RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 CRB1P82279 1406 aa24.44■■□□□ 1.5
IRF3-230ENST00000601809 BARGINQ6ZT62 677 aa24.43■■□□□ 1.5
IRF3-230ENST00000601809 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
IRF3-230ENST00000601809 CARD14Q9BXL6 1004 aa24.42■■□□□ 1.5
IRF3-230ENST00000601809 WNK3Q9BYP7 1800 aa24.42■■□□□ 1.5
IRF3-230ENST00000601809 SOX12O15370 315 aa24.41■■□□□ 1.5
IRF3-230ENST00000601809 EVA1CP58658 441 aa24.41■■□□□ 1.5
IRF3-230ENST00000601809 PARP4Q9UKK3 1724 aaKnown RBP24.41■■□□□ 1.5
IRF3-230ENST00000601809 FYB1O15117 783 aa24.4■■□□□ 1.5
IRF3-230ENST00000601809 KRT27Q7Z3Y8 459 aa24.4■■□□□ 1.5
IRF3-230ENST00000601809 WDR17Q8IZU2 1322 aa24.39■■□□□ 1.5
IRF3-230ENST00000601809 ZBTB7CA1YPR0 619 aa24.38■■□□□ 1.49
IRF3-230ENST00000601809 C11orf95C9JLR9 678 aaPredicted RBP24.38■■□□□ 1.49
IRF3-230ENST00000601809 TCP11L2Q8N4U5 519 aa24.38■■□□□ 1.49
IRF3-230ENST00000601809 THRAP3Q9Y2W1 955 aaKnown RBP24.38■■□□□ 1.49
IRF3-230ENST00000601809 NSD3Q9BZ95 1437 aa24.35■■□□□ 1.49
IRF3-230ENST00000601809 USP35Q9P2H5 1018 aa24.35■■□□□ 1.49
IRF3-230ENST00000601809 LRRC37A3O60309 1634 aa24.35■■□□□ 1.49
IRF3-230ENST00000601809 COG3Q96JB2 828 aa24.34■■□□□ 1.49
IRF3-230ENST00000601809 DISP2A7MBM2 1401 aa24.34■■□□□ 1.49
IRF3-230ENST00000601809 BLMP54132 1417 aaPredicted RBP24.34■■□□□ 1.49
IRF3-230ENST00000601809 ERBB3P21860 1342 aa24.33■■□□□ 1.48
IRF3-230ENST00000601809 CCDC125Q86Z20 511 aa24.32■■□□□ 1.48
IRF3-230ENST00000601809 GGNBP2Q9H3C7 697 aa24.32■■□□□ 1.48
IRF3-230ENST00000601809 A0A0G2JS52 829 aa24.31■■□□□ 1.48
IRF3-230ENST00000601809 FBLN1P23142 703 aa24.31■■□□□ 1.48
IRF3-230ENST00000601809 MYT1Q01538 1121 aa24.31■■□□□ 1.48
IRF3-230ENST00000601809 CARD10Q9BWT7 1032 aa24.31■■□□□ 1.48
IRF3-230ENST00000601809 MAP3K19Q56UN5 1328 aa24.31■■□□□ 1.48
IRF3-230ENST00000601809 PEAK1Q9H792 1746 aa24.3■■□□□ 1.48
IRF3-230ENST00000601809 TOM1L2Q6ZVM7 507 aa24.3■■□□□ 1.48
IRF3-230ENST00000601809 TNS1Q9HBL0 1735 aaKnown RBP24.3■■□□□ 1.48
IRF3-230ENST00000601809 FAM182BQ5T319 152 aa24.29■■□□□ 1.48
IRF3-230ENST00000601809 IP6K1Q92551 441 aa24.29■■□□□ 1.48
IRF3-230ENST00000601809 FAM208AQ9UK61 1670 aaKnown RBP24.28■■□□□ 1.48
IRF3-230ENST00000601809 ANKRD26Q9UPS8 1709 aa24.28■■□□□ 1.48
IRF3-230ENST00000601809 RGPD1P0DJD0 1748 aa24.27■■□□□ 1.48
IRF3-230ENST00000601809 RTL1A6NKG5 1358 aa24.26■■□□□ 1.47
IRF3-230ENST00000601809 CCDC7Q96M83 1385 aa24.26■■□□□ 1.47
IRF3-230ENST00000601809 ANKRD24Q8TF21 1146 aa24.25■■□□□ 1.47
IRF3-230ENST00000601809 HOXC9P31274 260 aa24.24■■□□□ 1.47
IRF3-230ENST00000601809 KIF7Q2M1P5 1343 aa24.24■■□□□ 1.47
IRF3-230ENST00000601809 RGPD2P0DJD1 1756 aa24.23■■□□□ 1.47
IRF3-230ENST00000601809 CSB-PGBD3P0DP91 1061 aa24.22■■□□□ 1.47
IRF3-230ENST00000601809 RRS1Q15050 365 aaKnown RBP24.22■■□□□ 1.47
IRF3-230ENST00000601809 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
IRF3-230ENST00000601809 CGNL1Q0VF96 1302 aa24.21■■□□□ 1.47
IRF3-230ENST00000601809 PANK3Q9H999 370 aa24.21■■□□□ 1.47
IRF3-230ENST00000601809 KIF24Q5T7B8 1368 aa24.2■■□□□ 1.46
IRF3-230ENST00000601809 SBF2Q86WG5 1849 aa24.2■■□□□ 1.46
IRF3-230ENST00000601809 CDCA7Q9BWT1 371 aaPredicted RBP24.2■■□□□ 1.46
IRF3-230ENST00000601809 PDE3BQ13370 1112 aa24.19■■□□□ 1.46
IRF3-230ENST00000601809 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
IRF3-230ENST00000601809 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
IRF3-230ENST00000601809 BCL9O00512 1426 aa24.18■■□□□ 1.46
IRF3-230ENST00000601809 TNS2Q63HR2 1409 aa24.18■■□□□ 1.46
IRF3-230ENST00000601809 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
IRF3-230ENST00000601809 DDB1Q16531 1140 aa24.17■■□□□ 1.46
IRF3-230ENST00000601809 AMPHP49418 695 aa24.16■■□□□ 1.46
IRF3-230ENST00000601809 NLRP2Q9NX02 1062 aa24.16■■□□□ 1.46
IRF3-230ENST00000601809 OVOS2A0A0G2JMS6 1433 aa24.16■■□□□ 1.46
IRF3-230ENST00000601809 INSRP06213 1382 aa24.16■■□□□ 1.46
IRF3-230ENST00000601809 MARCH10Q8NA82 808 aaPredicted RBP24.15■■□□□ 1.46
IRF3-230ENST00000601809 FLT4P35916 1363 aa24.15■■□□□ 1.46
IRF3-230ENST00000601809 EMILIN1Q9Y6C2 1016 aa24.14■■□□□ 1.45
IRF3-230ENST00000601809 NSD2O96028 1365 aa24.13■■□□□ 1.45
IRF3-230ENST00000601809 TRIM37O94972 964 aa24.12■■□□□ 1.45
IRF3-230ENST00000601809 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
IRF3-230ENST00000601809 SHANK3Q9BYB0 1731 aa24.12■■□□□ 1.45
IRF3-230ENST00000601809 WASHC2AQ641Q2 1341 aa24.11■■□□□ 1.45
IRF3-230ENST00000601809 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
IRF3-230ENST00000601809 IL2RBP14784 551 aa24.11■■□□□ 1.45
IRF3-230ENST00000601809 SF3B2Q13435 895 aaKnown RBP24.11■■□□□ 1.45
IRF3-230ENST00000601809 LTV1Q96GA3 475 aaPredicted RBP24.11■■□□□ 1.45
IRF3-230ENST00000601809 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
IRF3-230ENST00000601809 POLKQ9UBT6 870 aa24.1■■□□□ 1.45
IRF3-230ENST00000601809 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
IRF3-230ENST00000601809 RREB1Q92766 1687 aa24.09■■□□□ 1.45
IRF3-230ENST00000601809 EXOC5O00471 708 aa24.09■■□□□ 1.45
IRF3-230ENST00000601809 AMER1Q5JTC6 1135 aaPredicted RBP24.09■■□□□ 1.45
IRF3-230ENST00000601809 NBPF6Q5VWK0 638 aa24.09■■□□□ 1.45
IRF3-230ENST00000601809 NBPF4Q96M43 638 aa24.09■■□□□ 1.45
IRF3-230ENST00000601809 MEGF6O75095 1541 aa24.09■■□□□ 1.45
IRF3-230ENST00000601809 BAG6P46379 1132 aa24.08■■□□□ 1.45
IRF3-230ENST00000601809 RGPD3A6NKT7 1758 aaPredicted RBP24.07■■□□□ 1.44
IRF3-230ENST00000601809 RGPD4Q7Z3J3 1758 aa24.07■■□□□ 1.44
IRF3-230ENST00000601809 CAMKK2Q96RR4 588 aa24.07■■□□□ 1.44
IRF3-230ENST00000601809 EN1Q05925 392 aaPredicted RBP24.06■■□□□ 1.44
IRF3-230ENST00000601809 PTF1AQ7RTS3 328 aa24.05■■□□□ 1.44
IRF3-230ENST00000601809 NHSQ6T4R5 1651 aa24.05■■□□□ 1.44
IRF3-230ENST00000601809 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
IRF3-230ENST00000601809 NUP188Q5SRE5 1749 aa24.02■■□□□ 1.44
IRF3-230ENST00000601809 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
IRF3-230ENST00000601809 PARD3Q8TEW0 1356 aa24.02■■□□□ 1.44
IRF3-230ENST00000601809 APBA3O96018 575 aa24.01■■□□□ 1.43
IRF3-230ENST00000601809 USHBP1Q8N6Y0 703 aa24.01■■□□□ 1.43
IRF3-230ENST00000601809 BCL11BQ9C0K0 894 aaPredicted RBP24■■□□□ 1.43
IRF3-230ENST00000601809 PKD1L3Q7Z443 1732 aa23.99■■□□□ 1.43
IRF3-230ENST00000601809 TNNT2P45379 298 aaPredicted RBP23.99■■□□□ 1.43
IRF3-230ENST00000601809 NPC1L1Q9UHC9 1359 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms