RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 SPATA31A7Q8IWB4 1347 aa16.44■□□□□ 0.22
H3F3B-212ENST00000592643 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
H3F3B-212ENST00000592643 LARP1Q6PKG0 1096 aaKnown RBP16.42■□□□□ 0.22
H3F3B-212ENST00000592643 SOCS7O14512 581 aa16.41■□□□□ 0.22
H3F3B-212ENST00000592643 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
H3F3B-212ENST00000592643 COG3Q96JB2 828 aa16.41■□□□□ 0.22
H3F3B-212ENST00000592643 STRN4Q9NRL3 753 aa16.41■□□□□ 0.22
H3F3B-212ENST00000592643 EP400Q96L91 3159 aa16.41■□□□□ 0.22
H3F3B-212ENST00000592643 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
H3F3B-212ENST00000592643 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
H3F3B-212ENST00000592643 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
H3F3B-212ENST00000592643 ABCC6O95255 1503 aa16.37■□□□□ 0.21
H3F3B-212ENST00000592643 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
H3F3B-212ENST00000592643 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
H3F3B-212ENST00000592643 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
H3F3B-212ENST00000592643 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
H3F3B-212ENST00000592643 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
H3F3B-212ENST00000592643 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
H3F3B-212ENST00000592643 CCDC9Q9Y3X0 531 aaKnown RBP16.36■□□□□ 0.21
H3F3B-212ENST00000592643 IP6K1Q92551 441 aa16.35■□□□□ 0.21
H3F3B-212ENST00000592643 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
H3F3B-212ENST00000592643 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
H3F3B-212ENST00000592643 PEAK1Q9H792 1746 aa16.34■□□□□ 0.21
H3F3B-212ENST00000592643 HOXC9P31274 260 aa16.34■□□□□ 0.21
H3F3B-212ENST00000592643 EVA1CP58658 441 aa16.34■□□□□ 0.21
H3F3B-212ENST00000592643 ERBB3P21860 1342 aa16.34■□□□□ 0.21
H3F3B-212ENST00000592643 CRB1P82279 1406 aa16.34■□□□□ 0.21
H3F3B-212ENST00000592643 LTN1O94822 1766 aa16.33■□□□□ 0.21
H3F3B-212ENST00000592643 RGPD5Q99666 1765 aa16.33■□□□□ 0.21
H3F3B-212ENST00000592643 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
H3F3B-212ENST00000592643 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
H3F3B-212ENST00000592643 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
H3F3B-212ENST00000592643 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
H3F3B-212ENST00000592643 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
H3F3B-212ENST00000592643 ANKRD24Q8TF21 1146 aa16.31■□□□□ 0.2
H3F3B-212ENST00000592643 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
H3F3B-212ENST00000592643 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
H3F3B-212ENST00000592643 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
H3F3B-212ENST00000592643 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
H3F3B-212ENST00000592643 RTL1A6NKG5 1358 aa16.29■□□□□ 0.2
H3F3B-212ENST00000592643 NSD2O96028 1365 aa16.29■□□□□ 0.2
H3F3B-212ENST00000592643 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
H3F3B-212ENST00000592643 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
H3F3B-212ENST00000592643 KNSTRNQ9Y448 316 aa16.29■□□□□ 0.2
H3F3B-212ENST00000592643 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
H3F3B-212ENST00000592643 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-212ENST00000592643 THRAP3Q9Y2W1 955 aaKnown RBP16.28■□□□□ 0.2
H3F3B-212ENST00000592643 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
H3F3B-212ENST00000592643 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-212ENST00000592643 AMPHP49418 695 aa16.27■□□□□ 0.2
H3F3B-212ENST00000592643 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
H3F3B-212ENST00000592643 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-212ENST00000592643 INSRP06213 1382 aa16.26■□□□□ 0.19
H3F3B-212ENST00000592643 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
H3F3B-212ENST00000592643 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
H3F3B-212ENST00000592643 SMG6Q86US8 1419 aaKnown RBP16.26■□□□□ 0.19
H3F3B-212ENST00000592643 FLT4P35916 1363 aa16.26■□□□□ 0.19
H3F3B-212ENST00000592643 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
H3F3B-212ENST00000592643 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
H3F3B-212ENST00000592643 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
H3F3B-212ENST00000592643 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
H3F3B-212ENST00000592643 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
H3F3B-212ENST00000592643 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
H3F3B-212ENST00000592643 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
H3F3B-212ENST00000592643 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
H3F3B-212ENST00000592643 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
H3F3B-212ENST00000592643 A0A0G2JS52 829 aa16.22■□□□□ 0.19
H3F3B-212ENST00000592643 MYT1Q01538 1121 aa16.22■□□□□ 0.19
H3F3B-212ENST00000592643 LRRC37A3O60309 1634 aa16.22■□□□□ 0.19
H3F3B-212ENST00000592643 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
H3F3B-212ENST00000592643 PPM1GO15355 546 aaPredicted RBP16.21■□□□□ 0.19
H3F3B-212ENST00000592643 USHBP1Q8N6Y0 703 aa16.21■□□□□ 0.19
H3F3B-212ENST00000592643 WNK3Q9BYP7 1800 aa16.21■□□□□ 0.19
H3F3B-212ENST00000592643 RGPD2P0DJD1 1756 aa16.2■□□□□ 0.18
H3F3B-212ENST00000592643 MEGF6O75095 1541 aa16.19■□□□□ 0.18
H3F3B-212ENST00000592643 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
H3F3B-212ENST00000592643 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
H3F3B-212ENST00000592643 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
H3F3B-212ENST00000592643 CNGB1Q14028 1251 aaPredicted RBP16.18■□□□□ 0.18
H3F3B-212ENST00000592643 EYA1Q99502 592 aa16.18■□□□□ 0.18
H3F3B-212ENST00000592643 IL2RBP14784 551 aa16.17■□□□□ 0.18
H3F3B-212ENST00000592643 DDB1Q16531 1140 aa16.17■□□□□ 0.18
H3F3B-212ENST00000592643 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
H3F3B-212ENST00000592643 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
H3F3B-212ENST00000592643 MTHFSP49914 203 aa16.16■□□□□ 0.18
H3F3B-212ENST00000592643 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
H3F3B-212ENST00000592643 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
H3F3B-212ENST00000592643 OVOS2A0A0G2JMS6 1433 aa16.15■□□□□ 0.18
H3F3B-212ENST00000592643 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
H3F3B-212ENST00000592643 IL13P35225 146 aa16.14■□□□□ 0.17
H3F3B-212ENST00000592643 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
H3F3B-212ENST00000592643 BCL9O00512 1426 aa16.13■□□□□ 0.17
H3F3B-212ENST00000592643 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
H3F3B-212ENST00000592643 EXOC5O00471 708 aa16.12■□□□□ 0.17
H3F3B-212ENST00000592643 FAM196AQ6ZSG2 479 aa16.12■□□□□ 0.17
H3F3B-212ENST00000592643 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
H3F3B-212ENST00000592643 TRIM37O94972 964 aa16.11■□□□□ 0.17
H3F3B-212ENST00000592643 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
H3F3B-212ENST00000592643 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
H3F3B-212ENST00000592643 AEBP1Q8IUX7 1158 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms