RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 CCDC112Q8NEF3 446 aa17.76■□□□□ 0.43
C9orf139-202ENST00000623196 TSPYL1Q9H0U9 437 aa17.76■□□□□ 0.43
C9orf139-202ENST00000623196 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
C9orf139-202ENST00000623196 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
C9orf139-202ENST00000623196 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
C9orf139-202ENST00000623196 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
C9orf139-202ENST00000623196 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
C9orf139-202ENST00000623196 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
C9orf139-202ENST00000623196 DISP3Q9P2K9 1392 aa17.74■□□□□ 0.43
C9orf139-202ENST00000623196 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
C9orf139-202ENST00000623196 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
C9orf139-202ENST00000623196 ZFYVE27Q5T4F4 411 aa17.74■□□□□ 0.43
C9orf139-202ENST00000623196 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
C9orf139-202ENST00000623196 ESPNB1AK53 854 aa17.74■□□□□ 0.43
C9orf139-202ENST00000623196 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
C9orf139-202ENST00000623196 K7ELQ4 463 aaPredicted RBP17.73■□□□□ 0.43
C9orf139-202ENST00000623196 WDR63Q8IWG1 891 aa17.73■□□□□ 0.43
C9orf139-202ENST00000623196 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
C9orf139-202ENST00000623196 ATF7IPQ6VMQ6 1270 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 PRAM1Q96QH2 718 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 PKNOX2Q96KN3 472 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
C9orf139-202ENST00000623196 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
C9orf139-202ENST00000623196 TXLNAP40222 546 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 KRT85P78386 507 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
C9orf139-202ENST00000623196 GNAI2P04899 355 aa17.71■□□□□ 0.43
C9orf139-202ENST00000623196 BRPF1P55201 1214 aaPredicted RBP17.71■□□□□ 0.43
C9orf139-202ENST00000623196 CYP46A1Q9Y6A2 500 aa17.71■□□□□ 0.43
C9orf139-202ENST00000623196 MCM4P33991 863 aa17.71■□□□□ 0.43
C9orf139-202ENST00000623196 SERPINC1P01008 464 aa17.71■□□□□ 0.43
C9orf139-202ENST00000623196 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
C9orf139-202ENST00000623196 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
C9orf139-202ENST00000623196 CEBPZQ03701 1054 aaKnown RBP17.7■□□□□ 0.42
C9orf139-202ENST00000623196 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
C9orf139-202ENST00000623196 ZNHIT6Q9NWK9 470 aaKnown RBP17.7■□□□□ 0.42
C9orf139-202ENST00000623196 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
C9orf139-202ENST00000623196 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
C9orf139-202ENST00000623196 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
C9orf139-202ENST00000623196 NSD3Q9BZ95 1437 aa17.7■□□□□ 0.42
C9orf139-202ENST00000623196 ANKRD1Q15327 319 aa17.69■□□□□ 0.42
C9orf139-202ENST00000623196 DNAJC2Q99543 621 aaKnown RBP17.69■□□□□ 0.42
C9orf139-202ENST00000623196 FYB1O15117 783 aa17.69■□□□□ 0.42
C9orf139-202ENST00000623196 RBM33Q96EV2 1170 aaKnown RBP17.69■□□□□ 0.42
C9orf139-202ENST00000623196 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
C9orf139-202ENST00000623196 IGHDP01880 384 aa17.69■□□□□ 0.42
C9orf139-202ENST00000623196 MPNDQ8N594 471 aa17.68■□□□□ 0.42
C9orf139-202ENST00000623196 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
C9orf139-202ENST00000623196 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
C9orf139-202ENST00000623196 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
C9orf139-202ENST00000623196 TMEM57Q8N5G2 664 aa17.68■□□□□ 0.42
C9orf139-202ENST00000623196 CCDC141Q6ZP82 1450 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 ERLIN1O75477 346 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 ME1P48163 572 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 PPFIBP1Q86W92 1011 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 KDM4AO75164 1064 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 NLRP6P59044 892 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 UQCRHLA0A096LP55 91 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 UQCRHP07919 91 aa17.67■□□□□ 0.42
C9orf139-202ENST00000623196 SKIDA1Q1XH10 827 aa17.66■□□□□ 0.42
C9orf139-202ENST00000623196 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
C9orf139-202ENST00000623196 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
C9orf139-202ENST00000623196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.66■□□□□ 0.42
C9orf139-202ENST00000623196 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
C9orf139-202ENST00000623196 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
C9orf139-202ENST00000623196 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
C9orf139-202ENST00000623196 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
C9orf139-202ENST00000623196 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
C9orf139-202ENST00000623196 CDK5RAP3Q96JB5 506 aa17.66■□□□□ 0.42
C9orf139-202ENST00000623196 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
C9orf139-202ENST00000623196 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
C9orf139-202ENST00000623196 DACH1Q9UI36 760 aa17.65■□□□□ 0.42
C9orf139-202ENST00000623196 NUTM2GQ5VZR2 741 aa17.65■□□□□ 0.42
C9orf139-202ENST00000623196 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
C9orf139-202ENST00000623196 GOLGA6L10A6NI86 522 aa17.65■□□□□ 0.42
C9orf139-202ENST00000623196 ERLIN2O94905 339 aa17.65■□□□□ 0.42
C9orf139-202ENST00000623196 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
C9orf139-202ENST00000623196 KIAA0754O94854 1291 aa17.65■□□□□ 0.42
C9orf139-202ENST00000623196 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
C9orf139-202ENST00000623196 LRPPRCP42704 1394 aaKnown RBP17.64■□□□□ 0.41
C9orf139-202ENST00000623196 CCT4P50991 539 aaKnown RBP17.63■□□□□ 0.41
C9orf139-202ENST00000623196 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
C9orf139-202ENST00000623196 ZSCAN30Q86W11 494 aa17.63■□□□□ 0.41
C9orf139-202ENST00000623196 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
C9orf139-202ENST00000623196 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
C9orf139-202ENST00000623196 CEP57L1Q8IYX8 460 aa17.63■□□□□ 0.41
C9orf139-202ENST00000623196 SSH1Q8WYL5 1049 aa17.63■□□□□ 0.41
C9orf139-202ENST00000623196 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
C9orf139-202ENST00000623196 CBFA2T2O43439 604 aa17.62■□□□□ 0.41
C9orf139-202ENST00000623196 ADGRF5Q8IZF2 1346 aa17.62■□□□□ 0.41
C9orf139-202ENST00000623196 STIM1Q13586 685 aa17.62■□□□□ 0.41
C9orf139-202ENST00000623196 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
C9orf139-202ENST00000623196 SRCIN1Q9C0H9 1055 aa17.62■□□□□ 0.41
C9orf139-202ENST00000623196 STK3Q13188 491 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
C9orf139-202ENST00000623196 PDIA4P13667 645 aaKnown RBP17.61■□□□□ 0.41
C9orf139-202ENST00000623196 SYCP1Q15431 976 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms