RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 BRWD3Q6RI45 1802 aa23.13■■□□□ 1.29
AC040963.1-202ENST00000589729 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
AC040963.1-202ENST00000589729 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
AC040963.1-202ENST00000589729 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
AC040963.1-202ENST00000589729 RBM6P78332 1123 aaKnown RBP23.11■■□□□ 1.29
AC040963.1-202ENST00000589729 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
AC040963.1-202ENST00000589729 VPS72Q15906 364 aa23.11■■□□□ 1.29
AC040963.1-202ENST00000589729 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
AC040963.1-202ENST00000589729 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
AC040963.1-202ENST00000589729 ABCC6O95255 1503 aa23.1■■□□□ 1.29
AC040963.1-202ENST00000589729 GJD4Q96KN9 370 aaPredicted RBP23.1■■□□□ 1.29
AC040963.1-202ENST00000589729 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
AC040963.1-202ENST00000589729 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
AC040963.1-202ENST00000589729 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
AC040963.1-202ENST00000589729 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
AC040963.1-202ENST00000589729 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
AC040963.1-202ENST00000589729 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
AC040963.1-202ENST00000589729 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
AC040963.1-202ENST00000589729 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
AC040963.1-202ENST00000589729 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
AC040963.1-202ENST00000589729 EVA1CP58658 441 aa23.05■■□□□ 1.28
AC040963.1-202ENST00000589729 FAM98CQ17RN3 349 aaKnown RBP23.04■■□□□ 1.28
AC040963.1-202ENST00000589729 AMER1Q5JTC6 1135 aaPredicted RBP23.04■■□□□ 1.28
AC040963.1-202ENST00000589729 SPATA31A1Q5TZJ5 1347 aa23.04■■□□□ 1.28
AC040963.1-202ENST00000589729 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
AC040963.1-202ENST00000589729 EMILIN1Q9Y6C2 1016 aa23.03■■□□□ 1.28
AC040963.1-202ENST00000589729 CRB1P82279 1406 aa23.02■■□□□ 1.28
AC040963.1-202ENST00000589729 LTV1Q96GA3 475 aaPredicted RBP23.02■■□□□ 1.28
AC040963.1-202ENST00000589729 PER1O15534 1290 aaPredicted RBP23.01■■□□□ 1.27
AC040963.1-202ENST00000589729 NSD2O96028 1365 aa23.01■■□□□ 1.27
AC040963.1-202ENST00000589729 LRRC37A3O60309 1634 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
AC040963.1-202ENST00000589729 A0A0G2JS52 829 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 HOXC9P31274 260 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 AMPHP49418 695 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 MYT1Q01538 1121 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 CC2D1BQ5T0F9 858 aaKnown RBP23■■□□□ 1.27
AC040963.1-202ENST00000589729 ERBB3P21860 1342 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
AC040963.1-202ENST00000589729 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
AC040963.1-202ENST00000589729 CSB-PGBD3P0DP91 1061 aa22.99■■□□□ 1.27
AC040963.1-202ENST00000589729 ANKRD24Q8TF21 1146 aa22.99■■□□□ 1.27
AC040963.1-202ENST00000589729 RTL1A6NKG5 1358 aa22.99■■□□□ 1.27
AC040963.1-202ENST00000589729 TOM1L2Q6ZVM7 507 aa22.98■■□□□ 1.27
AC040963.1-202ENST00000589729 IP6K1Q92551 441 aa22.98■■□□□ 1.27
AC040963.1-202ENST00000589729 PPM1GO15355 546 aaPredicted RBP22.97■■□□□ 1.27
AC040963.1-202ENST00000589729 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
AC040963.1-202ENST00000589729 PARP4Q9UKK3 1724 aaKnown RBP22.96■■□□□ 1.27
AC040963.1-202ENST00000589729 FLT4P35916 1363 aa22.95■■□□□ 1.26
AC040963.1-202ENST00000589729 HSP90AB2PQ58FF8 381 aa22.95■■□□□ 1.26
AC040963.1-202ENST00000589729 MORC1Q86VD1 984 aa22.95■■□□□ 1.26
AC040963.1-202ENST00000589729 EP400Q96L91 3159 aa22.95■■□□□ 1.26
AC040963.1-202ENST00000589729 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
AC040963.1-202ENST00000589729 SMG6Q86US8 1419 aaKnown RBP22.93■■□□□ 1.26
AC040963.1-202ENST00000589729 POLKQ9UBT6 870 aa22.93■■□□□ 1.26
AC040963.1-202ENST00000589729 NLRP2Q9NX02 1062 aa22.92■■□□□ 1.26
AC040963.1-202ENST00000589729 DISP2A7MBM2 1401 aa22.91■■□□□ 1.26
AC040963.1-202ENST00000589729 FAM182BQ5T319 152 aa22.91■■□□□ 1.26
AC040963.1-202ENST00000589729 INSRP06213 1382 aa22.9■■□□□ 1.26
AC040963.1-202ENST00000589729 ONECUT3O60422 494 aaPredicted RBP22.9■■□□□ 1.26
AC040963.1-202ENST00000589729 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
AC040963.1-202ENST00000589729 USHBP1Q8N6Y0 703 aa22.9■■□□□ 1.26
AC040963.1-202ENST00000589729 SOCS7O14512 581 aa22.89■■□□□ 1.25
AC040963.1-202ENST00000589729 CARD10Q9BWT7 1032 aa22.89■■□□□ 1.25
AC040963.1-202ENST00000589729 BARGINQ6ZT62 677 aa22.88■■□□□ 1.25
AC040963.1-202ENST00000589729 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
AC040963.1-202ENST00000589729 NPC1L1Q9UHC9 1359 aa22.88■■□□□ 1.25
AC040963.1-202ENST00000589729 MEGF6O75095 1541 aa22.87■■□□□ 1.25
AC040963.1-202ENST00000589729 KIF24Q5T7B8 1368 aa22.86■■□□□ 1.25
AC040963.1-202ENST00000589729 KRT27Q7Z3Y8 459 aa22.85■■□□□ 1.25
AC040963.1-202ENST00000589729 NBPF6Q5VWK0 638 aa22.84■■□□□ 1.25
AC040963.1-202ENST00000589729 NBPF4Q96M43 638 aa22.84■■□□□ 1.25
AC040963.1-202ENST00000589729 THRAP3Q9Y2W1 955 aaKnown RBP22.84■■□□□ 1.25
AC040963.1-202ENST00000589729 TNS2Q63HR2 1409 aa22.82■■□□□ 1.24
AC040963.1-202ENST00000589729 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
AC040963.1-202ENST00000589729 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
AC040963.1-202ENST00000589729 COL3A1P02461 1466 aaPredicted RBP22.8■■□□□ 1.24
AC040963.1-202ENST00000589729 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
AC040963.1-202ENST00000589729 MTHFSP49914 203 aa22.79■■□□□ 1.24
AC040963.1-202ENST00000589729 NCAPD2Q15021 1401 aa22.78■■□□□ 1.24
AC040963.1-202ENST00000589729 UPF1Q92900 1129 aaKnown RBP eCLIP22.78■■□□□ 1.24
AC040963.1-202ENST00000589729 SBF2Q86WG5 1849 aa22.78■■□□□ 1.24
AC040963.1-202ENST00000589729 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
AC040963.1-202ENST00000589729 IL2RBP14784 551 aa22.77■■□□□ 1.24
AC040963.1-202ENST00000589729 PKD1L3Q7Z443 1732 aa22.77■■□□□ 1.23
AC040963.1-202ENST00000589729 DDB1Q16531 1140 aa22.76■■□□□ 1.23
AC040963.1-202ENST00000589729 EYA1Q99502 592 aa22.76■■□□□ 1.23
AC040963.1-202ENST00000589729 PARD3Q8TEW0 1356 aa22.76■■□□□ 1.23
AC040963.1-202ENST00000589729 OVOS2A0A0G2JMS6 1433 aa22.75■■□□□ 1.23
AC040963.1-202ENST00000589729 PDE3BQ13370 1112 aa22.75■■□□□ 1.23
AC040963.1-202ENST00000589729 MARCH10Q8NA82 808 aaPredicted RBP22.74■■□□□ 1.23
AC040963.1-202ENST00000589729 PPP2R1AP30153 589 aa22.73■■□□□ 1.23
AC040963.1-202ENST00000589729 DOT1LQ8TEK3 1739 aa22.73■■□□□ 1.23
AC040963.1-202ENST00000589729 AEBP1Q8IUX7 1158 aa22.72■■□□□ 1.23
AC040963.1-202ENST00000589729 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
AC040963.1-202ENST00000589729 IGSF1Q8N6C5 1336 aa22.71■■□□□ 1.23
AC040963.1-202ENST00000589729 IL13P35225 146 aa22.7■■□□□ 1.22
AC040963.1-202ENST00000589729 TOGARAM1Q9Y4F4 1720 aa22.68■■□□□ 1.22
AC040963.1-202ENST00000589729 EXOC5O00471 708 aa22.68■■□□□ 1.22
AC040963.1-202ENST00000589729 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms