RNA–Protein interactions for RNA: ENST00000601333.1

ECH1-215, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-215ENST00000601333 PEAK1Q9H792 1746 aa20.33■□□□□ 0.85
ECH1-215ENST00000601333 MAP3K19Q56UN5 1328 aa20.33■□□□□ 0.85
ECH1-215ENST00000601333 PER1O15534 1290 aaPredicted RBP20.33■□□□□ 0.85
ECH1-215ENST00000601333 CNGB1Q14028 1251 aaPredicted RBP20.33■□□□□ 0.85
ECH1-215ENST00000601333 VPS72Q15906 364 aa20.33■□□□□ 0.85
ECH1-215ENST00000601333 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
ECH1-215ENST00000601333 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
ECH1-215ENST00000601333 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
ECH1-215ENST00000601333 RBM6P78332 1123 aaKnown RBP20.32■□□□□ 0.84
ECH1-215ENST00000601333 CCDC9Q9Y3X0 531 aaKnown RBP20.32■□□□□ 0.84
ECH1-215ENST00000601333 ANKRD26Q9UPS8 1709 aa20.32■□□□□ 0.84
ECH1-215ENST00000601333 AMER1Q5JTC6 1135 aaPredicted RBP20.31■□□□□ 0.84
ECH1-215ENST00000601333 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
ECH1-215ENST00000601333 SPATA31A5Q5VU36 1347 aa20.29■□□□□ 0.84
ECH1-215ENST00000601333 SPATA31A7Q8IWB4 1347 aa20.29■□□□□ 0.84
ECH1-215ENST00000601333 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
ECH1-215ENST00000601333 EVA1CP58658 441 aa20.28■□□□□ 0.84
ECH1-215ENST00000601333 FAM98CQ17RN3 349 aaKnown RBP20.27■□□□□ 0.84
ECH1-215ENST00000601333 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.84
ECH1-215ENST00000601333 KNSTRNQ9Y448 316 aa20.27■□□□□ 0.84
ECH1-215ENST00000601333 BRWD3Q6RI45 1802 aa20.27■□□□□ 0.84
ECH1-215ENST00000601333 SPATA31A1Q5TZJ5 1347 aa20.27■□□□□ 0.83
ECH1-215ENST00000601333 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
ECH1-215ENST00000601333 LTV1Q96GA3 475 aaPredicted RBP20.26■□□□□ 0.83
ECH1-215ENST00000601333 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
ECH1-215ENST00000601333 HOXC9P31274 260 aa20.25■□□□□ 0.83
ECH1-215ENST00000601333 IP6K1Q92551 441 aa20.24■□□□□ 0.83
ECH1-215ENST00000601333 AMPHP49418 695 aa20.23■□□□□ 0.83
ECH1-215ENST00000601333 HSP90AB2PQ58FF8 381 aa20.23■□□□□ 0.83
ECH1-215ENST00000601333 ANKRD24Q8TF21 1146 aa20.23■□□□□ 0.83
ECH1-215ENST00000601333 CDK12Q9NYV4 1490 aaPredicted RBP20.23■□□□□ 0.83
ECH1-215ENST00000601333 SEPT12Q8IYM1 358 aa20.22■□□□□ 0.83
ECH1-215ENST00000601333 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
ECH1-215ENST00000601333 ERBB3P21860 1342 aa20.22■□□□□ 0.83
ECH1-215ENST00000601333 WDR17Q8IZU2 1322 aa20.22■□□□□ 0.83
ECH1-215ENST00000601333 CRB1P82279 1406 aa20.21■□□□□ 0.83
ECH1-215ENST00000601333 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
ECH1-215ENST00000601333 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
ECH1-215ENST00000601333 DDX10Q13206 875 aaKnown RBP20.21■□□□□ 0.83
ECH1-215ENST00000601333 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
ECH1-215ENST00000601333 MORC1Q86VD1 984 aa20.21■□□□□ 0.83
ECH1-215ENST00000601333 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
ECH1-215ENST00000601333 ABCC6O95255 1503 aa20.21■□□□□ 0.83
ECH1-215ENST00000601333 ONECUT3O60422 494 aaPredicted RBP20.19■□□□□ 0.82
ECH1-215ENST00000601333 FAM182BQ5T319 152 aa20.19■□□□□ 0.82
ECH1-215ENST00000601333 NSD2O96028 1365 aa20.19■□□□□ 0.82
ECH1-215ENST00000601333 A0A0G2JS52 829 aa20.18■□□□□ 0.82
ECH1-215ENST00000601333 MYT1Q01538 1121 aa20.18■□□□□ 0.82
ECH1-215ENST00000601333 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
ECH1-215ENST00000601333 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
ECH1-215ENST00000601333 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
ECH1-215ENST00000601333 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
ECH1-215ENST00000601333 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
ECH1-215ENST00000601333 RTL1A6NKG5 1358 aa20.16■□□□□ 0.82
ECH1-215ENST00000601333 FAM208AQ9UK61 1670 aaKnown RBP20.16■□□□□ 0.82
ECH1-215ENST00000601333 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
ECH1-215ENST00000601333 FLT4P35916 1363 aa20.15■□□□□ 0.82
ECH1-215ENST00000601333 INSRP06213 1382 aa20.14■□□□□ 0.81
ECH1-215ENST00000601333 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.81
ECH1-215ENST00000601333 NBPF4Q96M43 638 aa20.14■□□□□ 0.81
ECH1-215ENST00000601333 EP400Q96L91 3159 aa20.14■□□□□ 0.81
ECH1-215ENST00000601333 DISP2A7MBM2 1401 aa20.13■□□□□ 0.81
ECH1-215ENST00000601333 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
ECH1-215ENST00000601333 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
ECH1-215ENST00000601333 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
ECH1-215ENST00000601333 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
ECH1-215ENST00000601333 SOCS7O14512 581 aa20.12■□□□□ 0.81
ECH1-215ENST00000601333 PARP4Q9UKK3 1724 aaKnown RBP20.1■□□□□ 0.81
ECH1-215ENST00000601333 EIF4A2Q14240 407 aaKnown RBP20.1■□□□□ 0.81
ECH1-215ENST00000601333 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
ECH1-215ENST00000601333 MTHFSP49914 203 aa20.09■□□□□ 0.81
ECH1-215ENST00000601333 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
ECH1-215ENST00000601333 MEGF6O75095 1541 aa20.08■□□□□ 0.81
ECH1-215ENST00000601333 THRAP3Q9Y2W1 955 aaKnown RBP20.08■□□□□ 0.81
ECH1-215ENST00000601333 KIF24Q5T7B8 1368 aa20.08■□□□□ 0.8
ECH1-215ENST00000601333 EYA1Q99502 592 aa20.07■□□□□ 0.8
ECH1-215ENST00000601333 UPF1Q92900 1129 aaKnown RBP eCLIP20.05■□□□□ 0.8
ECH1-215ENST00000601333 SHANK3Q9BYB0 1731 aa20.04■□□□□ 0.8
ECH1-215ENST00000601333 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
ECH1-215ENST00000601333 IL2RBP14784 551 aa20.03■□□□□ 0.8
ECH1-215ENST00000601333 PPP2R1AP30153 589 aa20.03■□□□□ 0.8
ECH1-215ENST00000601333 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
ECH1-215ENST00000601333 DDB1Q16531 1140 aa20.02■□□□□ 0.8
ECH1-215ENST00000601333 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
ECH1-215ENST00000601333 PARD3Q8TEW0 1356 aa20.02■□□□□ 0.8
ECH1-215ENST00000601333 RGPD1P0DJD0 1748 aa20.02■□□□□ 0.79
ECH1-215ENST00000601333 NCAPD2Q15021 1401 aa20.02■□□□□ 0.79
ECH1-215ENST00000601333 IL13P35225 146 aa20.01■□□□□ 0.79
ECH1-215ENST00000601333 PTF1AQ7RTS3 328 aa20.01■□□□□ 0.79
ECH1-215ENST00000601333 TNS2Q63HR2 1409 aa20.01■□□□□ 0.79
ECH1-215ENST00000601333 PDE3BQ13370 1112 aa20■□□□□ 0.79
ECH1-215ENST00000601333 OVOS2A0A0G2JMS6 1433 aa19.98■□□□□ 0.79
ECH1-215ENST00000601333 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
ECH1-215ENST00000601333 EXOC5O00471 708 aa19.97■□□□□ 0.79
ECH1-215ENST00000601333 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
ECH1-215ENST00000601333 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
ECH1-215ENST00000601333 TRIM37O94972 964 aa19.95■□□□□ 0.78
ECH1-215ENST00000601333 CDCA7Q9BWT1 371 aaPredicted RBP19.95■□□□□ 0.78
ECH1-215ENST00000601333 TNS1Q9HBL0 1735 aaKnown RBP19.94■□□□□ 0.78
ECH1-215ENST00000601333 HMOX1P09601 288 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms