RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 CRB1P82279 1406 aa18.91■□□□□ 0.62
TMEM38A-202ENST00000595452 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
TMEM38A-202ENST00000595452 ARHGEF25Q86VW2 580 aa18.9■□□□□ 0.62
TMEM38A-202ENST00000595452 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
TMEM38A-202ENST00000595452 RGPD5Q99666 1765 aa18.9■□□□□ 0.62
TMEM38A-202ENST00000595452 THSD7AQ9UPZ6 1657 aa18.89■□□□□ 0.61
TMEM38A-202ENST00000595452 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.61
TMEM38A-202ENST00000595452 KRT27Q7Z3Y8 459 aa18.88■□□□□ 0.61
TMEM38A-202ENST00000595452 USP35Q9P2H5 1018 aa18.88■□□□□ 0.61
TMEM38A-202ENST00000595452 CSB-PGBD3P0DP91 1061 aa18.87■□□□□ 0.61
TMEM38A-202ENST00000595452 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
TMEM38A-202ENST00000595452 TOM1L2Q6ZVM7 507 aa18.87■□□□□ 0.61
TMEM38A-202ENST00000595452 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
TMEM38A-202ENST00000595452 NSD3Q9BZ95 1437 aa18.86■□□□□ 0.61
TMEM38A-202ENST00000595452 WDR17Q8IZU2 1322 aa18.86■□□□□ 0.61
TMEM38A-202ENST00000595452 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
TMEM38A-202ENST00000595452 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
TMEM38A-202ENST00000595452 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
TMEM38A-202ENST00000595452 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
TMEM38A-202ENST00000595452 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
TMEM38A-202ENST00000595452 WNK3Q9BYP7 1800 aa18.85■□□□□ 0.61
TMEM38A-202ENST00000595452 CGNL1Q0VF96 1302 aa18.84■□□□□ 0.61
TMEM38A-202ENST00000595452 PARP4Q9UKK3 1724 aaKnown RBP18.84■□□□□ 0.61
TMEM38A-202ENST00000595452 SF3B2Q13435 895 aaKnown RBP18.84■□□□□ 0.61
TMEM38A-202ENST00000595452 CDCA7Q9BWT1 371 aaPredicted RBP18.82■□□□□ 0.6
TMEM38A-202ENST00000595452 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
TMEM38A-202ENST00000595452 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
TMEM38A-202ENST00000595452 FYB1O15117 783 aa18.81■□□□□ 0.6
TMEM38A-202ENST00000595452 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
TMEM38A-202ENST00000595452 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
TMEM38A-202ENST00000595452 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
TMEM38A-202ENST00000595452 AMPHP49418 695 aa18.8■□□□□ 0.6
TMEM38A-202ENST00000595452 AXIN2Q9Y2T1 843 aa18.8■□□□□ 0.6
TMEM38A-202ENST00000595452 RGPD1P0DJD0 1748 aa18.8■□□□□ 0.6
TMEM38A-202ENST00000595452 ERBB3P21860 1342 aa18.79■□□□□ 0.6
TMEM38A-202ENST00000595452 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
TMEM38A-202ENST00000595452 CARD10Q9BWT7 1032 aa18.79■□□□□ 0.6
TMEM38A-202ENST00000595452 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
TMEM38A-202ENST00000595452 ANKRD24Q8TF21 1146 aa18.77■□□□□ 0.6
TMEM38A-202ENST00000595452 IP6K1Q92551 441 aa18.77■□□□□ 0.6
TMEM38A-202ENST00000595452 CARD14Q9BXL6 1004 aa18.77■□□□□ 0.6
TMEM38A-202ENST00000595452 LRRC37A3O60309 1634 aa18.77■□□□□ 0.6
TMEM38A-202ENST00000595452 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.6
TMEM38A-202ENST00000595452 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
TMEM38A-202ENST00000595452 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
TMEM38A-202ENST00000595452 NSD2O96028 1365 aa18.76■□□□□ 0.59
TMEM38A-202ENST00000595452 DDB1Q16531 1140 aa18.75■□□□□ 0.59
TMEM38A-202ENST00000595452 FAM196AQ6ZSG2 479 aa18.75■□□□□ 0.59
TMEM38A-202ENST00000595452 PANK3Q9H999 370 aa18.74■□□□□ 0.59
TMEM38A-202ENST00000595452 FLT4P35916 1363 aa18.73■□□□□ 0.59
TMEM38A-202ENST00000595452 HOXC9P31274 260 aa18.73■□□□□ 0.59
TMEM38A-202ENST00000595452 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
TMEM38A-202ENST00000595452 OVOS2A0A0G2JMS6 1433 aa18.73■□□□□ 0.59
TMEM38A-202ENST00000595452 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
TMEM38A-202ENST00000595452 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
TMEM38A-202ENST00000595452 BAG6P46379 1132 aa18.71■□□□□ 0.59
TMEM38A-202ENST00000595452 RRS1Q15050 365 aaKnown RBP18.71■□□□□ 0.59
TMEM38A-202ENST00000595452 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
TMEM38A-202ENST00000595452 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
TMEM38A-202ENST00000595452 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
TMEM38A-202ENST00000595452 DISP2A7MBM2 1401 aa18.69■□□□□ 0.58
TMEM38A-202ENST00000595452 EXOC5O00471 708 aa18.69■□□□□ 0.58
TMEM38A-202ENST00000595452 IL2RBP14784 551 aa18.69■□□□□ 0.58
TMEM38A-202ENST00000595452 INSRP06213 1382 aa18.68■□□□□ 0.58
TMEM38A-202ENST00000595452 FAM182BQ5T319 152 aa18.68■□□□□ 0.58
TMEM38A-202ENST00000595452 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
TMEM38A-202ENST00000595452 RGPD2P0DJD1 1756 aa18.66■□□□□ 0.58
TMEM38A-202ENST00000595452 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
TMEM38A-202ENST00000595452 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
TMEM38A-202ENST00000595452 FBLN1P23142 703 aa18.64■□□□□ 0.57
TMEM38A-202ENST00000595452 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
TMEM38A-202ENST00000595452 TRIM37O94972 964 aa18.63■□□□□ 0.57
TMEM38A-202ENST00000595452 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
TMEM38A-202ENST00000595452 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
TMEM38A-202ENST00000595452 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
TMEM38A-202ENST00000595452 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
TMEM38A-202ENST00000595452 BCL9O00512 1426 aa18.62■□□□□ 0.57
TMEM38A-202ENST00000595452 WASHC2AQ641Q2 1341 aa18.61■□□□□ 0.57
TMEM38A-202ENST00000595452 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
TMEM38A-202ENST00000595452 DEFB132Q7Z7B7 95 aa18.61■□□□□ 0.57
TMEM38A-202ENST00000595452 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
TMEM38A-202ENST00000595452 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
TMEM38A-202ENST00000595452 APBA3O96018 575 aa18.6■□□□□ 0.57
TMEM38A-202ENST00000595452 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
TMEM38A-202ENST00000595452 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
TMEM38A-202ENST00000595452 MARCH10Q8NA82 808 aaPredicted RBP18.58■□□□□ 0.56
TMEM38A-202ENST00000595452 POLKQ9UBT6 870 aa18.58■□□□□ 0.56
TMEM38A-202ENST00000595452 NHSQ6T4R5 1651 aa18.57■□□□□ 0.56
TMEM38A-202ENST00000595452 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
TMEM38A-202ENST00000595452 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
TMEM38A-202ENST00000595452 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
TMEM38A-202ENST00000595452 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
TMEM38A-202ENST00000595452 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
TMEM38A-202ENST00000595452 MEGF6O75095 1541 aa18.55■□□□□ 0.56
TMEM38A-202ENST00000595452 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
TMEM38A-202ENST00000595452 EN1Q05925 392 aaPredicted RBP18.55■□□□□ 0.56
TMEM38A-202ENST00000595452 RREB1Q92766 1687 aa18.54■□□□□ 0.56
TMEM38A-202ENST00000595452 ZCRB1Q8TBF4 217 aaKnown RBP18.54■□□□□ 0.56
TMEM38A-202ENST00000595452 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
TMEM38A-202ENST00000595452 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms