RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-229	ENST00000590704	TRPC5	Q9UL62	973 aa	Predicted RBP	28.91	■■■□□ 2.22
CIRBP-229	ENST00000590704	NSD2	O96028	1365 aa		28.9	■■■□□ 2.22
CIRBP-229	ENST00000590704	NPC1L1	Q9UHC9	1359 aa		28.9	■■■□□ 2.22
CIRBP-229	ENST00000590704	COL5A2	P05997	1499 aa	Predicted RBP	28.89	■■■□□ 2.22
CIRBP-229	ENST00000590704	ZBTB7C	A1YPR0	619 aa		28.88	■■■□□ 2.21
CIRBP-229	ENST00000590704	IP6K1	Q92551	441 aa		28.88	■■■□□ 2.21
CIRBP-229	ENST00000590704	GJD4	Q96KN9	370 aa	Predicted RBP	28.88	■■■□□ 2.21
CIRBP-229	ENST00000590704	GLI3	P10071	1580 aa		28.88	■■■□□ 2.21
CIRBP-229	ENST00000590704	PEAK1	Q9H792	1746 aa		28.87	■■■□□ 2.21
CIRBP-229	ENST00000590704	DDX10	Q13206	875 aa	Known RBP	28.86	■■■□□ 2.21
CIRBP-229	ENST00000590704	LARP1	Q6PKG0	1096 aa	Known RBP	28.86	■■■□□ 2.21
CIRBP-229	ENST00000590704	POLK	Q9UBT6	870 aa		28.86	■■■□□ 2.21
CIRBP-229	ENST00000590704	ABCC6	O95255	1503 aa		28.86	■■■□□ 2.21
CIRBP-229	ENST00000590704	EMILIN1	Q9Y6C2	1016 aa		28.85	■■■□□ 2.21
CIRBP-229	ENST00000590704	SPATA31A5	Q5VU36	1347 aa		28.85	■■■□□ 2.21
CIRBP-229	ENST00000590704	SPATA31A7	Q8IWB4	1347 aa		28.85	■■■□□ 2.21
CIRBP-229	ENST00000590704	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.85	■■■□□ 2.21
CIRBP-229	ENST00000590704	HOXC9	P31274	260 aa		28.85	■■■□□ 2.21
CIRBP-229	ENST00000590704	RBM6	P78332	1123 aa	Known RBP	28.85	■■■□□ 2.21
CIRBP-229	ENST00000590704	CC2D1B	Q5T0F9	858 aa	Known RBP	28.84	■■■□□ 2.21
CIRBP-229	ENST00000590704	STRN4	Q9NRL3	753 aa		28.84	■■■□□ 2.21
CIRBP-229	ENST00000590704	MAP2	P11137	1827 aa	Known RBP	28.84	■■■□□ 2.21
CIRBP-229	ENST00000590704	RXRB	P28702	533 aa		28.83	■■■□□ 2.21
CIRBP-229	ENST00000590704	ONECUT3	O60422	494 aa	Predicted RBP	28.81	■■■□□ 2.2
CIRBP-229	ENST00000590704	TNNT2	P45379	298 aa	Predicted RBP	28.81	■■■□□ 2.2
CIRBP-229	ENST00000590704	SPATA31A1	Q5TZJ5	1347 aa		28.8	■■■□□ 2.2
CIRBP-229	ENST00000590704	MORC1	Q86VD1	984 aa		28.8	■■■□□ 2.2
CIRBP-229	ENST00000590704	ERBB3	P21860	1342 aa		28.79	■■■□□ 2.2
CIRBP-229	ENST00000590704	WDR17	Q8IZU2	1322 aa		28.79	■■■□□ 2.2
CIRBP-229	ENST00000590704	EVA1C	P58658	441 aa		28.78	■■■□□ 2.2
CIRBP-229	ENST00000590704	HSP90AB2P	Q58FF8	381 aa		28.78	■■■□□ 2.2
CIRBP-229	ENST00000590704	BLM	P54132	1417 aa	Predicted RBP	28.77	■■■□□ 2.2
CIRBP-229	ENST00000590704	RTL1	A6NKG5	1358 aa		28.77	■■■□□ 2.2
CIRBP-229	ENST00000590704	KIF24	Q5T7B8	1368 aa		28.77	■■■□□ 2.2
CIRBP-229	ENST00000590704	AMPH	P49418	695 aa		28.76	■■■□□ 2.19
CIRBP-229	ENST00000590704	SMG6	Q86US8	1419 aa	Known RBP	28.76	■■■□□ 2.19
CIRBP-229	ENST00000590704	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.75	■■■□□ 2.19
CIRBP-229	ENST00000590704	ANKRD24	Q8TF21	1146 aa		28.75	■■■□□ 2.19
CIRBP-229	ENST00000590704	RGS12	O14924	1447 aa		28.75	■■■□□ 2.19
CIRBP-229	ENST00000590704	CRB1	P82279	1406 aa		28.74	■■■□□ 2.19
CIRBP-229	ENST00000590704	INSR	P06213	1382 aa		28.74	■■■□□ 2.19
CIRBP-229	ENST00000590704	FLT4	P35916	1363 aa		28.73	■■■□□ 2.19
CIRBP-229	ENST00000590704	CNGB1	Q14028	1251 aa	Predicted RBP	28.72	■■■□□ 2.19
CIRBP-229	ENST00000590704	CARD10	Q9BWT7	1032 aa		28.72	■■■□□ 2.19
CIRBP-229	ENST00000590704	CCDC9	Q9Y3X0	531 aa	Known RBP	28.72	■■■□□ 2.19
CIRBP-229	ENST00000590704	FAM98C	Q17RN3	349 aa	Known RBP	28.7	■■■□□ 2.18
CIRBP-229	ENST00000590704	RGPD2	P0DJD1	1756 aa		28.69	■■■□□ 2.18
CIRBP-229	ENST00000590704	BARGIN	Q6ZT62	677 aa		28.69	■■■□□ 2.18
CIRBP-229	ENST00000590704	TOM1L2	Q6ZVM7	507 aa		28.69	■■■□□ 2.18
CIRBP-229	ENST00000590704	LTV1	Q96GA3	475 aa	Predicted RBP	28.69	■■■□□ 2.18
CIRBP-229	ENST00000590704	USP35	Q9P2H5	1018 aa		28.69	■■■□□ 2.18
CIRBP-229	ENST00000590704	TCP11L2	Q8N4U5	519 aa		28.68	■■■□□ 2.18
CIRBP-229	ENST00000590704	PPM1G	O15355	546 aa	Predicted RBP	28.67	■■■□□ 2.18
CIRBP-229	ENST00000590704	THSD7A	Q9UPZ6	1657 aa		28.67	■■■□□ 2.18
CIRBP-229	ENST00000590704	MTHFS	P49914	203 aa		28.66	■■■□□ 2.18
CIRBP-229	ENST00000590704	NBPF6	Q5VWK0	638 aa		28.66	■■■□□ 2.18
CIRBP-229	ENST00000590704	SEPT12	Q8IYM1	358 aa		28.66	■■■□□ 2.18
CIRBP-229	ENST00000590704	NBPF4	Q96M43	638 aa		28.66	■■■□□ 2.18
CIRBP-229	ENST00000590704	THRAP3	Q9Y2W1	955 aa	Known RBP	28.66	■■■□□ 2.18
CIRBP-229	ENST00000590704	DISP2	A7MBM2	1401 aa		28.65	■■■□□ 2.18
CIRBP-229	ENST00000590704	PARD3	Q8TEW0	1356 aa		28.65	■■■□□ 2.18
CIRBP-229	ENST00000590704	CSB-PGBD3	P0DP91	1061 aa		28.65	■■■□□ 2.18
CIRBP-229	ENST00000590704	BRWD3	Q6RI45	1802 aa		28.63	■■■□□ 2.17
CIRBP-229	ENST00000590704	EIF4A2	Q14240	407 aa	Known RBP	28.63	■■■□□ 2.17
CIRBP-229	ENST00000590704	FAM208A	Q9UK61	1670 aa	Known RBP	28.63	■■■□□ 2.17
CIRBP-229	ENST00000590704	PPP2R1A	P30153	589 aa		28.62	■■■□□ 2.17
CIRBP-229	ENST00000590704	NLRP2	Q9NX02	1062 aa		28.62	■■■□□ 2.17
CIRBP-229	ENST00000590704	NCAPD2	Q15021	1401 aa		28.61	■■■□□ 2.17
CIRBP-229	ENST00000590704	EYA1	Q99502	592 aa		28.59	■■■□□ 2.17
CIRBP-229	ENST00000590704	IL13	P35225	146 aa		28.58	■■■□□ 2.17
CIRBP-229	ENST00000590704	COL3A1	P02461	1466 aa	Predicted RBP	28.57	■■■□□ 2.16
CIRBP-229	ENST00000590704	EP400	Q96L91	3159 aa		28.57	■■■□□ 2.16
CIRBP-229	ENST00000590704	WNK3	Q9BYP7	1800 aa		28.57	■■■□□ 2.16
CIRBP-229	ENST00000590704	USHBP1	Q8N6Y0	703 aa		28.57	■■■□□ 2.16
CIRBP-229	ENST00000590704	PARP4	Q9UKK3	1724 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-229	ENST00000590704	RGPD1	P0DJD0	1748 aa		28.51	■■■□□ 2.16
CIRBP-229	ENST00000590704	IGSF1	Q8N6C5	1336 aa		28.51	■■■□□ 2.16
CIRBP-229	ENST00000590704	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.51	■■■□□ 2.15
CIRBP-229	ENST00000590704	MEGF6	O75095	1541 aa		28.5	■■■□□ 2.15
CIRBP-229	ENST00000590704	RALBP1	Q15311	655 aa		28.5	■■■□□ 2.15
CIRBP-229	ENST00000590704	LRRC37A3	O60309	1634 aa		28.5	■■■□□ 2.15
CIRBP-229	ENST00000590704	IL2RB	P14784	551 aa		28.49	■■■□□ 2.15
CIRBP-229	ENST00000590704	FAM182B	Q5T319	152 aa		28.49	■■■□□ 2.15
CIRBP-229	ENST00000590704	KRT27	Q7Z3Y8	459 aa		28.49	■■■□□ 2.15
CIRBP-229	ENST00000590704	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.49	■■■□□ 2.15
CIRBP-229	ENST00000590704		A0A0G2JS52	829 aa		28.45	■■■□□ 2.14
CIRBP-229	ENST00000590704	MYT1	Q01538	1121 aa		28.45	■■■□□ 2.14
CIRBP-229	ENST00000590704	AEBP1	Q8IUX7	1158 aa		28.45	■■■□□ 2.14
CIRBP-229	ENST00000590704	MARCH10	Q8NA82	808 aa	Predicted RBP	28.45	■■■□□ 2.14
CIRBP-229	ENST00000590704	DDB1	Q16531	1140 aa		28.44	■■■□□ 2.14
CIRBP-229	ENST00000590704	OVOS2	A0A0G2JMS6	1433 aa		28.43	■■■□□ 2.14
CIRBP-229	ENST00000590704	DIAPH1	O60610	1272 aa	Known RBP	28.43	■■■□□ 2.14
CIRBP-229	ENST00000590704	KDR	P35968	1356 aa		28.42	■■■□□ 2.14
CIRBP-229	ENST00000590704	SHANK3	Q9BYB0	1731 aa		28.42	■■■□□ 2.14
CIRBP-229	ENST00000590704	TNS2	Q63HR2	1409 aa		28.42	■■■□□ 2.14
CIRBP-229	ENST00000590704	EXOC5	O00471	708 aa		28.41	■■■□□ 2.14
CIRBP-229	ENST00000590704	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.39	■■■□□ 2.14
CIRBP-229	ENST00000590704	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.39	■■■□□ 2.13
CIRBP-229	ENST00000590704	PDE3B	Q13370	1112 aa		28.38	■■■□□ 2.13
CIRBP-229	ENST00000590704	SULT6B1	Q6IMI4	303 aa		28.38	■■■□□ 2.13

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