RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 USP35Q9P2H5 1018 aa31.25■■■□□ 2.59
GTF2F1-204ENST00000594965 OVOS2A0A0J9YW53 1432 aa31.24■■■□□ 2.59
GTF2F1-204ENST00000594965 OVOS2Q6IE36 1432 aa31.24■■■□□ 2.59
GTF2F1-204ENST00000594965 BARGINQ6ZT62 677 aa31.23■■■□□ 2.59
GTF2F1-204ENST00000594965 CRB1P82279 1406 aa31.22■■■□□ 2.59
GTF2F1-204ENST00000594965 ABCC6O95255 1503 aa31.21■■■□□ 2.59
GTF2F1-204ENST00000594965 CDCA8Q53HL2 280 aa31.21■■■□□ 2.59
GTF2F1-204ENST00000594965 WNK3Q9BYP7 1800 aa31.2■■■□□ 2.59
GTF2F1-204ENST00000594965 CCDC125Q86Z20 511 aa31.2■■■□□ 2.59
GTF2F1-204ENST00000594965 TCP11L2Q8N4U5 519 aa31.2■■■□□ 2.59
GTF2F1-204ENST00000594965 PARP4Q9UKK3 1724 aaKnown RBP31.19■■■□□ 2.58
GTF2F1-204ENST00000594965 BLMP54132 1417 aaPredicted RBP31.18■■■□□ 2.58
GTF2F1-204ENST00000594965 THRAP3Q9Y2W1 955 aaKnown RBP31.17■■■□□ 2.58
GTF2F1-204ENST00000594965 FAM182BQ5T319 152 aa31.16■■■□□ 2.58
GTF2F1-204ENST00000594965 KIF20BQ96Q89 1820 aa31.16■■■□□ 2.58
GTF2F1-204ENST00000594965 WDR17Q8IZU2 1322 aa31.16■■■□□ 2.58
GTF2F1-204ENST00000594965 HSPA5P11021 654 aaKnown RBP31.15■■■□□ 2.58
GTF2F1-204ENST00000594965 EIF4G2P78344 907 aaKnown RBP eCLIP31.14■■■□□ 2.58
GTF2F1-204ENST00000594965 TOM1L2Q6ZVM7 507 aa31.12■■■□□ 2.57
GTF2F1-204ENST00000594965 RGPD1P0DJD0 1748 aa31.12■■■□□ 2.57
GTF2F1-204ENST00000594965 LRRC37A3O60309 1634 aa31.1■■■□□ 2.57
GTF2F1-204ENST00000594965 FYB1O15117 783 aa31.09■■■□□ 2.57
GTF2F1-204ENST00000594965 COG3Q96JB2 828 aa31.09■■■□□ 2.57
GTF2F1-204ENST00000594965 TNS1Q9HBL0 1735 aaKnown RBP31.09■■■□□ 2.57
GTF2F1-204ENST00000594965 CARD14Q9BXL6 1004 aa31.08■■■□□ 2.57
GTF2F1-204ENST00000594965 DEFB132Q7Z7B7 95 aa31.06■■■□□ 2.56
GTF2F1-204ENST00000594965 CSB-PGBD3P0DP91 1061 aa31.05■■■□□ 2.56
GTF2F1-204ENST00000594965 FBLN1P23142 703 aa31.05■■■□□ 2.56
GTF2F1-204ENST00000594965 CARD10Q9BWT7 1032 aa31.05■■■□□ 2.56
GTF2F1-204ENST00000594965 GGNBP2Q9H3C7 697 aa31.05■■■□□ 2.56
GTF2F1-204ENST00000594965 ERBB3P21860 1342 aa31.03■■■□□ 2.56
GTF2F1-204ENST00000594965 PDE3BQ13370 1112 aa31.03■■■□□ 2.56
GTF2F1-204ENST00000594965 NSD3Q9BZ95 1437 aa31.03■■■□□ 2.56
GTF2F1-204ENST00000594965 PEAK1Q9H792 1746 aa31.03■■■□□ 2.56
GTF2F1-204ENST00000594965 DISP2A7MBM2 1401 aa31.02■■■□□ 2.56
GTF2F1-204ENST00000594965 SF3B2Q13435 895 aaKnown RBP31.02■■■□□ 2.56
GTF2F1-204ENST00000594965 FAM196AQ6ZSG2 479 aa31.01■■■□□ 2.55
GTF2F1-204ENST00000594965 IP6K1Q92551 441 aa31■■■□□ 2.55
GTF2F1-204ENST00000594965 MAP3K19Q56UN5 1328 aa30.99■■■□□ 2.55
GTF2F1-204ENST00000594965 POLR3GLQ9BT43 218 aa30.99■■■□□ 2.55
GTF2F1-204ENST00000594965 CCDC7Q96M83 1385 aa30.99■■■□□ 2.55
GTF2F1-204ENST00000594965 SBF2Q86WG5 1849 aa30.98■■■□□ 2.55
GTF2F1-204ENST00000594965 RGPD2P0DJD1 1756 aa30.98■■■□□ 2.55
GTF2F1-204ENST00000594965 FAM208AQ9UK61 1670 aaKnown RBP30.98■■■□□ 2.55
GTF2F1-204ENST00000594965 C11orf95C9JLR9 678 aaPredicted RBP30.98■■■□□ 2.55
GTF2F1-204ENST00000594965 ANKRD24Q8TF21 1146 aa30.98■■■□□ 2.55
GTF2F1-204ENST00000594965 DDB1Q16531 1140 aa30.95■■■□□ 2.55
GTF2F1-204ENST00000594965 CDCA7Q9BWT1 371 aaPredicted RBP30.95■■■□□ 2.55
GTF2F1-204ENST00000594965 TRIM37O94972 964 aa30.94■■■□□ 2.54
GTF2F1-204ENST00000594965 HOXC9P31274 260 aa30.94■■■□□ 2.54
GTF2F1-204ENST00000594965 RRS1Q15050 365 aaKnown RBP30.93■■■□□ 2.54
GTF2F1-204ENST00000594965 NLRP2Q9NX02 1062 aa30.93■■■□□ 2.54
GTF2F1-204ENST00000594965 ANKRD26Q9UPS8 1709 aa30.93■■■□□ 2.54
GTF2F1-204ENST00000594965 BAG6P46379 1132 aa30.92■■■□□ 2.54
GTF2F1-204ENST00000594965 AMPHP49418 695 aa30.91■■■□□ 2.54
GTF2F1-204ENST00000594965 OVOS2A0A0G2JMS6 1433 aa30.9■■■□□ 2.54
GTF2F1-204ENST00000594965 EN1Q05925 392 aaPredicted RBP30.9■■■□□ 2.54
GTF2F1-204ENST00000594965 RTL1A6NKG5 1358 aa30.9■■■□□ 2.54
GTF2F1-204ENST00000594965 MAP2P11137 1827 aaKnown RBP30.89■■■□□ 2.54
GTF2F1-204ENST00000594965 MARCH10Q8NA82 808 aaPredicted RBP30.89■■■□□ 2.54
GTF2F1-204ENST00000594965 LTV1Q96GA3 475 aaPredicted RBP30.89■■■□□ 2.54
GTF2F1-204ENST00000594965 PANK3Q9H999 370 aa30.86■■■□□ 2.53
GTF2F1-204ENST00000594965 TNS2Q63HR2 1409 aa30.86■■■□□ 2.53
GTF2F1-204ENST00000594965 CGNL1Q0VF96 1302 aa30.85■■■□□ 2.53
GTF2F1-204ENST00000594965 EXOC5O00471 708 aa30.84■■■□□ 2.53
GTF2F1-204ENST00000594965 IL2RBP14784 551 aa30.84■■■□□ 2.53
GTF2F1-204ENST00000594965 BCL9O00512 1426 aa30.83■■■□□ 2.53
GTF2F1-204ENST00000594965 RREB1Q92766 1687 aa30.82■■■□□ 2.52
GTF2F1-204ENST00000594965 APBA3O96018 575 aa30.82■■■□□ 2.52
GTF2F1-204ENST00000594965 EZH2Q15910 746 aaKnown RBP30.81■■■□□ 2.52
GTF2F1-204ENST00000594965 CAMKK2Q96RR4 588 aa30.81■■■□□ 2.52
GTF2F1-204ENST00000594965 KIF24Q5T7B8 1368 aa30.8■■■□□ 2.52
GTF2F1-204ENST00000594965 KIF7Q2M1P5 1343 aa30.8■■■□□ 2.52
GTF2F1-204ENST00000594965 FLT4P35916 1363 aa30.79■■■□□ 2.52
GTF2F1-204ENST00000594965 HSP90AB2PQ58FF8 381 aa30.79■■■□□ 2.52
GTF2F1-204ENST00000594965 EMILIN1Q9Y6C2 1016 aa30.79■■■□□ 2.52
GTF2F1-204ENST00000594965 INSRP06213 1382 aa30.79■■■□□ 2.52
GTF2F1-204ENST00000594965 SHANK3Q9BYB0 1731 aa30.78■■■□□ 2.52
GTF2F1-204ENST00000594965 PTF1AQ7RTS3 328 aa30.77■■■□□ 2.52
GTF2F1-204ENST00000594965 NUP188Q5SRE5 1749 aa30.76■■■□□ 2.52
GTF2F1-204ENST00000594965 NBPF6Q5VWK0 638 aa30.76■■■□□ 2.51
GTF2F1-204ENST00000594965 NBPF4Q96M43 638 aa30.76■■■□□ 2.51
GTF2F1-204ENST00000594965 RGPD3A6NKT7 1758 aaPredicted RBP30.76■■■□□ 2.51
GTF2F1-204ENST00000594965 RGPD4Q7Z3J3 1758 aa30.76■■■□□ 2.51
GTF2F1-204ENST00000594965 PARD3Q8TEW0 1356 aa30.73■■■□□ 2.51
GTF2F1-204ENST00000594965 NHSQ6T4R5 1651 aa30.73■■■□□ 2.51
GTF2F1-204ENST00000594965 BCL11BQ9C0K0 894 aaPredicted RBP30.72■■■□□ 2.51
GTF2F1-204ENST00000594965 MEGF6O75095 1541 aa30.72■■■□□ 2.51
GTF2F1-204ENST00000594965 SMG6Q86US8 1419 aaKnown RBP30.72■■■□□ 2.51
GTF2F1-204ENST00000594965 USHBP1Q8N6Y0 703 aa30.7■■■□□ 2.51
GTF2F1-204ENST00000594965 POLKQ9UBT6 870 aa30.7■■■□□ 2.51
GTF2F1-204ENST00000594965 NSD2O96028 1365 aa30.68■■■□□ 2.5
GTF2F1-204ENST00000594965 KAT6BQ8WYB5 2073 aa30.68■■■□□ 2.5
GTF2F1-204ENST00000594965 WASHC2AQ641Q2 1341 aa30.68■■■□□ 2.5
GTF2F1-204ENST00000594965 PPM1GO15355 546 aaPredicted RBP30.67■■■□□ 2.5
GTF2F1-204ENST00000594965 TNNT2P45379 298 aaPredicted RBP30.66■■■□□ 2.5
GTF2F1-204ENST00000594965 PLSCR1O15162 318 aa30.65■■■□□ 2.5
GTF2F1-204ENST00000594965 KCNQ2O43526 872 aa30.65■■■□□ 2.5
GTF2F1-204ENST00000594965 BTAF1O14981 1849 aa30.64■■■□□ 2.5
GTF2F1-204ENST00000594965 PSDA5PKW4 1024 aaPredicted RBP30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 227.7 ms