RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ERICH2A1L162 156 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 TRDNQ13061 729 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 ANKRD24Q8TF21 1146 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 SOS1Q07889 1333 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-212ENST00000591126 IFIT2P09913 472 aaKnown RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 WAPLQ7Z5K2 1190 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 QTRT2Q9H974 415 aaKnown RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 ABCC11Q96J66 1382 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 DISP3Q9P2K9 1392 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 HIP1O00291 1037 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 MARCH6O60337 910 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 RBM6P78332 1123 aaKnown RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 CDC5LQ99459 802 aaKnown RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 SULT6B1Q6IMI4 303 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 TFCP2L1Q9NZI6 479 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 KDM5CP41229 1560 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 ARHGAP31Q2M1Z3 1444 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 KRI1Q8N9T8 703 aaKnown RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 MPHOSPH6Q99547 160 aaKnown RBP7.73□□□□□ -1.17
SMAD4-212ENST00000591126 DDX19BQ9UMR2 479 aa7.73□□□□□ -1.17
SMAD4-212ENST00000591126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMAD4-212ENST00000591126 JDP2Q8WYK2 163 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 NAP1L2Q9ULW6 460 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-212ENST00000591126 RRP7AQ9Y3A4 280 aaKnown RBP7.72□□□□□ -1.17
SMAD4-212ENST00000591126 MAST1Q9Y2H9 1570 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 GOLGA6L6A8MZA4 724 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 CCDC158Q5M9N0 1113 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 NCOA3Q9Y6Q9 1424 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 PZPP20742 1482 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 NRDCO43847 1150 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 CCT4P50991 539 aaKnown RBP7.72□□□□□ -1.17
SMAD4-212ENST00000591126 CCDC57Q2TAC2 916 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 WWC2Q6AWC2 1192 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
SMAD4-212ENST00000591126 CNNM1Q9NRU3 951 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 TMEM94Q12767 1356 aa7.72□□□□□ -1.17
SMAD4-212ENST00000591126 L1TD1Q5T7N2 865 aaKnown RBP7.72□□□□□ -1.17
SMAD4-212ENST00000591126 LDHCP07864 332 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 DDX46Q7L014 1031 aaKnown RBP7.71□□□□□ -1.17
SMAD4-212ENST00000591126 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 AGLP35573 1532 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 ABCC1P33527 1531 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 HDGFL1Q5TGJ6 251 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 RNF20Q5VTR2 975 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 HYPKQ9NX55 129 aa7.71□□□□□ -1.17
SMAD4-212ENST00000591126 UBTFL1P0CB47 393 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-212ENST00000591126 TRAF1Q13077 416 aa7.71□□□□□ -1.18
SMAD4-212ENST00000591126 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-212ENST00000591126 CAVIN4Q5BKX8 364 aa7.71□□□□□ -1.18
SMAD4-212ENST00000591126 TOMM22Q9NS69 142 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 SPTY2D1Q68D10 685 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-212ENST00000591126 YTHDC2Q9H6S0 1430 aaKnown RBP7.7□□□□□ -1.18
SMAD4-212ENST00000591126 PRKAR2BP31323 418 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 SART3Q15020 963 aaKnown RBP7.7□□□□□ -1.18
SMAD4-212ENST00000591126 GRIPAP1Q4V328 841 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 HOMEZQ8IX15 550 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 SETDB2Q96T68 719 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 NACAP1Q9BZK3 213 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 ADGRF5Q8IZF2 1346 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 GOLGA6L4A6NEF3 574 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 TPTE2Q6XPS3 522 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 DCAF5Q96JK2 942 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 SLC12A5Q9H2X9 1139 aa7.7□□□□□ -1.18
SMAD4-212ENST00000591126 CSPP1Q1MSJ5 1256 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 BTG4Q9NY30 223 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 APBA3O96018 575 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 SNRPA1P09661 255 aaKnown RBP7.69□□□□□ -1.18
SMAD4-212ENST00000591126 IFIT1P09914 478 aaKnown RBP7.69□□□□□ -1.18
SMAD4-212ENST00000591126 PTMSP20962 102 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 DPY19L2Q6NUT2 758 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 WDR63Q8IWG1 891 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 ZGPATQ8N5A5 531 aaKnown RBP7.69□□□□□ -1.18
SMAD4-212ENST00000591126 BABAM1Q9NWV8 329 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 FLT4P35916 1363 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 MPRIPQ6WCQ1 1025 aa7.69□□□□□ -1.18
SMAD4-212ENST00000591126 PAXIP1Q6ZW49 1069 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-212ENST00000591126 GCP02774 474 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 KRT27Q7Z3Y8 459 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 B4DLN1 442 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 HMOX1P09601 288 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 MRPL12P52815 198 aaKnown RBP7.68□□□□□ -1.18
SMAD4-212ENST00000591126 CHAF1AQ13111 956 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-212ENST00000591126 NFE2L2Q16236 605 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 AKAP4Q5JQC9 854 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 IP6K1Q92551 441 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 RCAN3Q9UKA8 241 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 DNMT1P26358 1616 aaKnown RBP7.68□□□□□ -1.18
SMAD4-212ENST00000591126 DHX37Q8IY37 1157 aaKnown RBP7.68□□□□□ -1.18
SMAD4-212ENST00000591126 BCL2L13Q9BXK5 485 aa7.68□□□□□ -1.18
SMAD4-212ENST00000591126 ZFYVE9O95405 1425 aa7.67□□□□□ -1.18
SMAD4-212ENST00000591126 XBP1P17861 261 aa7.67□□□□□ -1.18
SMAD4-212ENST00000591126 ATP6V1AP38606 617 aa7.67□□□□□ -1.18
SMAD4-212ENST00000591126 GSTO1P78417 241 aa7.67□□□□□ -1.18
SMAD4-212ENST00000591126 AIMP1Q12904 312 aaKnown RBP7.67□□□□□ -1.18
SMAD4-212ENST00000591126 UNC5CLQ8IV45 518 aa7.67□□□□□ -1.18
SMAD4-212ENST00000591126 OGFOD1Q8N543 542 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms