RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 ZSCAN1Q8NBB4 408 aa8.4□□□□□ -1.06
TPM4-214ENST00000591645 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
TPM4-214ENST00000591645 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
TPM4-214ENST00000591645 GPSM3Q9Y4H4 160 aa8.4□□□□□ -1.06
TPM4-214ENST00000591645 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
TPM4-214ENST00000591645 NR3C2P08235 984 aa8.39□□□□□ -1.07
TPM4-214ENST00000591645 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
TPM4-214ENST00000591645 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
TPM4-214ENST00000591645 GRM5P41594 1212 aa8.38□□□□□ -1.07
TPM4-214ENST00000591645 NR5A1Q13285 461 aa8.38□□□□□ -1.07
TPM4-214ENST00000591645 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
TPM4-214ENST00000591645 C6orf118Q5T5N4 469 aa8.37□□□□□ -1.07
TPM4-214ENST00000591645 TRIM34Q9BYJ4 488 aa8.37□□□□□ -1.07
TPM4-214ENST00000591645 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
TPM4-214ENST00000591645 FAM181BA6NEQ2 426 aa8.36□□□□□ -1.07
TPM4-214ENST00000591645 ERFEQ4G0M1 354 aa8.36□□□□□ -1.07
TPM4-214ENST00000591645 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
TPM4-214ENST00000591645 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
TPM4-214ENST00000591645 PTK2Q05397 1052 aa8.35□□□□□ -1.07
TPM4-214ENST00000591645 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
TPM4-214ENST00000591645 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
TPM4-214ENST00000591645 CARD14Q9BXL6 1004 aa8.34□□□□□ -1.07
TPM4-214ENST00000591645 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
TPM4-214ENST00000591645 MAN1A2O60476 641 aa8.33□□□□□ -1.08
TPM4-214ENST00000591645 BMP2P12643 396 aa8.32□□□□□ -1.08
TPM4-214ENST00000591645 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
TPM4-214ENST00000591645 SLC10A4Q96EP9 437 aa8.32□□□□□ -1.08
TPM4-214ENST00000591645 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
TPM4-214ENST00000591645 FSHRP23945 695 aa8.31□□□□□ -1.08
TPM4-214ENST00000591645 ZBTB33Q86T24 672 aa8.31□□□□□ -1.08
TPM4-214ENST00000591645 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
TPM4-214ENST00000591645 APBB1O00213 710 aa8.3□□□□□ -1.08
TPM4-214ENST00000591645 MEIOBQ8N635 442 aa8.3□□□□□ -1.08
TPM4-214ENST00000591645 MTMR14Q8NCE2 650 aa8.3□□□□□ -1.08
TPM4-214ENST00000591645 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
TPM4-214ENST00000591645 PPFIA3O75145 1194 aa8.29□□□□□ -1.08
TPM4-214ENST00000591645 UPP2O95045 317 aa8.29□□□□□ -1.08
TPM4-214ENST00000591645 CCDC116Q8IYX3 515 aa8.28□□□□□ -1.08
TPM4-214ENST00000591645 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
TPM4-214ENST00000591645 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
TPM4-214ENST00000591645 SOS2Q07890 1332 aaPredicted RBP8.28□□□□□ -1.08
TPM4-214ENST00000591645 GPR37L1O60883 481 aa8.27□□□□□ -1.09
TPM4-214ENST00000591645 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
TPM4-214ENST00000591645 KCTD15Q96SI1 283 aaPredicted RBP8.27□□□□□ -1.09
TPM4-214ENST00000591645 ZBBXA8MT70 800 aa8.26□□□□□ -1.09
TPM4-214ENST00000591645 NDUFB9Q9Y6M9 179 aa8.26□□□□□ -1.09
TPM4-214ENST00000591645 DHX9Q08211 1270 aaKnown RBP8.25□□□□□ -1.09
TPM4-214ENST00000591645 INTS6LQ5JSJ4 861 aaKnown RBP8.25□□□□□ -1.09
TPM4-214ENST00000591645 SNRKQ9NRH2 765 aa8.25□□□□□ -1.09
TPM4-214ENST00000591645 ESPNB1AK53 854 aa8.24□□□□□ -1.09
TPM4-214ENST00000591645 FBXO45P0C2W1 286 aa8.24□□□□□ -1.09
TPM4-214ENST00000591645 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
TPM4-214ENST00000591645 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
TPM4-214ENST00000591645 CBLBQ13191 982 aa8.23□□□□□ -1.09
TPM4-214ENST00000591645 PPP1R26Q5T8A7 1209 aaPredicted RBP8.23□□□□□ -1.09
TPM4-214ENST00000591645 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
TPM4-214ENST00000591645 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
TPM4-214ENST00000591645 TTLL8A6PVC2 850 aa8.22□□□□□ -1.09
TPM4-214ENST00000591645 NR1H3Q13133 447 aa8.22□□□□□ -1.09
TPM4-214ENST00000591645 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
TPM4-214ENST00000591645 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
TPM4-214ENST00000591645 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
TPM4-214ENST00000591645 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
TPM4-214ENST00000591645 Q6ZVU0 165 aa8.21□□□□□ -1.1
TPM4-214ENST00000591645 KRT76Q01546 638 aa8.2□□□□□ -1.1
TPM4-214ENST00000591645 PTSQ03393 145 aa8.2□□□□□ -1.1
TPM4-214ENST00000591645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.1
TPM4-214ENST00000591645 CCDC125Q86Z20 511 aa8.2□□□□□ -1.1
TPM4-214ENST00000591645 PRM3Q9NNZ6 103 aa8.19□□□□□ -1.1
TPM4-214ENST00000591645 ZNF330Q9Y3S2 320 aaPredicted RBP8.19□□□□□ -1.1
TPM4-214ENST00000591645 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
TPM4-214ENST00000591645 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
TPM4-214ENST00000591645 PCDHB9Q9Y5E1 797 aa8.18□□□□□ -1.1
TPM4-214ENST00000591645 SPINT1O43278 529 aa8.17□□□□□ -1.1
TPM4-214ENST00000591645 MCM6Q14566 821 aa8.17□□□□□ -1.1
TPM4-214ENST00000591645 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
TPM4-214ENST00000591645 TBC1D2BQ9UPU7 963 aa8.17□□□□□ -1.1
TPM4-214ENST00000591645 ERVH48-1M5A8F1 160 aa8.16□□□□□ -1.1
TPM4-214ENST00000591645 GSK3AP49840 483 aa8.16□□□□□ -1.1
TPM4-214ENST00000591645 AGBL1Q96MI9 1066 aa8.16□□□□□ -1.1
TPM4-214ENST00000591645 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
TPM4-214ENST00000591645 ZNF784Q8NCA9 323 aaPredicted RBP8.15□□□□□ -1.1
TPM4-214ENST00000591645 LILRA1O75019 489 aa8.14□□□□□ -1.11
TPM4-214ENST00000591645 GIGYF1O75420 1035 aaPredicted RBP8.14□□□□□ -1.11
TPM4-214ENST00000591645 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
TPM4-214ENST00000591645 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
TPM4-214ENST00000591645 IRF5Q13568 498 aa8.14□□□□□ -1.11
TPM4-214ENST00000591645 RNF20Q5VTR2 975 aa8.14□□□□□ -1.11
TPM4-214ENST00000591645 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
TPM4-214ENST00000591645 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
TPM4-214ENST00000591645 RELBQ01201 579 aa8.13□□□□□ -1.11
TPM4-214ENST00000591645 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
TPM4-214ENST00000591645 INSM2Q96T92 566 aaPredicted RBP8.13□□□□□ -1.11
TPM4-214ENST00000591645 SLC35F4A4IF30 521 aa8.12□□□□□ -1.11
TPM4-214ENST00000591645 ADH1AP07327 375 aa8.12□□□□□ -1.11
TPM4-214ENST00000591645 RAB15P59190 212 aa8.12□□□□□ -1.11
TPM4-214ENST00000591645 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
TPM4-214ENST00000591645 NANOS1Q8WY41 292 aaKnown RBP8.12□□□□□ -1.11
TPM4-214ENST00000591645 TMEM132AQ24JP5 1023 aa8.11□□□□□ -1.11
TPM4-214ENST00000591645 VWA5B2Q8N398 1253 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms