RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 HSP90AB2PQ58FF8 381 aa24.57■■□□□ 1.52
GTF2F1-205ENST00000595047 CFAP53Q96M91 514 aa24.57■■□□□ 1.52
GTF2F1-205ENST00000595047 BTG4Q9NY30 223 aa24.57■■□□□ 1.52
GTF2F1-205ENST00000595047 SMG6Q86US8 1419 aaKnown RBP24.57■■□□□ 1.52
GTF2F1-205ENST00000595047 EVA1CP58658 441 aa24.54■■□□□ 1.52
GTF2F1-205ENST00000595047 LTV1Q96GA3 475 aaPredicted RBP24.54■■□□□ 1.52
GTF2F1-205ENST00000595047 INSRP06213 1382 aa24.54■■□□□ 1.52
GTF2F1-205ENST00000595047 MIER1Q8N108 512 aa24.54■■□□□ 1.52
GTF2F1-205ENST00000595047 BLMP54132 1417 aaPredicted RBP24.53■■□□□ 1.52
GTF2F1-205ENST00000595047 ANKRD24Q8TF21 1146 aa24.53■■□□□ 1.52
GTF2F1-205ENST00000595047 CDK12Q9NYV4 1490 aaPredicted RBP24.52■■□□□ 1.52
GTF2F1-205ENST00000595047 CSB-PGBD3P0DP91 1061 aa24.52■■□□□ 1.52
GTF2F1-205ENST00000595047 FNBP4Q8N3X1 1017 aaPredicted RBP24.52■■□□□ 1.52
GTF2F1-205ENST00000595047 STRN4Q9NRL3 753 aa24.52■■□□□ 1.52
GTF2F1-205ENST00000595047 ABCC6O95255 1503 aa24.51■■□□□ 1.51
GTF2F1-205ENST00000595047 AFF2P51816 1311 aa24.5■■□□□ 1.51
GTF2F1-205ENST00000595047 DIAPH1O60610 1272 aaKnown RBP24.5■■□□□ 1.51
GTF2F1-205ENST00000595047 EIF4A2Q14240 407 aaKnown RBP24.5■■□□□ 1.51
GTF2F1-205ENST00000595047 USP21Q9UK80 565 aa24.5■■□□□ 1.51
GTF2F1-205ENST00000595047 COL14A1Q05707 1796 aaKnown RBP24.5■■□□□ 1.51
GTF2F1-205ENST00000595047 CAMTA1Q9Y6Y1 1673 aa24.49■■□□□ 1.51
GTF2F1-205ENST00000595047 SLIT2O94813 1529 aa24.49■■□□□ 1.51
GTF2F1-205ENST00000595047 UNC5CLQ8IV45 518 aa24.49■■□□□ 1.51
GTF2F1-205ENST00000595047 PEAK1Q9H792 1746 aa24.49■■□□□ 1.51
GTF2F1-205ENST00000595047 ERBB3P21860 1342 aa24.48■■□□□ 1.51
GTF2F1-205ENST00000595047 LTN1O94822 1766 aa24.47■■□□□ 1.51
GTF2F1-205ENST00000595047 MAP2P11137 1827 aaKnown RBP24.47■■□□□ 1.51
GTF2F1-205ENST00000595047 COL5A2P05997 1499 aaPredicted RBP24.46■■□□□ 1.51
GTF2F1-205ENST00000595047 IL13P35225 146 aa24.46■■□□□ 1.51
GTF2F1-205ENST00000595047 CCDC184Q52MB2 194 aa24.46■■□□□ 1.51
GTF2F1-205ENST00000595047 MRS2Q9HD23 443 aa24.46■■□□□ 1.51
GTF2F1-205ENST00000595047 WDR17Q8IZU2 1322 aa24.46■■□□□ 1.51
GTF2F1-205ENST00000595047 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
GTF2F1-205ENST00000595047 LARP1Q6PKG0 1096 aaKnown RBP24.45■■□□□ 1.5
GTF2F1-205ENST00000595047 TOM1L2Q6ZVM7 507 aa24.45■■□□□ 1.5
GTF2F1-205ENST00000595047 NLRP2Q9NX02 1062 aa24.45■■□□□ 1.5
GTF2F1-205ENST00000595047 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
GTF2F1-205ENST00000595047 COL18A1P39060 1754 aa24.45■■□□□ 1.5
GTF2F1-205ENST00000595047 BCL9LQ86UU0 1499 aa24.44■■□□□ 1.5
GTF2F1-205ENST00000595047 CCER2I3L3R5 266 aa24.43■■□□□ 1.5
GTF2F1-205ENST00000595047 U2SURPO15042 1029 aaKnown RBP24.43■■□□□ 1.5
GTF2F1-205ENST00000595047 CCDC9Q9Y3X0 531 aaKnown RBP24.43■■□□□ 1.5
GTF2F1-205ENST00000595047 NBPF6Q5VWK0 638 aa24.42■■□□□ 1.5
GTF2F1-205ENST00000595047 NBPF4Q96M43 638 aa24.42■■□□□ 1.5
GTF2F1-205ENST00000595047 EYA1Q99502 592 aa24.42■■□□□ 1.5
GTF2F1-205ENST00000595047 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
GTF2F1-205ENST00000595047 COL3A1P02461 1466 aaPredicted RBP24.41■■□□□ 1.5
GTF2F1-205ENST00000595047 VPS72Q15906 364 aa24.41■■□□□ 1.5
GTF2F1-205ENST00000595047 ZNF772Q68DY9 489 aaPredicted RBP24.41■■□□□ 1.5
GTF2F1-205ENST00000595047 CARD10Q9BWT7 1032 aa24.4■■□□□ 1.5
GTF2F1-205ENST00000595047 USP35Q9P2H5 1018 aa24.39■■□□□ 1.49
GTF2F1-205ENST00000595047 TRPC5Q9UL62 973 aaPredicted RBP24.39■■□□□ 1.49
GTF2F1-205ENST00000595047 PLCH1Q4KWH8 1693 aa24.39■■□□□ 1.49
GTF2F1-205ENST00000595047 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
GTF2F1-205ENST00000595047 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
GTF2F1-205ENST00000595047 WDR43Q15061 677 aaKnown RBP eCLIP24.38■■□□□ 1.497e-9■■■□□ 16.9
GTF2F1-205ENST00000595047 USHBP1Q8N6Y0 703 aa24.38■■□□□ 1.49
GTF2F1-205ENST00000595047 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
GTF2F1-205ENST00000595047 CRB1P82279 1406 aa24.38■■□□□ 1.49
GTF2F1-205ENST00000595047 SPATA31A5Q5VU36 1347 aa24.36■■□□□ 1.49
GTF2F1-205ENST00000595047 SPATA31A7Q8IWB4 1347 aa24.36■■□□□ 1.49
GTF2F1-205ENST00000595047 IGSF1Q8N6C5 1336 aa24.36■■□□□ 1.49
GTF2F1-205ENST00000595047 NWD2Q9ULI1 1742 aa24.35■■□□□ 1.49
GTF2F1-205ENST00000595047 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
GTF2F1-205ENST00000595047 SULT6B1Q6IMI4 303 aa24.35■■□□□ 1.49
GTF2F1-205ENST00000595047 TCP11L2Q8N4U5 519 aa24.34■■□□□ 1.49
GTF2F1-205ENST00000595047 ATRNO75882 1429 aa24.33■■□□□ 1.49
GTF2F1-205ENST00000595047 HMOX1P09601 288 aa24.33■■□□□ 1.49
GTF2F1-205ENST00000595047 PNISRQ8TF01 805 aaKnown RBP24.33■■□□□ 1.49
GTF2F1-205ENST00000595047 RGPD5Q99666 1765 aa24.32■■□□□ 1.48
GTF2F1-205ENST00000595047 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
GTF2F1-205ENST00000595047 GJD4Q96KN9 370 aaPredicted RBP24.32■■□□□ 1.48
GTF2F1-205ENST00000595047 THRAP3Q9Y2W1 955 aaKnown RBP24.32■■□□□ 1.48
GTF2F1-205ENST00000595047 AEBP1Q8IUX7 1158 aa24.31■■□□□ 1.48
GTF2F1-205ENST00000595047 RGS17Q9UGC6 210 aaPredicted RBP24.31■■□□□ 1.48
GTF2F1-205ENST00000595047 ADAMTS8Q9UP79 889 aa24.3■■□□□ 1.48
GTF2F1-205ENST00000595047 RAPGEF4Q8WZA2 1011 aa24.29■■□□□ 1.48
GTF2F1-205ENST00000595047 FCHSD2O94868 740 aa24.29■■□□□ 1.48
GTF2F1-205ENST00000595047 FAM9BQ8IZU0 186 aa24.29■■□□□ 1.48
GTF2F1-205ENST00000595047 NCAPD2Q15021 1401 aa24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 IL2RBP14784 551 aa24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 TATP17735 454 aaPredicted RBP24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 FAM98CQ17RN3 349 aaKnown RBP24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 BARGINQ6ZT62 677 aa24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 RSPH6AQ9H0K4 717 aa24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 PNNQ9H307 717 aaKnown RBP24.27■■□□□ 1.48
GTF2F1-205ENST00000595047 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.26■■□□□ 1.47
GTF2F1-205ENST00000595047 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
GTF2F1-205ENST00000595047 RBM6P78332 1123 aaKnown RBP24.26■■□□□ 1.47
GTF2F1-205ENST00000595047 KDRP35968 1356 aa24.26■■□□□ 1.47
GTF2F1-205ENST00000595047 FAM208AQ9UK61 1670 aaKnown RBP24.25■■□□□ 1.47
GTF2F1-205ENST00000595047 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
GTF2F1-205ENST00000595047 CDCA7Q9BWT1 371 aaPredicted RBP24.25■■□□□ 1.47
GTF2F1-205ENST00000595047 RXRBP28702 533 aa24.24■■□□□ 1.47
GTF2F1-205ENST00000595047 A0A0G2JS52 829 aa24.23■■□□□ 1.47
GTF2F1-205ENST00000595047 MYT1Q01538 1121 aa24.23■■□□□ 1.47
GTF2F1-205ENST00000595047 RGPD1P0DJD0 1748 aa24.22■■□□□ 1.47
GTF2F1-205ENST00000595047 NEFMP07197 916 aa24.22■■□□□ 1.47
GTF2F1-205ENST00000595047 CCDC146Q8IYE0 955 aa24.21■■□□□ 1.47
GTF2F1-205ENST00000595047 DISP2A7MBM2 1401 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms