RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
NOLC1-208ENST00000603946 NINLQ9Y2I6 1382 aa10.86□□□□□ -0.67
NOLC1-208ENST00000603946 APAF1O14727 1248 aa10.86□□□□□ -0.67
NOLC1-208ENST00000603946 TOM1L2Q6ZVM7 507 aa10.86□□□□□ -0.67
NOLC1-208ENST00000603946 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
NOLC1-208ENST00000603946 ADGRB2O60241 1585 aa10.85□□□□□ -0.67
NOLC1-208ENST00000603946 DCTN1Q14203 1278 aa10.85□□□□□ -0.67
NOLC1-208ENST00000603946 ARHGEF25Q86VW2 580 aa10.85□□□□□ -0.67
NOLC1-208ENST00000603946 ANKRD24Q8TF21 1146 aa10.85□□□□□ -0.67
NOLC1-208ENST00000603946 EYA1Q99502 592 aa10.85□□□□□ -0.67
NOLC1-208ENST00000603946 CFAP53Q96M91 514 aa10.85□□□□□ -0.67
NOLC1-208ENST00000603946 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
NOLC1-208ENST00000603946 KAT6BQ8WYB5 2073 aa10.84□□□□□ -0.67
NOLC1-208ENST00000603946 PRKAR2BP31323 418 aa10.84□□□□□ -0.67
NOLC1-208ENST00000603946 DCCP43146 1447 aa10.84□□□□□ -0.67
NOLC1-208ENST00000603946 PXDNQ92626 1479 aa10.83□□□□□ -0.68
NOLC1-208ENST00000603946 TNS3Q68CZ2 1445 aa10.83□□□□□ -0.68
NOLC1-208ENST00000603946 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
NOLC1-208ENST00000603946 KCNH5Q8NCM2 988 aa10.83□□□□□ -0.68
NOLC1-208ENST00000603946 PODXL2Q9NZ53 605 aa10.83□□□□□ -0.68
NOLC1-208ENST00000603946 LAS1LQ9Y4W2 734 aaKnown RBP10.83□□□□□ -0.68
NOLC1-208ENST00000603946 IL13P35225 146 aa10.82□□□□□ -0.68
NOLC1-208ENST00000603946 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
NOLC1-208ENST00000603946 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 OVOS2A0A0J9YW53 1432 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 OVOS2Q6IE36 1432 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 PIK3C2AO00443 1686 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 IP6K1Q92551 441 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 CDCA7LQ96GN5 454 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 UTRNP46939 3433 aa10.81□□□□□ -0.68
NOLC1-208ENST00000603946 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
NOLC1-208ENST00000603946 MIS18AQ9NYP9 233 aa10.8□□□□□ -0.68
NOLC1-208ENST00000603946 PNPLA6Q8IY17 1366 aa10.8□□□□□ -0.68
NOLC1-208ENST00000603946 CCER2I3L3R5 266 aa10.8□□□□□ -0.68
NOLC1-208ENST00000603946 NUDCQ9Y266 331 aa10.8□□□□□ -0.68
NOLC1-208ENST00000603946 TOPAZ1Q8N9V7 1692 aa10.79□□□□□ -0.68
NOLC1-208ENST00000603946 TCP11L2Q8N4U5 519 aa10.79□□□□□ -0.68
NOLC1-208ENST00000603946 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
NOLC1-208ENST00000603946 MED1Q15648 1581 aaPredicted RBP10.79□□□□□ -0.68
NOLC1-208ENST00000603946 MCM10Q7L590 875 aa10.79□□□□□ -0.68
NOLC1-208ENST00000603946 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
NOLC1-208ENST00000603946 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
NOLC1-208ENST00000603946 ELL2O00472 640 aaPredicted RBP10.78□□□□□ -0.68
NOLC1-208ENST00000603946 USP21Q9UK80 565 aa10.78□□□□□ -0.68
NOLC1-208ENST00000603946 AKAP12Q02952 1782 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.69
NOLC1-208ENST00000603946 FLT4P35916 1363 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 USP19O94966 1318 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 ERBB3P21860 1342 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 MPRIPQ6WCQ1 1025 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 MON2Q7Z3U7 1717 aa10.77□□□□□ -0.69
NOLC1-208ENST00000603946 USP31Q70CQ4 1352 aa10.76□□□□□ -0.69
NOLC1-208ENST00000603946 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
NOLC1-208ENST00000603946 RIPK4P57078 832 aa10.76□□□□□ -0.69
NOLC1-208ENST00000603946 SYTL4Q96C24 671 aaPredicted RBP10.76□□□□□ -0.69
NOLC1-208ENST00000603946 MAPK8IP3Q9UPT6 1336 aa10.76□□□□□ -0.69
NOLC1-208ENST00000603946 MTHFSDQ2M296 383 aaKnown RBP10.76□□□□□ -0.69
NOLC1-208ENST00000603946 FBXO41Q8TF61 875 aa10.76□□□□□ -0.69
NOLC1-208ENST00000603946 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
NOLC1-208ENST00000603946 NSD2O96028 1365 aa10.76□□□□□ -0.69
NOLC1-208ENST00000603946 AFF2P51816 1311 aa10.75□□□□□ -0.69
NOLC1-208ENST00000603946 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
NOLC1-208ENST00000603946 HOMEZQ8IX15 550 aa10.75□□□□□ -0.69
NOLC1-208ENST00000603946 ZNF428Q96B54 188 aa10.75□□□□□ -0.69
NOLC1-208ENST00000603946 JCADQ9P266 1359 aa10.74□□□□□ -0.69
NOLC1-208ENST00000603946 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
NOLC1-208ENST00000603946 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
NOLC1-208ENST00000603946 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
NOLC1-208ENST00000603946 LGR6Q9HBX8 967 aa10.74□□□□□ -0.69
NOLC1-208ENST00000603946 TSR2Q969E8 191 aaKnown RBP10.74□□□□□ -0.69
NOLC1-208ENST00000603946 ACSBG1Q96GR2 724 aa10.74□□□□□ -0.69
NOLC1-208ENST00000603946 CAMTA1Q9Y6Y1 1673 aa10.73□□□□□ -0.69
NOLC1-208ENST00000603946 NEFMP07197 916 aa10.73□□□□□ -0.69
NOLC1-208ENST00000603946 KIF20BQ96Q89 1820 aa10.73□□□□□ -0.69
NOLC1-208ENST00000603946 PEAK1Q9H792 1746 aa10.73□□□□□ -0.69
NOLC1-208ENST00000603946 IRX6P78412 446 aaPredicted RBP10.73□□□□□ -0.69
NOLC1-208ENST00000603946 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
NOLC1-208ENST00000603946 NRKQ7Z2Y5 1582 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 KRT24Q2M2I5 525 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 TRPM3Q9HCF6 1732 aaPredicted RBP10.72□□□□□ -0.69
NOLC1-208ENST00000603946 LRP6O75581 1613 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 RGPD5Q99666 1765 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 TMPOP42166 694 aaKnown RBP10.72□□□□□ -0.69
NOLC1-208ENST00000603946 KCNQ4P56696 695 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 RUNDC1Q96C34 613 aa10.72□□□□□ -0.69
NOLC1-208ENST00000603946 ZNF530Q6P9A1 599 aaPredicted RBP10.71□□□□□ -0.69
NOLC1-208ENST00000603946 PLEKHF1Q96S99 279 aa10.71□□□□□ -0.69
NOLC1-208ENST00000603946 INSRP06213 1382 aa10.71□□□□□ -0.69
NOLC1-208ENST00000603946 PTF1AQ7RTS3 328 aa10.71□□□□□ -0.69
NOLC1-208ENST00000603946 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
NOLC1-208ENST00000603946 FCHSD2O94868 740 aa10.7□□□□□ -0.7
NOLC1-208ENST00000603946 SLC39A6Q13433 755 aa10.7□□□□□ -0.7
NOLC1-208ENST00000603946 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
NOLC1-208ENST00000603946 COL16A1Q07092 1604 aaPredicted RBP10.7□□□□□ -0.7
NOLC1-208ENST00000603946 UNC5CLQ8IV45 518 aa10.7□□□□□ -0.7
NOLC1-208ENST00000603946 WDR17Q8IZU2 1322 aa10.7□□□□□ -0.7
NOLC1-208ENST00000603946 NFAT5O94916 1531 aa10.69□□□□□ -0.7
NOLC1-208ENST00000603946 ALS2Q96Q42 1657 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms