RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
ARHGEF1-216ENST00000598587 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
ARHGEF1-216ENST00000598587 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF1-216ENST00000598587 FYB1O15117 783 aa16.58■□□□□ 0.24
ARHGEF1-216ENST00000598587 NSD2O96028 1365 aa16.58■□□□□ 0.24
ARHGEF1-216ENST00000598587 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
ARHGEF1-216ENST00000598587 THSD7AQ9UPZ6 1657 aa16.57■□□□□ 0.24
ARHGEF1-216ENST00000598587 CRB1P82279 1406 aa16.57■□□□□ 0.24
ARHGEF1-216ENST00000598587 SOCS7O14512 581 aa16.57■□□□□ 0.24
ARHGEF1-216ENST00000598587 CARD14Q9BXL6 1004 aa16.57■□□□□ 0.24
ARHGEF1-216ENST00000598587 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF1-216ENST00000598587 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
ARHGEF1-216ENST00000598587 SPATA31A5Q5VU36 1347 aa16.56■□□□□ 0.24
ARHGEF1-216ENST00000598587 SPATA31A7Q8IWB4 1347 aa16.56■□□□□ 0.24
ARHGEF1-216ENST00000598587 GGNBP2Q9H3C7 697 aa16.56■□□□□ 0.24
ARHGEF1-216ENST00000598587 PANK3Q9H999 370 aa16.56■□□□□ 0.24
ARHGEF1-216ENST00000598587 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
ARHGEF1-216ENST00000598587 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-216ENST00000598587 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
ARHGEF1-216ENST00000598587 A0A0G2JS52 829 aa16.54■□□□□ 0.24
ARHGEF1-216ENST00000598587 MYT1Q01538 1121 aa16.54■□□□□ 0.24
ARHGEF1-216ENST00000598587 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
ARHGEF1-216ENST00000598587 WDR17Q8IZU2 1322 aa16.53■□□□□ 0.24
ARHGEF1-216ENST00000598587 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
ARHGEF1-216ENST00000598587 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
ARHGEF1-216ENST00000598587 THRAP3Q9Y2W1 955 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-216ENST00000598587 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
ARHGEF1-216ENST00000598587 AMPHP49418 695 aa16.51■□□□□ 0.23
ARHGEF1-216ENST00000598587 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-216ENST00000598587 LARP1Q6PKG0 1096 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-216ENST00000598587 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
ARHGEF1-216ENST00000598587 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
ARHGEF1-216ENST00000598587 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
ARHGEF1-216ENST00000598587 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
ARHGEF1-216ENST00000598587 AXIN2Q9Y2T1 843 aa16.5■□□□□ 0.23
ARHGEF1-216ENST00000598587 ERBB3P21860 1342 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 MAP3K19Q56UN5 1328 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 LRRC37A3O60309 1634 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 BARGINQ6ZT62 677 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 IP6K1Q92551 441 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 FLT4P35916 1363 aa16.49■□□□□ 0.23
ARHGEF1-216ENST00000598587 HOXC9P31274 260 aa16.47■□□□□ 0.23
ARHGEF1-216ENST00000598587 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-216ENST00000598587 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
ARHGEF1-216ENST00000598587 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF1-216ENST00000598587 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
ARHGEF1-216ENST00000598587 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
ARHGEF1-216ENST00000598587 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
ARHGEF1-216ENST00000598587 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
ARHGEF1-216ENST00000598587 INSRP06213 1382 aa16.44■□□□□ 0.22
ARHGEF1-216ENST00000598587 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
ARHGEF1-216ENST00000598587 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
ARHGEF1-216ENST00000598587 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF1-216ENST00000598587 FBLN1P23142 703 aa16.42■□□□□ 0.22
ARHGEF1-216ENST00000598587 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF1-216ENST00000598587 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF1-216ENST00000598587 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF1-216ENST00000598587 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
ARHGEF1-216ENST00000598587 LTV1Q96GA3 475 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF1-216ENST00000598587 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
ARHGEF1-216ENST00000598587 EP400Q96L91 3159 aa16.41■□□□□ 0.22
ARHGEF1-216ENST00000598587 DISP2A7MBM2 1401 aa16.4■□□□□ 0.22
ARHGEF1-216ENST00000598587 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
ARHGEF1-216ENST00000598587 DDB1Q16531 1140 aa16.39■□□□□ 0.21
ARHGEF1-216ENST00000598587 SBF2Q86WG5 1849 aa16.39■□□□□ 0.21
ARHGEF1-216ENST00000598587 IL2RBP14784 551 aa16.38■□□□□ 0.21
ARHGEF1-216ENST00000598587 UPF1Q92900 1129 aaKnown RBP eCLIP16.38■□□□□ 0.21
ARHGEF1-216ENST00000598587 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
ARHGEF1-216ENST00000598587 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
ARHGEF1-216ENST00000598587 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
ARHGEF1-216ENST00000598587 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
ARHGEF1-216ENST00000598587 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-216ENST00000598587 CCDC125Q86Z20 511 aa16.37■□□□□ 0.21
ARHGEF1-216ENST00000598587 SF3B2Q13435 895 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-216ENST00000598587 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
ARHGEF1-216ENST00000598587 FAM196AQ6ZSG2 479 aa16.35■□□□□ 0.21
ARHGEF1-216ENST00000598587 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
ARHGEF1-216ENST00000598587 EXOC5O00471 708 aa16.34■□□□□ 0.21
ARHGEF1-216ENST00000598587 RAPGEF4Q8WZA2 1011 aa16.33■□□□□ 0.2
ARHGEF1-216ENST00000598587 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
ARHGEF1-216ENST00000598587 RGPD3A6NKT7 1758 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 RGPD4Q7Z3J3 1758 aa16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 NHSQ6T4R5 1651 aa16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 MEGF6O75095 1541 aa16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
ARHGEF1-216ENST00000598587 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
ARHGEF1-216ENST00000598587 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF1-216ENST00000598587 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
ARHGEF1-216ENST00000598587 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
ARHGEF1-216ENST00000598587 DOT1LQ8TEK3 1739 aa16.3■□□□□ 0.2
ARHGEF1-216ENST00000598587 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
ARHGEF1-216ENST00000598587 BCL9O00512 1426 aa16.29■□□□□ 0.2
ARHGEF1-216ENST00000598587 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
ARHGEF1-216ENST00000598587 MTHFSP49914 203 aa16.28■□□□□ 0.2
ARHGEF1-216ENST00000598587 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms