RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
CLK4-215ENST00000611733 LTN1O94822 1766 aa16.23■□□□□ 0.19
CLK4-215ENST00000611733 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
CLK4-215ENST00000611733 FLT4P35916 1363 aa16.23■□□□□ 0.19
CLK4-215ENST00000611733 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
CLK4-215ENST00000611733 C8orf37Q96NL8 207 aa16.21■□□□□ 0.19
CLK4-215ENST00000611733 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
CLK4-215ENST00000611733 COL18A1P39060 1754 aa16.21■□□□□ 0.19
CLK4-215ENST00000611733 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
CLK4-215ENST00000611733 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
CLK4-215ENST00000611733 IL13P35225 146 aa16.2■□□□□ 0.18
CLK4-215ENST00000611733 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
CLK4-215ENST00000611733 CDK12Q9NYV4 1490 aaPredicted RBP16.2■□□□□ 0.18
CLK4-215ENST00000611733 INSRP06213 1382 aa16.2■□□□□ 0.18
CLK4-215ENST00000611733 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
CLK4-215ENST00000611733 DIAPH1O60610 1272 aaKnown RBP16.19■□□□□ 0.18
CLK4-215ENST00000611733 ANKRD24Q8TF21 1146 aa16.19■□□□□ 0.18
CLK4-215ENST00000611733 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
CLK4-215ENST00000611733 KIF24Q5T7B8 1368 aa16.19■□□□□ 0.18
CLK4-215ENST00000611733 NGLY1Q96IV0 654 aa16.19■□□□□ 0.18
CLK4-215ENST00000611733 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
CLK4-215ENST00000611733 MEX3CQ5U5Q3 659 aaKnown RBP16.18■□□□□ 0.18
CLK4-215ENST00000611733 STRN4Q9NRL3 753 aa16.18■□□□□ 0.18
CLK4-215ENST00000611733 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
CLK4-215ENST00000611733 LMO7Q8WWI1 1683 aa16.17■□□□□ 0.18
CLK4-215ENST00000611733 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
CLK4-215ENST00000611733 NBPF6Q5VWK0 638 aa16.16■□□□□ 0.18
CLK4-215ENST00000611733 NBPF4Q96M43 638 aa16.16■□□□□ 0.18
CLK4-215ENST00000611733 EYA1Q99502 592 aa16.16■□□□□ 0.18
CLK4-215ENST00000611733 ERBB3P21860 1342 aa16.16■□□□□ 0.18
CLK4-215ENST00000611733 LARP1Q6PKG0 1096 aaKnown RBP16.16■□□□□ 0.18
CLK4-215ENST00000611733 USHBP1Q8N6Y0 703 aa16.16■□□□□ 0.18
CLK4-215ENST00000611733 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
CLK4-215ENST00000611733 EVA1CP58658 441 aa16.15■□□□□ 0.18
CLK4-215ENST00000611733 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
CLK4-215ENST00000611733 COL5A2P05997 1499 aaPredicted RBP16.14■□□□□ 0.17
CLK4-215ENST00000611733 CSB-PGBD3P0DP91 1061 aa16.14■□□□□ 0.17
CLK4-215ENST00000611733 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
CLK4-215ENST00000611733 FNBP4Q8N3X1 1017 aaPredicted RBP16.14■□□□□ 0.17
CLK4-215ENST00000611733 ADAMTS8Q9UP79 889 aa16.14■□□□□ 0.17
CLK4-215ENST00000611733 SLIT2O94813 1529 aa16.14■□□□□ 0.17
CLK4-215ENST00000611733 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
CLK4-215ENST00000611733 HMOX1P09601 288 aa16.13■□□□□ 0.17
CLK4-215ENST00000611733 U2AF1L5P0DN76 240 aaPredicted RBP16.13■□□□□ 0.17
CLK4-215ENST00000611733 U2AF1Q01081 240 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLK4-215ENST00000611733 NLRP2Q9NX02 1062 aa16.13■□□□□ 0.17
CLK4-215ENST00000611733 BCL9LQ86UU0 1499 aa16.13■□□□□ 0.17
CLK4-215ENST00000611733 AFF2P51816 1311 aa16.12■□□□□ 0.17
CLK4-215ENST00000611733 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
CLK4-215ENST00000611733 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 USP21Q9UK80 565 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 ABCC6O95255 1503 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLK4-215ENST00000611733 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
CLK4-215ENST00000611733 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
CLK4-215ENST00000611733 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
CLK4-215ENST00000611733 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
CLK4-215ENST00000611733 RGPD1P0DJD0 1748 aa16.07■□□□□ 0.16
CLK4-215ENST00000611733 NRAPQ86VF7 1730 aa16.07■□□□□ 0.16
CLK4-215ENST00000611733 RSPH6AQ9H0K4 717 aa16.07■□□□□ 0.16
CLK4-215ENST00000611733 CARD10Q9BWT7 1032 aa16.07■□□□□ 0.16
CLK4-215ENST00000611733 CCDC9Q9Y3X0 531 aaKnown RBP16.07■□□□□ 0.16
CLK4-215ENST00000611733 CRB1P82279 1406 aa16.06■□□□□ 0.16
CLK4-215ENST00000611733 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
CLK4-215ENST00000611733 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
CLK4-215ENST00000611733 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
CLK4-215ENST00000611733 VPS72Q15906 364 aa16.05■□□□□ 0.16
CLK4-215ENST00000611733 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
CLK4-215ENST00000611733 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
CLK4-215ENST00000611733 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
CLK4-215ENST00000611733 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
CLK4-215ENST00000611733 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
CLK4-215ENST00000611733 FCHSD2O94868 740 aa16.04■□□□□ 0.16
CLK4-215ENST00000611733 QTRT2Q9H974 415 aaKnown RBP16.04■□□□□ 0.16
CLK4-215ENST00000611733 KDRP35968 1356 aa16.04■□□□□ 0.16
CLK4-215ENST00000611733 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
CLK4-215ENST00000611733 FAM208AQ9UK61 1670 aaKnown RBP16.03■□□□□ 0.16
CLK4-215ENST00000611733 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
CLK4-215ENST00000611733 MEGF6O75095 1541 aa16.01■□□□□ 0.15
CLK4-215ENST00000611733 GJD4Q96KN9 370 aaPredicted RBP16.01■□□□□ 0.15
CLK4-215ENST00000611733 TRPC5Q9UL62 973 aaPredicted RBP16.01■□□□□ 0.15
CLK4-215ENST00000611733 ATRNO75882 1429 aa16.01■□□□□ 0.15
CLK4-215ENST00000611733 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
CLK4-215ENST00000611733 RUNDC1Q96C34 613 aa16■□□□□ 0.15
CLK4-215ENST00000611733 APAF1O14727 1248 aa16■□□□□ 0.15
CLK4-215ENST00000611733 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
CLK4-215ENST00000611733 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
CLK4-215ENST00000611733 IL2RBP14784 551 aa15.99■□□□□ 0.15
CLK4-215ENST00000611733 MTHFSDQ2M296 383 aaKnown RBP15.99■□□□□ 0.15
CLK4-215ENST00000611733 TATP17735 454 aaPredicted RBP15.99■□□□□ 0.15
CLK4-215ENST00000611733 ZNF772Q68DY9 489 aaPredicted RBP15.99■□□□□ 0.15
CLK4-215ENST00000611733 POTEAQ6S8J7 498 aa15.99■□□□□ 0.15
CLK4-215ENST00000611733 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
CLK4-215ENST00000611733 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
CLK4-215ENST00000611733 NEUROD2Q15784 382 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms