RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
MUC1-229ENST00000620770 PRDM11Q9NQV5 511 aa18.42■□□□□ 0.54
MUC1-229ENST00000620770 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
MUC1-229ENST00000620770 ANKRD26Q9UPS8 1709 aa18.42■□□□□ 0.54
MUC1-229ENST00000620770 NFAT5O94916 1531 aa18.42■□□□□ 0.54
MUC1-229ENST00000620770 FBLN1P23142 703 aa18.41■□□□□ 0.54
MUC1-229ENST00000620770 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
MUC1-229ENST00000620770 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
MUC1-229ENST00000620770 CCDC125Q86Z20 511 aa18.41■□□□□ 0.54
MUC1-229ENST00000620770 SEPT12Q8IYM1 358 aa18.4■□□□□ 0.54
MUC1-229ENST00000620770 A0A0G2JS52 829 aa18.39■□□□□ 0.53
MUC1-229ENST00000620770 MYT1Q01538 1121 aa18.39■□□□□ 0.53
MUC1-229ENST00000620770 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
MUC1-229ENST00000620770 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
MUC1-229ENST00000620770 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
MUC1-229ENST00000620770 ONECUT3O60422 494 aaPredicted RBP18.37■□□□□ 0.53
MUC1-229ENST00000620770 CPDO75976 1380 aa18.37■□□□□ 0.53
MUC1-229ENST00000620770 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
MUC1-229ENST00000620770 LTN1O94822 1766 aa18.35■□□□□ 0.53
MUC1-229ENST00000620770 LMO7Q8WWI1 1683 aa18.35■□□□□ 0.53
MUC1-229ENST00000620770 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
MUC1-229ENST00000620770 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
MUC1-229ENST00000620770 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
MUC1-229ENST00000620770 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
MUC1-229ENST00000620770 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
MUC1-229ENST00000620770 RGPD1P0DJD0 1748 aa18.35■□□□□ 0.53
MUC1-229ENST00000620770 SPATA31A5Q5VU36 1347 aa18.34■□□□□ 0.53
MUC1-229ENST00000620770 SPATA31A7Q8IWB4 1347 aa18.34■□□□□ 0.53
MUC1-229ENST00000620770 AMPHP49418 695 aa18.33■□□□□ 0.52
MUC1-229ENST00000620770 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
MUC1-229ENST00000620770 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
MUC1-229ENST00000620770 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
MUC1-229ENST00000620770 STRN4Q9NRL3 753 aa18.32■□□□□ 0.52
MUC1-229ENST00000620770 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
MUC1-229ENST00000620770 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
MUC1-229ENST00000620770 CAMTA1Q9Y6Y1 1673 aa18.3■□□□□ 0.52
MUC1-229ENST00000620770 HOXC9P31274 260 aa18.29■□□□□ 0.52
MUC1-229ENST00000620770 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
MUC1-229ENST00000620770 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
MUC1-229ENST00000620770 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
MUC1-229ENST00000620770 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 COL18A1P39060 1754 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 EVA1CP58658 441 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 IP6K1Q92551 441 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 FLT4P35916 1363 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 PARD3Q8TEW0 1356 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 ABCC6O95255 1503 aa18.28■□□□□ 0.52
MUC1-229ENST00000620770 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
MUC1-229ENST00000620770 TNS1Q9HBL0 1735 aaKnown RBP18.27■□□□□ 0.52
MUC1-229ENST00000620770 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
MUC1-229ENST00000620770 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
MUC1-229ENST00000620770 RGPD5Q99666 1765 aa18.26■□□□□ 0.51
MUC1-229ENST00000620770 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
MUC1-229ENST00000620770 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
MUC1-229ENST00000620770 MTHFSP49914 203 aa18.25■□□□□ 0.51
MUC1-229ENST00000620770 HSP90AB2PQ58FF8 381 aa18.25■□□□□ 0.51
MUC1-229ENST00000620770 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
MUC1-229ENST00000620770 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
MUC1-229ENST00000620770 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
MUC1-229ENST00000620770 RALBP1Q15311 655 aa18.24■□□□□ 0.51
MUC1-229ENST00000620770 LARP1Q6PKG0 1096 aaKnown RBP18.24■□□□□ 0.51
MUC1-229ENST00000620770 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
MUC1-229ENST00000620770 KIF24Q5T7B8 1368 aa18.23■□□□□ 0.51
MUC1-229ENST00000620770 BAG6P46379 1132 aa18.23■□□□□ 0.51
MUC1-229ENST00000620770 USP35Q9P2H5 1018 aa18.23■□□□□ 0.51
MUC1-229ENST00000620770 INSRP06213 1382 aa18.22■□□□□ 0.51
MUC1-229ENST00000620770 ANP32CO43423 234 aa18.22■□□□□ 0.51
MUC1-229ENST00000620770 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
MUC1-229ENST00000620770 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
MUC1-229ENST00000620770 ERBB3P21860 1342 aa18.22■□□□□ 0.51
MUC1-229ENST00000620770 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
MUC1-229ENST00000620770 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
MUC1-229ENST00000620770 NLRP2Q9NX02 1062 aa18.21■□□□□ 0.51
MUC1-229ENST00000620770 CRB1P82279 1406 aa18.21■□□□□ 0.51
MUC1-229ENST00000620770 TCP11L2Q8N4U5 519 aa18.2■□□□□ 0.5
MUC1-229ENST00000620770 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
MUC1-229ENST00000620770 FAM182BQ5T319 152 aa18.19■□□□□ 0.5
MUC1-229ENST00000620770 THRAP3Q9Y2W1 955 aaKnown RBP18.19■□□□□ 0.5
MUC1-229ENST00000620770 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
MUC1-229ENST00000620770 EIF4A2Q14240 407 aaKnown RBP18.18■□□□□ 0.5
MUC1-229ENST00000620770 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
MUC1-229ENST00000620770 LRRC37A3O60309 1634 aa18.18■□□□□ 0.5
MUC1-229ENST00000620770 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
MUC1-229ENST00000620770 PDE3BQ13370 1112 aa18.16■□□□□ 0.5
MUC1-229ENST00000620770 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
MUC1-229ENST00000620770 FAM196AQ6ZSG2 479 aa18.16■□□□□ 0.5
MUC1-229ENST00000620770 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
MUC1-229ENST00000620770 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
MUC1-229ENST00000620770 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.5
MUC1-229ENST00000620770 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.49
MUC1-229ENST00000620770 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
MUC1-229ENST00000620770 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
MUC1-229ENST00000620770 CARD10Q9BWT7 1032 aa18.14■□□□□ 0.49
MUC1-229ENST00000620770 LRP5O75197 1615 aa18.13■□□□□ 0.49
MUC1-229ENST00000620770 RREB1Q92766 1687 aa18.13■□□□□ 0.49
MUC1-229ENST00000620770 SRCAPQ6ZRS2 3230 aa18.12■□□□□ 0.49
MUC1-229ENST00000620770 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
MUC1-229ENST00000620770 IL13P35225 146 aa18.12■□□□□ 0.49
MUC1-229ENST00000620770 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
MUC1-229ENST00000620770 EYA1Q99502 592 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms