MW92 1017 aa4.98□□□□□ -1.61
VIM-210ENST00000637053 HRCP23327 699 aa4.98□□□□□ -1.61
VIM-210ENST00000637053 RSBN1LQ6PCB5 846 aaPredicted RBP4.98□□□□□ -1.61
VIM-210ENST00000637053 RNF217Q8TC41 542 aa4.98□□□□□ -1.61
VIM-210ENST00000637053 MAGEB6P1A0A0J9YX57 407 aa4.97□□□□□ -1.61
VIM-210ENST00000637053 BAG6P46379 1132 aa4.97□□□□□ -1.61
VIM-210ENST00000637053 RELBQ01201 579 aa4.97□□□□□ -1.61
VIM-210ENST00000637053 BEND7Q8N7W2 519 aaPredicted RBP4.97□□□□□ -1.61
VIM-210ENST00000637053 KRI1Q8N9T8 703 aaKnown RBP4.97□□□□□ -1.61
VIM-210ENST00000637053 CABLES1Q8TDN4 633 aa4.97□□□□□ -1.61
VIM-210ENST00000637053 KRBA1A5PL33 1030 aa4.96□□□□□ -1.62
VIM-210ENST00000637053 FURINP09958 794 aa4.96□□□□□ -1.62
VIM-210ENST00000637053 ERFEQ4G0M1 354 aa4.96□□□□□ -1.62
VIM-210ENST00000637053 ENAMQ9NRM1 1142 aa4.96□□□□□ -1.62
VIM-210ENST00000637053 IGF1RP08069 1367 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 GPR25O00155 361 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 GJA5P36382 358 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 ACDQ96AP0 544 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 BEGAINQ9BUH8 593 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 CARD14Q9BXL6 1004 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 TBC1D2Q9BYX2 928 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 ZNF395Q9H8N7 513 aaPredicted RBP4.95□□□□□ -1.62
VIM-210ENST00000637053 PGPEP1Q9NXJ5 209 aa4.95□□□□□ -1.62
VIM-210ENST00000637053 BCRP11274 1271 aa4.94□□□□□ -1.62
VIM-210ENST00000637053 FOXD4L5Q5VV16 416 aaPredicted RBP4.94□□□□□ -1.62
VIM-210ENST00000637053 POLMQ9NP87 494 aaPredicted RBP4.94□□□□□ -1.62
VIM-210ENST00000637053 ITGB7P26010 798 aa4.93□□□□□ -1.62
VIM-210ENST00000637053 SNRPNP63162 240 aaKnown RBP4.93□□□□□ -1.62
VIM-210ENST00000637053 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
VIM-210ENST00000637053 KDF1Q8NAX2 398 aaPredicted RBP4.93□□□□□ -1.62
VIM-210ENST00000637053 NEDD1Q8NHV4 660 aa4.93□□□□□ -1.62
VIM-210ENST00000637053 ZNF837Q96EG3 531 aaPredicted RBP4.93□□□□□ -1.62
VIM-210ENST00000637053 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
VIM-210ENST00000637053 ZBTB3Q9H5J0 574 aa4.93□□□□□ -1.62
VIM-210ENST00000637053 MBIPQ9NS73 344 aa4.93□□□□□ -1.62
VIM-210ENST00000637053 COL8A1P27658 744 aa4.92□□□□□ -1.62
VIM-210ENST00000637053 NBPF14Q5TI25 921 aa4.92□□□□□ -1.62
VIM-210ENST00000637053 GIGYF2Q6Y7W6 1299 aaKnown RBP4.92□□□□□ -1.62
VIM-210ENST00000637053 PODNQ7Z5L7 613 aa4.92□□□□□ -1.62
VIM-210ENST00000637053 ARMC2Q8NEN0 867 aa4.92□□□□□ -1.62
VIM-210ENST00000637053 KCTD15Q96SI1 283 aaPredicted RBP4.92□□□□□ -1.62
VIM-210ENST00000637053 DBN1Q16643 649 aa4.91□□□□□ -1.62
VIM-210ENST00000637053 INTS6LQ5JSJ4 861 aaKnown RBP4.91□□□□□ -1.62
VIM-210ENST00000637053 PRPF38BQ5VTL8 546 aaKnown RBP4.91□□□□□ -1.62
VIM-210ENST00000637053 KDM2AQ9Y2K7 1162 aa4.91□□□□□ -1.62
VIM-210ENST00000637053 RHOQP17081 205 aa4.9□□□□□ -1.63
VIM-210ENST00000637053 ADD1P35611 737 aaKnown RBP4.9□□□□□ -1.63
VIM-210ENST00000637053 TRIM26Q12899 539 aaPredicted RBP4.9□□□□□ -1.63
VIM-210ENST00000637053 TTLL12Q14166 644 aaPredicted RBP4.9□□□□□ -1.63
VIM-210ENST00000637053 QPCTQ16769 361 aa4.9□□□□□ -1.63
VIM-210ENST00000637053 CSPP1Q1MSJ5 1256 aa4.9□□□□□ -1.63
VIM-210ENST00000637053 RIC3Q7Z5B4 369 aa4.9□□□□□ -1.63
VIM-210ENST00000637053 TSC1Q92574 1164 aa4.9□□□□□ -1.63
VIM-210ENST00000637053 TMPRSS4Q9NRS4 437 aa4.9□□□□□ -1.63
VIM-210ENST00000637053 AMHR2Q16671 573 aa4.89□□□□□ -1.63
VIM-210ENST00000637053 TRIM22Q8IYM9 498 aa4.89□□□□□ -1.63
VIM-210ENST00000637053 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
VIM-210ENST00000637053 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
VIM-210ENST00000637053 OIP5O43482 229 aa4.88□□□□□ -1.63
VIM-210ENST00000637053 LILRA1O75019 489 aa4.88□□□□□ -1.63
VIM-210ENST00000637053 DHX9Q08211 1270 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms