RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 ADAMTS8Q9UP79 889 aa29.46■■■□□ 2.31
SNRNP70-209ENST00000601065 IL13P35225 146 aa29.45■■■□□ 2.31
SNRNP70-209ENST00000601065 NUDCQ9Y266 331 aa29.45■■■□□ 2.31
SNRNP70-209ENST00000601065 KIAA0232Q92628 1395 aa29.44■■■□□ 2.3
SNRNP70-209ENST00000601065 EIF4A2Q14240 407 aaKnown RBP29.43■■■□□ 2.3
SNRNP70-209ENST00000601065 COL18A1P39060 1754 aa29.41■■■□□ 2.3
SNRNP70-209ENST00000601065 ABCC6O95255 1503 aa29.41■■■□□ 2.3
SNRNP70-209ENST00000601065 U2SURPO15042 1029 aaKnown RBP29.4■■■□□ 2.3
SNRNP70-209ENST00000601065 HSPA1LP34931 641 aa29.4■■■□□ 2.3
SNRNP70-209ENST00000601065 BLMP54132 1417 aaPredicted RBP29.4■■■□□ 2.3
SNRNP70-209ENST00000601065 JCADQ9P266 1359 aa29.39■■■□□ 2.3
SNRNP70-209ENST00000601065 U2AF1L5P0DN76 240 aaPredicted RBP29.39■■■□□ 2.29
SNRNP70-209ENST00000601065 U2AF1Q01081 240 aaKnown RBP eCLIP29.39■■■□□ 2.29
SNRNP70-209ENST00000601065 AXIN2Q9Y2T1 843 aa29.39■■■□□ 2.29
SNRNP70-209ENST00000601065 CHRNA2Q15822 529 aa29.37■■■□□ 2.29
SNRNP70-209ENST00000601065 PRDM11Q9NQV5 511 aa29.37■■■□□ 2.29
SNRNP70-209ENST00000601065 RGPD5Q99666 1765 aa29.37■■■□□ 2.29
SNRNP70-209ENST00000601065 RGPD1P0DJD0 1748 aa29.36■■■□□ 2.29
SNRNP70-209ENST00000601065 LMO7Q8WWI1 1683 aa29.34■■■□□ 2.29
SNRNP70-209ENST00000601065 LTV1Q96GA3 475 aaPredicted RBP29.34■■■□□ 2.29
SNRNP70-209ENST00000601065 HNRNPUQ00839 825 aaKnown RBP eCLIP29.32■■■□□ 2.284e-9■■□□□ 13
SNRNP70-209ENST00000601065 ERBB3P21860 1342 aa29.31■■■□□ 2.28
SNRNP70-209ENST00000601065 ANKRD24Q8TF21 1146 aa29.31■■■□□ 2.28
SNRNP70-209ENST00000601065 FAM83GA6ND36 823 aa29.3■■■□□ 2.28
SNRNP70-209ENST00000601065 EYA1Q99502 592 aa29.3■■■□□ 2.28
SNRNP70-209ENST00000601065 CAMTA1Q9Y6Y1 1673 aa29.29■■■□□ 2.28
SNRNP70-209ENST00000601065 IGSF1Q8N6C5 1336 aa29.29■■■□□ 2.28
SNRNP70-209ENST00000601065 FCHSD2O94868 740 aa29.29■■■□□ 2.28
SNRNP70-209ENST00000601065 CCDC146Q8IYE0 955 aa29.29■■■□□ 2.28
SNRNP70-209ENST00000601065 NUTM2BA6NNL0 878 aaPredicted RBP29.28■■■□□ 2.28
SNRNP70-209ENST00000601065 NUTM2EB1AL46 878 aaPredicted RBP29.28■■■□□ 2.28
SNRNP70-209ENST00000601065 CENPBP07199 599 aaPredicted RBP29.28■■■□□ 2.28
SNRNP70-209ENST00000601065 HMOX1P09601 288 aa29.28■■■□□ 2.28
SNRNP70-209ENST00000601065 NUTM2AQ8IVF1 878 aaPredicted RBP29.28■■■□□ 2.28
SNRNP70-209ENST00000601065 COL14A1Q05707 1796 aaKnown RBP29.28■■■□□ 2.28
SNRNP70-209ENST00000601065 SPATA31A6Q5VVP1 1343 aa29.27■■■□□ 2.28
SNRNP70-209ENST00000601065 RSPH6AQ9H0K4 717 aa29.27■■■□□ 2.28
SNRNP70-209ENST00000601065 RGPD2P0DJD1 1756 aa29.26■■■□□ 2.27
SNRNP70-209ENST00000601065 ADAMTS2O95450 1211 aa29.26■■■□□ 2.27
SNRNP70-209ENST00000601065 SULT6B1Q6IMI4 303 aa29.26■■■□□ 2.27
SNRNP70-209ENST00000601065 PLEKHF1Q96S99 279 aa29.25■■■□□ 2.27
SNRNP70-209ENST00000601065 NBPF6Q5VWK0 638 aa29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 AEBP1Q8IUX7 1158 aa29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 RUNDC1Q96C34 613 aa29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 NBPF4Q96M43 638 aa29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 KDRP35968 1356 aa29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 COL5A2P05997 1499 aaPredicted RBP29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 PNNQ9H307 717 aaKnown RBP29.24■■■□□ 2.27
SNRNP70-209ENST00000601065 FAM208AQ9UK61 1670 aaKnown RBP29.23■■■□□ 2.27
SNRNP70-209ENST00000601065 PRKAR2BP31323 418 aa29.22■■■□□ 2.27
SNRNP70-209ENST00000601065 SENP3-EIF4A1A0A087X0R7 540 aa29.2■■■□□ 2.26
SNRNP70-209ENST00000601065 BTG4Q9NY30 223 aa29.2■■■□□ 2.26
SNRNP70-209ENST00000601065 NCAPD2Q15021 1401 aa29.2■■■□□ 2.26
SNRNP70-209ENST00000601065 CSB-PGBD3P0DP91 1061 aa29.19■■■□□ 2.26
SNRNP70-209ENST00000601065 LRP6O75581 1613 aa29.19■■■□□ 2.26
SNRNP70-209ENST00000601065 PLCH1Q4KWH8 1693 aa29.19■■■□□ 2.26
SNRNP70-209ENST00000601065 APAF1O14727 1248 aa29.18■■■□□ 2.26
SNRNP70-209ENST00000601065 USHBP1Q8N6Y0 703 aa29.18■■■□□ 2.26
SNRNP70-209ENST00000601065 WDR17Q8IZU2 1322 aa29.18■■■□□ 2.26
SNRNP70-209ENST00000601065 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
SNRNP70-209ENST00000601065 MAPK8IP3Q9UPT6 1336 aa29.17■■■□□ 2.26
SNRNP70-209ENST00000601065 NLRP2Q9NX02 1062 aa29.16■■■□□ 2.26
SNRNP70-209ENST00000601065 TCP11L2Q8N4U5 519 aa29.16■■■□□ 2.26
SNRNP70-209ENST00000601065 EVA1CP58658 441 aa29.14■■■□□ 2.26
SNRNP70-209ENST00000601065 PHACTR3Q96KR7 559 aa29.14■■■□□ 2.26
SNRNP70-209ENST00000601065 STRN4Q9NRL3 753 aa29.14■■■□□ 2.26
SNRNP70-209ENST00000601065 NEFMP07197 916 aa29.13■■■□□ 2.25
SNRNP70-209ENST00000601065 ZBED9Q6R2W3 1325 aa29.13■■■□□ 2.25
SNRNP70-209ENST00000601065 SLIT2O94813 1529 aa29.13■■■□□ 2.25
SNRNP70-209ENST00000601065 NWD2Q9ULI1 1742 aa29.12■■■□□ 2.25
SNRNP70-209ENST00000601065 NRAPQ86VF7 1730 aa29.12■■■□□ 2.25
SNRNP70-209ENST00000601065 LARP1Q6PKG0 1096 aaKnown RBP29.11■■■□□ 2.25
SNRNP70-209ENST00000601065 TOM1L2Q6ZVM7 507 aa29.11■■■□□ 2.25
SNRNP70-209ENST00000601065 SALL2Q9Y467 1007 aaPredicted RBP29.11■■■□□ 2.25
SNRNP70-209ENST00000601065 C8orf37Q96NL8 207 aa29.1■■■□□ 2.25
SNRNP70-209ENST00000601065 TMPOP42166 694 aaKnown RBP29.08■■■□□ 2.25
SNRNP70-209ENST00000601065 RRP7AQ9Y3A4 280 aaKnown RBP29.08■■■□□ 2.25
SNRNP70-209ENST00000601065 CRB1P82279 1406 aa29.08■■■□□ 2.25
SNRNP70-209ENST00000601065 CARD10Q9BWT7 1032 aa29.08■■■□□ 2.25
SNRNP70-209ENST00000601065 NEUROD2Q15784 382 aa29.07■■■□□ 2.24
SNRNP70-209ENST00000601065 NGEFQ8N5V2 710 aa29.07■■■□□ 2.24
SNRNP70-209ENST00000601065 NGLY1Q96IV0 654 aa29.06■■■□□ 2.24
SNRNP70-209ENST00000601065 NFE2L2Q16236 605 aa29.05■■■□□ 2.24
SNRNP70-209ENST00000601065 NCBP3Q53F19 620 aaKnown RBP29.05■■■□□ 2.24
SNRNP70-209ENST00000601065 MEX3CQ5U5Q3 659 aaKnown RBP29.04■■■□□ 2.24
SNRNP70-209ENST00000601065 FNBP4Q8N3X1 1017 aaPredicted RBP29.04■■■□□ 2.24
SNRNP70-209ENST00000601065 BCL9LQ86UU0 1499 aa29.02■■■□□ 2.24
SNRNP70-209ENST00000601065 RIPK4P57078 832 aa29.02■■■□□ 2.24
SNRNP70-209ENST00000601065 MTHFSDQ2M296 383 aaKnown RBP29.02■■■□□ 2.24
SNRNP70-209ENST00000601065 RAPGEF4Q8WZA2 1011 aa29.02■■■□□ 2.24
SNRNP70-209ENST00000601065 MEGF6O75095 1541 aa29.01■■■□□ 2.24
SNRNP70-209ENST00000601065 CCDC27Q2M243 656 aa29.01■■■□□ 2.23
SNRNP70-209ENST00000601065 PHF23Q9BUL5 403 aaPredicted RBP29.01■■■□□ 2.23
SNRNP70-209ENST00000601065 DLG5Q8TDM6 1919 aa29.01■■■□□ 2.23
SNRNP70-209ENST00000601065 ZNF521Q96K83 1311 aa29.01■■■□□ 2.23
SNRNP70-209ENST00000601065 UNC5CLQ8IV45 518 aa29.01■■■□□ 2.23
SNRNP70-209ENST00000601065 PLEKHG2Q9H7P9 1386 aa28.99■■■□□ 2.23
SNRNP70-209ENST00000601065 GAS2L2Q8NHY3 880 aa28.99■■■□□ 2.23
SNRNP70-209ENST00000601065 USP35Q9P2H5 1018 aa28.99■■■□□ 2.23
SNRNP70-209ENST00000601065 WWC1Q8IX03 1113 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms