RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.17
LINC01539-206ENST00000593282 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
LINC01539-206ENST00000593282 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
LINC01539-206ENST00000593282 GPKOWQ92917 476 aaPredicted RBP eCLIP7.76□□□□□ -1.17
LINC01539-206ENST00000593282 SH3BP5LQ7L8J4 393 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 CCDC116Q8IYX3 515 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 MAP4K5Q9Y4K4 846 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 TRMT44Q8IYL2 757 aaKnown RBP7.74□□□□□ -1.17
LINC01539-206ENST00000593282 CTDSPL2Q05D32 466 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 SLC10A4Q96EP9 437 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 ARHGAP9Q9BRR9 750 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
LINC01539-206ENST00000593282 ZMYND15Q9H091 742 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 ERFEQ4G0M1 354 aa7.72□□□□□ -1.17
LINC01539-206ENST00000593282 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
LINC01539-206ENST00000593282 PPFIA3O75145 1194 aa7.7□□□□□ -1.18
LINC01539-206ENST00000593282 LRRN4Q8WUT4 740 aa7.7□□□□□ -1.18
LINC01539-206ENST00000593282 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
LINC01539-206ENST00000593282 CDV3Q9UKY7 258 aaKnown RBP7.7□□□□□ -1.18
LINC01539-206ENST00000593282 SOS2Q07890 1332 aaPredicted RBP7.7□□□□□ -1.18
LINC01539-206ENST00000593282 TTLL8A6PVC2 850 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 VSIG8P0DPA2 414 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.69□□□□□ -1.18
LINC01539-206ENST00000593282 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
LINC01539-206ENST00000593282 PDXDC2PQ6P474 469 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 DNMT3LQ9UJW3 386 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 DHX9Q08211 1270 aaKnown RBP7.68□□□□□ -1.18
LINC01539-206ENST00000593282 NR6A1Q15406 480 aa7.68□□□□□ -1.18
LINC01539-206ENST00000593282 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
LINC01539-206ENST00000593282 PNMA1Q8ND90 353 aa7.68□□□□□ -1.18
LINC01539-206ENST00000593282 DDRGK1Q96HY6 314 aa7.68□□□□□ -1.18
LINC01539-206ENST00000593282 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
LINC01539-206ENST00000593282 AP1G2O75843 785 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
LINC01539-206ENST00000593282 PTK2Q05397 1052 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 CBLBQ13191 982 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 SH3D19Q5HYK7 790 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 ZC3H4Q9UPT8 1303 aaKnown RBP7.67□□□□□ -1.18
LINC01539-206ENST00000593282 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
LINC01539-206ENST00000593282 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
LINC01539-206ENST00000593282 RAB15P59190 212 aa7.64□□□□□ -1.19
LINC01539-206ENST00000593282 PTSQ03393 145 aa7.64□□□□□ -1.19
LINC01539-206ENST00000593282 RELBQ01201 579 aa7.63□□□□□ -1.19
LINC01539-206ENST00000593282 NBPF20Q3BBV1 942 aa7.63□□□□□ -1.19
LINC01539-206ENST00000593282 INTS6LQ5JSJ4 861 aaKnown RBP7.63□□□□□ -1.19
LINC01539-206ENST00000593282 Q6ZVU0 165 aa7.63□□□□□ -1.19
LINC01539-206ENST00000593282 SPINT1O43278 529 aa7.62□□□□□ -1.19
LINC01539-206ENST00000593282 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
LINC01539-206ENST00000593282 ADAM32Q8TC27 787 aa7.62□□□□□ -1.19
LINC01539-206ENST00000593282 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
LINC01539-206ENST00000593282 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.62□□□□□ -1.19
LINC01539-206ENST00000593282 POLMQ9NP87 494 aaPredicted RBP7.62□□□□□ -1.19
LINC01539-206ENST00000593282 PPP2R2DQ66LE6 453 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 CNTNAP3BQ96NU0 1288 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 CNTNAP3Q9BZ76 1288 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 GPSM3Q9Y4H4 160 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 CDC14CA4D256 554 aa7.6□□□□□ -1.19
LINC01539-206ENST00000593282 USP17L8P0C7I0 530 aa7.6□□□□□ -1.19
LINC01539-206ENST00000593282 FBXO31Q5XUX0 539 aaPredicted RBP7.6□□□□□ -1.19
LINC01539-206ENST00000593282 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
LINC01539-206ENST00000593282 INSM2Q96T92 566 aaPredicted RBP7.59□□□□□ -1.19
LINC01539-206ENST00000593282 C1orf115Q9H7X2 142 aa7.59□□□□□ -1.19
LINC01539-206ENST00000593282 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
LINC01539-206ENST00000593282 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
LINC01539-206ENST00000593282 ZNF395Q9H8N7 513 aaPredicted RBP7.58□□□□□ -1.2
LINC01539-206ENST00000593282 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
LINC01539-206ENST00000593282 GPR161Q8N6U8 529 aaKnown RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 ZNF784Q8NCA9 323 aaPredicted RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
LINC01539-206ENST00000593282 OCSTAMPQ9BR26 566 aa7.57□□□□□ -1.2
LINC01539-206ENST00000593282 COL25A1Q9BXS0 654 aaPredicted RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 GOPCQ9HD26 462 aa7.57□□□□□ -1.2
LINC01539-206ENST00000593282 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 ADH1AP07327 375 aa7.56□□□□□ -1.2
LINC01539-206ENST00000593282 ITGA6P23229 1130 aa7.56□□□□□ -1.2
LINC01539-206ENST00000593282 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
LINC01539-206ENST00000593282 ARID3AQ99856 593 aa7.56□□□□□ -1.2
LINC01539-206ENST00000593282 SLC35F4A4IF30 521 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 ERVH48-1M5A8F1 160 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 RFC5P40937 340 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 KRT76Q01546 638 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 RNF225M0QZC1 329 aaPredicted RBP7.54□□□□□ -1.2
LINC01539-206ENST00000593282 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
LINC01539-206ENST00000593282 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
LINC01539-206ENST00000593282 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
LINC01539-206ENST00000593282 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
LINC01539-206ENST00000593282 ZBTB7CA1YPR0 619 aa7.53□□□□□ -1.2
LINC01539-206ENST00000593282 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
LINC01539-206ENST00000593282 PTGIRP43119 386 aa7.52□□□□□ -1.21
LINC01539-206ENST00000593282 PCDHB9Q9Y5E1 797 aa7.52□□□□□ -1.21
LINC01539-206ENST00000593282 KCNMA1Q12791 1236 aa7.51□□□□□ -1.21
LINC01539-206ENST00000593282 RNFT1Q5M7Z0 435 aa7.51□□□□□ -1.21
LINC01539-206ENST00000593282 LYSMD3Q7Z3D4 306 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms