RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 PARP4Q9UKK3 1724 aaKnown RBP17.37■□□□□ 0.37
LINC00963-217ENST00000624009 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■■■□ 25.4
LINC00963-217ENST00000624009 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
LINC00963-217ENST00000624009 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
LINC00963-217ENST00000624009 LARP1Q6PKG0 1096 aaKnown RBP17.35■□□□□ 0.37
LINC00963-217ENST00000624009 NME9Q86XW9 330 aa17.35■□□□□ 0.37
LINC00963-217ENST00000624009 WDR17Q8IZU2 1322 aa17.34■□□□□ 0.37
LINC00963-217ENST00000624009 WNK3Q9BYP7 1800 aa17.34■□□□□ 0.37
LINC00963-217ENST00000624009 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.36
LINC00963-217ENST00000624009 A0A0G2JS52 829 aa17.32■□□□□ 0.36
LINC00963-217ENST00000624009 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-217ENST00000624009 MYT1Q01538 1121 aa17.32■□□□□ 0.36
LINC00963-217ENST00000624009 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-217ENST00000624009 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
LINC00963-217ENST00000624009 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
LINC00963-217ENST00000624009 COG3Q96JB2 828 aa17.31■□□□□ 0.36
LINC00963-217ENST00000624009 FAM208AQ9UK61 1670 aaKnown RBP17.31■□□□□ 0.36
LINC00963-217ENST00000624009 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
LINC00963-217ENST00000624009 CARD10Q9BWT7 1032 aa17.29■□□□□ 0.36
LINC00963-217ENST00000624009 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
LINC00963-217ENST00000624009 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
LINC00963-217ENST00000624009 FAM196AQ6ZSG2 479 aa17.28■□□□□ 0.36
LINC00963-217ENST00000624009 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
LINC00963-217ENST00000624009 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
LINC00963-217ENST00000624009 ERBB3P21860 1342 aa17.27■□□□□ 0.36
LINC00963-217ENST00000624009 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
LINC00963-217ENST00000624009 FYB1O15117 783 aa17.27■□□□□ 0.36
LINC00963-217ENST00000624009 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.36
LINC00963-217ENST00000624009 DISP2A7MBM2 1401 aa17.27■□□□□ 0.35
LINC00963-217ENST00000624009 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
LINC00963-217ENST00000624009 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
LINC00963-217ENST00000624009 SOX12O15370 315 aa17.26■□□□□ 0.35
LINC00963-217ENST00000624009 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
LINC00963-217ENST00000624009 TNS1Q9HBL0 1735 aaKnown RBP17.25■□□□□ 0.35
LINC00963-217ENST00000624009 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
LINC00963-217ENST00000624009 IP6K1Q92551 441 aa17.25■□□□□ 0.35
LINC00963-217ENST00000624009 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
LINC00963-217ENST00000624009 BCL9O00512 1426 aa17.24■□□□□ 0.35
LINC00963-217ENST00000624009 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
LINC00963-217ENST00000624009 PEAK1Q9H792 1746 aa17.24■□□□□ 0.35
LINC00963-217ENST00000624009 SBF2Q86WG5 1849 aa17.24■□□□□ 0.35
LINC00963-217ENST00000624009 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
LINC00963-217ENST00000624009 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
LINC00963-217ENST00000624009 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
LINC00963-217ENST00000624009 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
LINC00963-217ENST00000624009 MAP3K19Q56UN5 1328 aa17.21■□□□□ 0.35
LINC00963-217ENST00000624009 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.35
LINC00963-217ENST00000624009 BAG6P46379 1132 aa17.21■□□□□ 0.35
LINC00963-217ENST00000624009 DDB1Q16531 1140 aa17.21■□□□□ 0.35
LINC00963-217ENST00000624009 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
LINC00963-217ENST00000624009 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
LINC00963-217ENST00000624009 ANKRD24Q8TF21 1146 aa17.2■□□□□ 0.34
LINC00963-217ENST00000624009 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
LINC00963-217ENST00000624009 HOXC9P31274 260 aa17.19■□□□□ 0.34
LINC00963-217ENST00000624009 RGPD3A6NKT7 1758 aaPredicted RBP17.19■□□□□ 0.34
LINC00963-217ENST00000624009 RGPD4Q7Z3J3 1758 aa17.19■□□□□ 0.34
LINC00963-217ENST00000624009 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
LINC00963-217ENST00000624009 AMPHP49418 695 aa17.18■□□□□ 0.34
LINC00963-217ENST00000624009 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
LINC00963-217ENST00000624009 NSD2O96028 1365 aa17.17■□□□□ 0.34
LINC00963-217ENST00000624009 NLRP2Q9NX02 1062 aa17.17■□□□□ 0.34
LINC00963-217ENST00000624009 FLT4P35916 1363 aa17.16■□□□□ 0.34
LINC00963-217ENST00000624009 EXOC5O00471 708 aa17.16■□□□□ 0.34
LINC00963-217ENST00000624009 IL2RBP14784 551 aa17.16■□□□□ 0.34
LINC00963-217ENST00000624009 FAM182BQ5T319 152 aa17.16■□□□□ 0.34
LINC00963-217ENST00000624009 INSRP06213 1382 aa17.15■□□□□ 0.34
LINC00963-217ENST00000624009 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
LINC00963-217ENST00000624009 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
LINC00963-217ENST00000624009 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
LINC00963-217ENST00000624009 TRIM37O94972 964 aa17.14■□□□□ 0.33
LINC00963-217ENST00000624009 PANK3Q9H999 370 aa17.13■□□□□ 0.33
LINC00963-217ENST00000624009 RREB1Q92766 1687 aa17.13■□□□□ 0.33
LINC00963-217ENST00000624009 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
LINC00963-217ENST00000624009 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
LINC00963-217ENST00000624009 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
LINC00963-217ENST00000624009 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
LINC00963-217ENST00000624009 KIF7Q2M1P5 1343 aa17.11■□□□□ 0.33
LINC00963-217ENST00000624009 FBLN1P23142 703 aa17.1■□□□□ 0.33
LINC00963-217ENST00000624009 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
LINC00963-217ENST00000624009 PLSCR1O15162 318 aa17.09■□□□□ 0.33
LINC00963-217ENST00000624009 APBA3O96018 575 aa17.09■□□□□ 0.33
LINC00963-217ENST00000624009 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
LINC00963-217ENST00000624009 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
LINC00963-217ENST00000624009 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
LINC00963-217ENST00000624009 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
LINC00963-217ENST00000624009 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
LINC00963-217ENST00000624009 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
LINC00963-217ENST00000624009 LTV1Q96GA3 475 aaPredicted RBP17.07■□□□□ 0.32
LINC00963-217ENST00000624009 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
LINC00963-217ENST00000624009 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
LINC00963-217ENST00000624009 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
LINC00963-217ENST00000624009 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
LINC00963-217ENST00000624009 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
LINC00963-217ENST00000624009 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
LINC00963-217ENST00000624009 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
LINC00963-217ENST00000624009 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
LINC00963-217ENST00000624009 MEGF6O75095 1541 aa17.04■□□□□ 0.32
LINC00963-217ENST00000624009 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
LINC00963-217ENST00000624009 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
LINC00963-217ENST00000624009 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms