RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 PLEKHG2Q9H7P9 1386 aa8.1□□□□□ -1.11
FMR1-217ENST00000620828 ITGB4P16144 1822 aa8.1□□□□□ -1.11
FMR1-217ENST00000620828 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
FMR1-217ENST00000620828 GCP02774 474 aa8.09□□□□□ -1.11
FMR1-217ENST00000620828 AXIN2Q9Y2T1 843 aa8.09□□□□□ -1.11
FMR1-217ENST00000620828 DOT1LQ8TEK3 1739 aa8.09□□□□□ -1.11
FMR1-217ENST00000620828 BTAF1O14981 1849 aa8.09□□□□□ -1.11
FMR1-217ENST00000620828 COL3A1P02461 1466 aaPredicted RBP8.09□□□□□ -1.11
FMR1-217ENST00000620828 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
FMR1-217ENST00000620828 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
FMR1-217ENST00000620828 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
FMR1-217ENST00000620828 SLC12A5Q9H2X9 1139 aa8.09□□□□□ -1.11
FMR1-217ENST00000620828 SIPA1L3O60292 1781 aaPredicted RBP8.09□□□□□ -1.11
FMR1-217ENST00000620828 TAF1LQ8IZX4 1826 aa8.08□□□□□ -1.12
FMR1-217ENST00000620828 ADAMTS2O95450 1211 aa8.08□□□□□ -1.12
FMR1-217ENST00000620828 SRPK2P78362 688 aaKnown RBP8.08□□□□□ -1.12
FMR1-217ENST00000620828 NGDNQ8NEJ9 315 aaKnown RBP8.08□□□□□ -1.12
FMR1-217ENST00000620828 ZRANB1Q9UGI0 708 aa8.08□□□□□ -1.12
FMR1-217ENST00000620828 PHF23Q9BUL5 403 aaPredicted RBP8.07□□□□□ -1.12
FMR1-217ENST00000620828 TNS2Q63HR2 1409 aa8.07□□□□□ -1.12
FMR1-217ENST00000620828 THRAP3Q9Y2W1 955 aaKnown RBP8.06□□□□□ -1.12
FMR1-217ENST00000620828 NGLY1Q96IV0 654 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 FYB1O15117 783 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 NLRP13Q86W25 1043 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 NPC1L1Q9UHC9 1359 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 BTG4Q9NY30 223 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 INSRP06213 1382 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 WDR17Q8IZU2 1322 aa8.06□□□□□ -1.12
FMR1-217ENST00000620828 NME9Q86XW9 330 aa8.05□□□□□ -1.12
FMR1-217ENST00000620828 PER1O15534 1290 aaPredicted RBP8.05□□□□□ -1.12
FMR1-217ENST00000620828 MEX3CQ5U5Q3 659 aaKnown RBP8.05□□□□□ -1.12
FMR1-217ENST00000620828 ABTB2Q8N961 1025 aa8.05□□□□□ -1.12
FMR1-217ENST00000620828 COL5A3P25940 1745 aaPredicted RBP8.05□□□□□ -1.12
FMR1-217ENST00000620828 HSPA5P11021 654 aaKnown RBP8.05□□□□□ -1.12
FMR1-217ENST00000620828 SCN11AQ9UI33 1791 aa8.05□□□□□ -1.12
FMR1-217ENST00000620828 UBR2Q8IWV8 1755 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 NSD3Q9BZ95 1437 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 NSD2O96028 1365 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 KCNH5Q8NCM2 988 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 ERBB3P21860 1342 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 CCDC7Q96M83 1385 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 TMF1P82094 1093 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 MEGF6O75095 1541 aa8.04□□□□□ -1.12
FMR1-217ENST00000620828 OVOS2A0A0G2JMS6 1433 aa8.03□□□□□ -1.12
FMR1-217ENST00000620828 LARP1Q6PKG0 1096 aaKnown RBP8.03□□□□□ -1.12
FMR1-217ENST00000620828 CARD10Q9BWT7 1032 aa8.02□□□□□ -1.13
FMR1-217ENST00000620828 C5P01031 1676 aa8.02□□□□□ -1.13
FMR1-217ENST00000620828 SEPT12Q8IYM1 358 aa8.02□□□□□ -1.13
FMR1-217ENST00000620828 KIF7Q2M1P5 1343 aa8.02□□□□□ -1.13
FMR1-217ENST00000620828 CCDC125Q86Z20 511 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 IP6K1Q92551 441 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 TERF2IPQ9NYB0 399 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 CHRNA2Q15822 529 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 MAP3K19Q56UN5 1328 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 NLRP6P59044 892 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 AMER1Q5JTC6 1135 aaPredicted RBP8.01□□□□□ -1.13
FMR1-217ENST00000620828 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 MRC1P22897 1456 aa8.01□□□□□ -1.13
FMR1-217ENST00000620828 WASHC2AQ641Q2 1341 aa8□□□□□ -1.13
FMR1-217ENST00000620828 TJP1Q07157 1748 aa8□□□□□ -1.13
FMR1-217ENST00000620828 HOXC9P31274 260 aa8□□□□□ -1.13
FMR1-217ENST00000620828 ZC3H6P61129 1189 aaKnown RBP7.99□□□□□ -1.13
FMR1-217ENST00000620828 HDGFL2Q7Z4V5 671 aaPredicted RBP7.99□□□□□ -1.13
FMR1-217ENST00000620828 TCP11L2Q8N4U5 519 aa7.99□□□□□ -1.13
FMR1-217ENST00000620828 PRDM11Q9NQV5 511 aa7.99□□□□□ -1.13
FMR1-217ENST00000620828 UBR3Q6ZT12 1888 aa7.99□□□□□ -1.13
FMR1-217ENST00000620828 EIF4G2P78344 907 aaKnown RBP eCLIP7.99□□□□□ -1.13
FMR1-217ENST00000620828 CDCA8Q53HL2 280 aa7.99□□□□□ -1.13
FMR1-217ENST00000620828 PAK3O75914 559 aaPredicted RBP7.99□□□□□ -1.13
FMR1-217ENST00000620828 KDRP35968 1356 aa7.98□□□□□ -1.13
FMR1-217ENST00000620828 PARD3Q8TEW0 1356 aa7.98□□□□□ -1.13
FMR1-217ENST00000620828 KIAA1551Q9HCM1 1747 aa7.98□□□□□ -1.13
FMR1-217ENST00000620828 FLT4P35916 1363 aa7.98□□□□□ -1.13
FMR1-217ENST00000620828 KRT27Q7Z3Y8 459 aa7.98□□□□□ -1.13
FMR1-217ENST00000620828 CAMKK2Q96RR4 588 aa7.98□□□□□ -1.13
FMR1-217ENST00000620828 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
FMR1-217ENST00000620828 MARCH10Q8NA82 808 aaPredicted RBP7.97□□□□□ -1.13
FMR1-217ENST00000620828 DLG5Q8TDM6 1919 aa7.97□□□□□ -1.13
FMR1-217ENST00000620828 KIF13BQ9NQT8 1826 aa7.96□□□□□ -1.13
FMR1-217ENST00000620828 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.13
FMR1-217ENST00000620828 CDCA7Q9BWT1 371 aaPredicted RBP7.96□□□□□ -1.13
FMR1-217ENST00000620828 POLKQ9UBT6 870 aa7.96□□□□□ -1.14
FMR1-217ENST00000620828 FBLN1P23142 703 aa7.95□□□□□ -1.14
FMR1-217ENST00000620828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.95□□□□□ -1.14
FMR1-217ENST00000620828 C4AP0C0L4 1744 aa7.95□□□□□ -1.14
FMR1-217ENST00000620828 C4BP0C0L5 1744 aa7.95□□□□□ -1.14
FMR1-217ENST00000620828 CGNL1Q0VF96 1302 aa7.95□□□□□ -1.14
FMR1-217ENST00000620828 IGSF1Q8N6C5 1336 aa7.94□□□□□ -1.14
FMR1-217ENST00000620828 ANKRD24Q8TF21 1146 aa7.94□□□□□ -1.14
FMR1-217ENST00000620828 KDM3BQ7LBC6 1761 aa7.94□□□□□ -1.14
FMR1-217ENST00000620828 MYT1Q01538 1121 aa7.94□□□□□ -1.14
FMR1-217ENST00000620828 NKX1-1Q15270 411 aaPredicted RBP7.94□□□□□ -1.14
FMR1-217ENST00000620828 PANK3Q9H999 370 aa7.94□□□□□ -1.14
FMR1-217ENST00000620828 NBPF6Q5VWK0 638 aa7.93□□□□□ -1.14
FMR1-217ENST00000620828 PTF1AQ7RTS3 328 aa7.93□□□□□ -1.14
FMR1-217ENST00000620828 PROM2Q8N271 834 aa7.93□□□□□ -1.14
FMR1-217ENST00000620828 NBPF4Q96M43 638 aa7.93□□□□□ -1.14
FMR1-217ENST00000620828 GGNBP2Q9H3C7 697 aa7.93□□□□□ -1.14
FMR1-217ENST00000620828 COG3Q96JB2 828 aa7.93□□□□□ -1.14
FMR1-217ENST00000620828 PLSCR1O15162 318 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms