RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 C14orf93Q9H972 538 aaKnown RBP17.62■□□□□ 0.41
RAVER1-204ENST00000592208 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
RAVER1-204ENST00000592208 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
RAVER1-204ENST00000592208 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
RAVER1-204ENST00000592208 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
RAVER1-204ENST00000592208 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
RAVER1-204ENST00000592208 SASS6Q6UVJ0 657 aa17.6■□□□□ 0.41
RAVER1-204ENST00000592208 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
RAVER1-204ENST00000592208 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
RAVER1-204ENST00000592208 GNL3LQ9NVN8 582 aaKnown RBP17.6■□□□□ 0.41
RAVER1-204ENST00000592208 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 FSD1Q9BTV5 496 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
RAVER1-204ENST00000592208 MYL6BP14649 208 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 BCAR3O75815 825 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 RABEP1Q15276 862 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 SRCIN1Q9C0H9 1055 aa17.59■□□□□ 0.41
RAVER1-204ENST00000592208 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
RAVER1-204ENST00000592208 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
RAVER1-204ENST00000592208 NFE2L2Q16236 605 aa17.58■□□□□ 0.41
RAVER1-204ENST00000592208 LETM1O95202 739 aaPredicted RBP17.58■□□□□ 0.4
RAVER1-204ENST00000592208 NAT10Q9H0A0 1025 aaKnown RBP17.58■□□□□ 0.4
RAVER1-204ENST00000592208 A2MP01023 1474 aa17.58■□□□□ 0.4
RAVER1-204ENST00000592208 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
RAVER1-204ENST00000592208 C1orf115Q9H7X2 142 aa17.57■□□□□ 0.4
RAVER1-204ENST00000592208 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
RAVER1-204ENST00000592208 MBD3O95983 291 aa17.57■□□□□ 0.4
RAVER1-204ENST00000592208 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
RAVER1-204ENST00000592208 CCDC43Q96MW1 224 aaKnown RBP17.57■□□□□ 0.4
RAVER1-204ENST00000592208 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
RAVER1-204ENST00000592208 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
RAVER1-204ENST00000592208 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
RAVER1-204ENST00000592208 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
RAVER1-204ENST00000592208 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
RAVER1-204ENST00000592208 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
RAVER1-204ENST00000592208 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
RAVER1-204ENST00000592208 PBRM1Q86U86 1689 aa17.56■□□□□ 0.4
RAVER1-204ENST00000592208 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
RAVER1-204ENST00000592208 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
RAVER1-204ENST00000592208 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
RAVER1-204ENST00000592208 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■□□□ 14.2
RAVER1-204ENST00000592208 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
RAVER1-204ENST00000592208 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
RAVER1-204ENST00000592208 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
RAVER1-204ENST00000592208 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
RAVER1-204ENST00000592208 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
RAVER1-204ENST00000592208 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
RAVER1-204ENST00000592208 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
RAVER1-204ENST00000592208 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
RAVER1-204ENST00000592208 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
RAVER1-204ENST00000592208 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
RAVER1-204ENST00000592208 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
RAVER1-204ENST00000592208 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
RAVER1-204ENST00000592208 PPP1R1BQ9UD71 204 aaPredicted RBP17.54■□□□□ 0.4
RAVER1-204ENST00000592208 PCMTD1Q96MG8 357 aaPredicted RBP17.53■□□□□ 0.4
RAVER1-204ENST00000592208 MCM10Q7L590 875 aa17.53■□□□□ 0.4
RAVER1-204ENST00000592208 UHRF1BP1LA0JNW5 1464 aa17.53■□□□□ 0.4
RAVER1-204ENST00000592208 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
RAVER1-204ENST00000592208 SCAF11Q99590 1463 aaKnown RBP17.53■□□□□ 0.4
RAVER1-204ENST00000592208 FYB1O15117 783 aa17.53■□□□□ 0.4
RAVER1-204ENST00000592208 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
RAVER1-204ENST00000592208 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
RAVER1-204ENST00000592208 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
RAVER1-204ENST00000592208 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
RAVER1-204ENST00000592208 PTPRKQ15262 1439 aa17.52■□□□□ 0.39
RAVER1-204ENST00000592208 DCTN1Q14203 1278 aa17.52■□□□□ 0.39
RAVER1-204ENST00000592208 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
RAVER1-204ENST00000592208 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
RAVER1-204ENST00000592208 NACAP1Q9BZK3 213 aa17.51■□□□□ 0.39
RAVER1-204ENST00000592208 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
RAVER1-204ENST00000592208 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
RAVER1-204ENST00000592208 JMYQ8N9B5 988 aa17.5■□□□□ 0.39
RAVER1-204ENST00000592208 LRRCC1Q9C099 1032 aa17.5■□□□□ 0.39
RAVER1-204ENST00000592208 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
RAVER1-204ENST00000592208 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
RAVER1-204ENST00000592208 PDZRN3Q9UPQ7 1066 aa17.5■□□□□ 0.39
RAVER1-204ENST00000592208 ACEP12821 1306 aa17.5■□□□□ 0.39
RAVER1-204ENST00000592208 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
RAVER1-204ENST00000592208 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
RAVER1-204ENST00000592208 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
RAVER1-204ENST00000592208 SIL1Q9H173 461 aa17.49■□□□□ 0.39
RAVER1-204ENST00000592208 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
RAVER1-204ENST00000592208 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
RAVER1-204ENST00000592208 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
RAVER1-204ENST00000592208 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
RAVER1-204ENST00000592208 STARD3NLO95772 234 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 TXLNAP40222 546 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 MRE11P49959 708 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 DISP1Q96F81 1524 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 NEK4P51957 841 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
RAVER1-204ENST00000592208 MPHOSPH8Q99549 860 aa17.47■□□□□ 0.39
RAVER1-204ENST00000592208 HSPA2P54652 639 aa17.46■□□□□ 0.39
RAVER1-204ENST00000592208 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
RAVER1-204ENST00000592208 CTNNA3Q9UI47 895 aa17.46■□□□□ 0.39
RAVER1-204ENST00000592208 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
RAVER1-204ENST00000592208 HOMER1Q86YM7 354 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms