RNA–Protein interactions for RNA: ENST00000590435.5

SNHG16-207, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 5 BASIC

Gene SNHG16, Length 1,947 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-207ENST00000590435 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
SNHG16-207ENST00000590435 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
SNHG16-207ENST00000590435 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
SNHG16-207ENST00000590435 SLIT3O75094 1523 aa12.97□□□□□ -0.33
SNHG16-207ENST00000590435 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.33
SNHG16-207ENST00000590435 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
SNHG16-207ENST00000590435 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.33
SNHG16-207ENST00000590435 MAP2P11137 1827 aaKnown RBP12.96□□□□□ -0.34
SNHG16-207ENST00000590435 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.34
SNHG16-207ENST00000590435 PEAK1Q9H792 1746 aa12.95□□□□□ -0.34
SNHG16-207ENST00000590435 INSRP06213 1382 aa12.95□□□□□ -0.34
SNHG16-207ENST00000590435 POTEHQ6S545 545 aa12.95□□□□□ -0.34
SNHG16-207ENST00000590435 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
SNHG16-207ENST00000590435 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
SNHG16-207ENST00000590435 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
SNHG16-207ENST00000590435 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
SNHG16-207ENST00000590435 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
SNHG16-207ENST00000590435 FLT4P35916 1363 aa12.93□□□□□ -0.34
SNHG16-207ENST00000590435 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
SNHG16-207ENST00000590435 HOXC9P31274 260 aa12.93□□□□□ -0.34
SNHG16-207ENST00000590435 AMPHP49418 695 aa12.93□□□□□ -0.34
SNHG16-207ENST00000590435 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
SNHG16-207ENST00000590435 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
SNHG16-207ENST00000590435 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
SNHG16-207ENST00000590435 IL13P35225 146 aa12.92□□□□□ -0.34
SNHG16-207ENST00000590435 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.345e-28■□□□□ 9.6
SNHG16-207ENST00000590435 CRYBG1Q9Y4K1 1723 aa12.92□□□□□ -0.34
SNHG16-207ENST00000590435 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
SNHG16-207ENST00000590435 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
SNHG16-207ENST00000590435 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
SNHG16-207ENST00000590435 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
SNHG16-207ENST00000590435 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
SNHG16-207ENST00000590435 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
SNHG16-207ENST00000590435 RTL1A6NKG5 1358 aa12.9□□□□□ -0.34
SNHG16-207ENST00000590435 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
SNHG16-207ENST00000590435 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
SNHG16-207ENST00000590435 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.343e-26■□□□□ 10
SNHG16-207ENST00000590435 IP6K1Q92551 441 aa12.9□□□□□ -0.34
SNHG16-207ENST00000590435 CHRNA2Q15822 529 aa12.9□□□□□ -0.35
SNHG16-207ENST00000590435 LTN1O94822 1766 aa12.89□□□□□ -0.35
SNHG16-207ENST00000590435 CPDO75976 1380 aa12.89□□□□□ -0.35
SNHG16-207ENST00000590435 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
SNHG16-207ENST00000590435 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
SNHG16-207ENST00000590435 HSPA1LP34931 641 aa12.88□□□□□ -0.35
SNHG16-207ENST00000590435 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
SNHG16-207ENST00000590435 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNHG16-207ENST00000590435 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
SNHG16-207ENST00000590435 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
SNHG16-207ENST00000590435 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
SNHG16-207ENST00000590435 HMOX1P09601 288 aa12.87□□□□□ -0.35
SNHG16-207ENST00000590435 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
SNHG16-207ENST00000590435 PRDM11Q9NQV5 511 aa12.87□□□□□ -0.35
SNHG16-207ENST00000590435 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
SNHG16-207ENST00000590435 EYA1Q99502 592 aa12.86□□□□□ -0.35
SNHG16-207ENST00000590435 ERBB3P21860 1342 aa12.86□□□□□ -0.35
SNHG16-207ENST00000590435 FAM83GA6ND36 823 aa12.85□□□□□ -0.35
SNHG16-207ENST00000590435 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
SNHG16-207ENST00000590435 SULT6B1Q6IMI4 303 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 JCADQ9P266 1359 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 COL18A1P39060 1754 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
SNHG16-207ENST00000590435 RGPD1P0DJD0 1748 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 NUTM2BA6NNL0 878 aaPredicted RBP12.83□□□□□ -0.36
SNHG16-207ENST00000590435 NUTM2EB1AL46 878 aaPredicted RBP12.83□□□□□ -0.36
SNHG16-207ENST00000590435 APAF1O14727 1248 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 FCHSD2O94868 740 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 NUTM2AQ8IVF1 878 aaPredicted RBP12.83□□□□□ -0.36
SNHG16-207ENST00000590435 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
SNHG16-207ENST00000590435 KDRP35968 1356 aa12.82□□□□□ -0.36
SNHG16-207ENST00000590435 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
SNHG16-207ENST00000590435 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
SNHG16-207ENST00000590435 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
SNHG16-207ENST00000590435 ABCC6O95255 1503 aa12.81□□□□□ -0.36
SNHG16-207ENST00000590435 LMO7Q8WWI1 1683 aa12.81□□□□□ -0.36
SNHG16-207ENST00000590435 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
SNHG16-207ENST00000590435 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
SNHG16-207ENST00000590435 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
SNHG16-207ENST00000590435 RGPD5Q99666 1765 aa12.8□□□□□ -0.36
SNHG16-207ENST00000590435 ZBED9Q6R2W3 1325 aa12.8□□□□□ -0.36
SNHG16-207ENST00000590435 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
SNHG16-207ENST00000590435 LRP6O75581 1613 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 CSB-PGBD3P0DP91 1061 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 NLRP2Q9NX02 1062 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 WDR17Q8IZU2 1322 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 MAPK8IP3Q9UPT6 1336 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
SNHG16-207ENST00000590435 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
SNHG16-207ENST00000590435 SPATA31A6Q5VVP1 1343 aa12.77□□□□□ -0.36
SNHG16-207ENST00000590435 EP400Q96L91 3159 aa12.77□□□□□ -0.37
SNHG16-207ENST00000590435 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms