RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 NPAS3Q8IXF0 933 aa6.52□□□□□ -1.37
ZEB1-224ENST00000606161 AP1G2O75843 785 aa6.51□□□□□ -1.37
ZEB1-224ENST00000606161 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
ZEB1-224ENST00000606161 CCDC116Q8IYX3 515 aa6.51□□□□□ -1.37
ZEB1-224ENST00000606161 ARHGAP9Q9BRR9 750 aa6.51□□□□□ -1.37
ZEB1-224ENST00000606161 CBLBQ13191 982 aa6.5□□□□□ -1.37
ZEB1-224ENST00000606161 SLC16A10Q8TF71 515 aa6.5□□□□□ -1.37
ZEB1-224ENST00000606161 DNMT3LQ9UJW3 386 aa6.5□□□□□ -1.37
ZEB1-224ENST00000606161 SOS2Q07890 1332 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-224ENST00000606161 BMP2P12643 396 aa6.49□□□□□ -1.37
ZEB1-224ENST00000606161 RFC5P40937 340 aa6.49□□□□□ -1.37
ZEB1-224ENST00000606161 INSM1Q01101 510 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-224ENST00000606161 PPP1R26Q5T8A7 1209 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-224ENST00000606161 IRF7Q92985 503 aa6.49□□□□□ -1.37
ZEB1-224ENST00000606161 STK17AQ9UEE5 414 aa6.49□□□□□ -1.37
ZEB1-224ENST00000606161 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
ZEB1-224ENST00000606161 INTS6LQ5JSJ4 861 aaKnown RBP6.48□□□□□ -1.37
ZEB1-224ENST00000606161 KCTD15Q96SI1 283 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-224ENST00000606161 TRIM34Q9BYJ4 488 aa6.48□□□□□ -1.37
ZEB1-224ENST00000606161 EMILIN1Q9Y6C2 1016 aa6.48□□□□□ -1.37
ZEB1-224ENST00000606161 MAN1A2O60476 641 aa6.47□□□□□ -1.37
ZEB1-224ENST00000606161 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
ZEB1-224ENST00000606161 Q6ZVU0 165 aa6.47□□□□□ -1.37
ZEB1-224ENST00000606161 ADAM32Q8TC27 787 aa6.47□□□□□ -1.37
ZEB1-224ENST00000606161 SLC10A4Q96EP9 437 aa6.47□□□□□ -1.37
ZEB1-224ENST00000606161 ATP1B4Q9UN42 357 aaPredicted RBP6.46□□□□□ -1.38
ZEB1-224ENST00000606161 PPFIA3O75145 1194 aa6.45□□□□□ -1.38
ZEB1-224ENST00000606161 ZBTB33Q86T24 672 aa6.45□□□□□ -1.38
ZEB1-224ENST00000606161 TSEN34Q9BSV6 310 aaKnown RBP6.45□□□□□ -1.38
ZEB1-224ENST00000606161 TMPRSS4Q9NRS4 437 aa6.45□□□□□ -1.38
ZEB1-224ENST00000606161 GPSM3Q9Y4H4 160 aa6.45□□□□□ -1.38
ZEB1-224ENST00000606161 UPP2O95045 317 aa6.44□□□□□ -1.38
ZEB1-224ENST00000606161 PTK2Q05397 1052 aa6.44□□□□□ -1.38
ZEB1-224ENST00000606161 ERICH6Q7L0X2 663 aa6.44□□□□□ -1.38
ZEB1-224ENST00000606161 GJD4Q96KN9 370 aaPredicted RBP6.44□□□□□ -1.38
ZEB1-224ENST00000606161 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
ZEB1-224ENST00000606161 GOPCQ9HD26 462 aa6.44□□□□□ -1.38
ZEB1-224ENST00000606161 CDV3Q9UKY7 258 aaKnown RBP6.44□□□□□ -1.38
ZEB1-224ENST00000606161 TTLL8A6PVC2 850 aa6.43□□□□□ -1.38
ZEB1-224ENST00000606161 SPINT1O43278 529 aa6.43□□□□□ -1.38
ZEB1-224ENST00000606161 BRPF1P55201 1214 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-224ENST00000606161 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
ZEB1-224ENST00000606161 FIGNL2A6NMB9 653 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 ESPNB1AK53 854 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 GPR37L1O60883 481 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 LILRA1O75019 489 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 NEUROD2Q15784 382 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 KDF1Q8NAX2 398 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-224ENST00000606161 ZSCAN1Q8NBB4 408 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 ZNF784Q8NCA9 323 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-224ENST00000606161 IL27Q8NEV9 243 aa6.42□□□□□ -1.38
ZEB1-224ENST00000606161 CTSOP43234 321 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-224ENST00000606161 RAB15P59190 212 aa6.41□□□□□ -1.38
ZEB1-224ENST00000606161 KRT76Q01546 638 aa6.41□□□□□ -1.38
ZEB1-224ENST00000606161 PTSQ03393 145 aa6.41□□□□□ -1.38
ZEB1-224ENST00000606161 GPR161Q8N6U8 529 aaKnown RBP6.41□□□□□ -1.38
ZEB1-224ENST00000606161 PCMTD1Q96MG8 357 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-224ENST00000606161 ERVH48-1M5A8F1 160 aa6.4□□□□□ -1.38
ZEB1-224ENST00000606161 ADD1P35611 737 aaKnown RBP6.4□□□□□ -1.38
ZEB1-224ENST00000606161 RELBQ01201 579 aa6.4□□□□□ -1.38
ZEB1-224ENST00000606161 DHX9Q08211 1270 aaKnown RBP6.4□□□□□ -1.38
ZEB1-224ENST00000606161 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.4□□□□□ -1.38
ZEB1-224ENST00000606161 INSM2Q96T92 566 aaPredicted RBP6.4□□□□□ -1.38
ZEB1-224ENST00000606161 NBPF20Q3BBV1 942 aa6.39□□□□□ -1.39
ZEB1-224ENST00000606161 SLC35F4A4IF30 521 aa6.38□□□□□ -1.39
ZEB1-224ENST00000606161 ADH1AP07327 375 aa6.38□□□□□ -1.39
ZEB1-224ENST00000606161 FBXO45P0C2W1 286 aa6.38□□□□□ -1.39
ZEB1-224ENST00000606161 TMEM259Q4ZIN3 620 aa6.38□□□□□ -1.39
ZEB1-224ENST00000606161 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-224ENST00000606161 DZIP3Q86Y13 1208 aaKnown RBP6.38□□□□□ -1.39
ZEB1-224ENST00000606161 RNF217Q8TC41 542 aa6.38□□□□□ -1.39
ZEB1-224ENST00000606161 ZNF395Q9H8N7 513 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-224ENST00000606161 SENP3-EIF4A1A0A087X0R7 540 aa6.37□□□□□ -1.39
ZEB1-224ENST00000606161 CCDC155Q8N6L0 562 aa6.37□□□□□ -1.39
ZEB1-224ENST00000606161 ZBBXA8MT70 800 aa6.36□□□□□ -1.39
ZEB1-224ENST00000606161 PNMA1Q8ND90 353 aa6.36□□□□□ -1.39
ZEB1-224ENST00000606161 CYLDQ9NQC7 956 aa6.36□□□□□ -1.39
ZEB1-224ENST00000606161 GIGYF1O75420 1035 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-224ENST00000606161 RNFT1Q5M7Z0 435 aa6.35□□□□□ -1.39
ZEB1-224ENST00000606161 MTMR14Q8NCE2 650 aa6.35□□□□□ -1.39
ZEB1-224ENST00000606161 POLMQ9NP87 494 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-224ENST00000606161 PTGIRP43119 386 aa6.34□□□□□ -1.39
ZEB1-224ENST00000606161 NANOS1Q8WY41 292 aaKnown RBP6.34□□□□□ -1.39
ZEB1-224ENST00000606161 PCDHB9Q9Y5E1 797 aa6.34□□□□□ -1.39
ZEB1-224ENST00000606161 ITGA6P23229 1130 aa6.33□□□□□ -1.4
ZEB1-224ENST00000606161 SEPT12Q8IYM1 358 aa6.33□□□□□ -1.4
ZEB1-224ENST00000606161 CNTNAP3BQ96NU0 1288 aa6.33□□□□□ -1.4
ZEB1-224ENST00000606161 CNTNAP3Q9BZ76 1288 aa6.33□□□□□ -1.4
ZEB1-224ENST00000606161 SNRKQ9NRH2 765 aa6.33□□□□□ -1.4
ZEB1-224ENST00000606161 FAM181BA6NEQ2 426 aa6.32□□□□□ -1.4
ZEB1-224ENST00000606161 SCTRP47872 440 aa6.32□□□□□ -1.4
ZEB1-224ENST00000606161 COL25A1Q9BXS0 654 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-224ENST00000606161 CUEDC1Q9NWM3 386 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-224ENST00000606161 SOCS7O14512 581 aa6.31□□□□□ -1.4
ZEB1-224ENST00000606161 ERVK-9P63128 1117 aa6.31□□□□□ -1.4
ZEB1-224ENST00000606161 GSK3AP49840 483 aa6.3□□□□□ -1.4
ZEB1-224ENST00000606161 NR1H3Q13133 447 aa6.3□□□□□ -1.4
ZEB1-224ENST00000606161 VWA5B2Q8N398 1253 aa6.3□□□□□ -1.4
ZEB1-224ENST00000606161 BANK1Q8NDB2 785 aa6.3□□□□□ -1.4
ZEB1-224ENST00000606161 CDC14CA4D256 554 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms