RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 SPATA31A7Q8IWB4 1347 aa23.52■■□□□ 1.36
GHDC-208ENST00000588352 ZBTB7CA1YPR0 619 aa23.49■■□□□ 1.35
GHDC-208ENST00000588352 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
GHDC-208ENST00000588352 RTL1A6NKG5 1358 aa23.49■■□□□ 1.35
GHDC-208ENST00000588352 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
GHDC-208ENST00000588352 STRN4Q9NRL3 753 aa23.48■■□□□ 1.35
GHDC-208ENST00000588352 SPATA31A1Q5TZJ5 1347 aa23.48■■□□□ 1.35
GHDC-208ENST00000588352 CRB1P82279 1406 aa23.48■■□□□ 1.35
GHDC-208ENST00000588352 SOCS7O14512 581 aa23.46■■□□□ 1.35
GHDC-208ENST00000588352 EVA1CP58658 441 aa23.46■■□□□ 1.35
GHDC-208ENST00000588352 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
GHDC-208ENST00000588352 WDR17Q8IZU2 1322 aa23.46■■□□□ 1.35
GHDC-208ENST00000588352 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
GHDC-208ENST00000588352 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
GHDC-208ENST00000588352 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
GHDC-208ENST00000588352 LARP1Q6PKG0 1096 aaKnown RBP23.45■■□□□ 1.34
GHDC-208ENST00000588352 ERBB3P21860 1342 aa23.44■■□□□ 1.34
GHDC-208ENST00000588352 LTN1O94822 1766 aa23.44■■□□□ 1.34
GHDC-208ENST00000588352 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
GHDC-208ENST00000588352 THSD7AQ9UPZ6 1657 aa23.44■■□□□ 1.34
GHDC-208ENST00000588352 KNSTRNQ9Y448 316 aa23.43■■□□□ 1.34
GHDC-208ENST00000588352 IP6K1Q92551 441 aa23.42■■□□□ 1.34
GHDC-208ENST00000588352 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
GHDC-208ENST00000588352 BARGINQ6ZT62 677 aa23.41■■□□□ 1.34
GHDC-208ENST00000588352 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
GHDC-208ENST00000588352 AMER1Q5JTC6 1135 aaPredicted RBP23.4■■□□□ 1.34
GHDC-208ENST00000588352 FLT4P35916 1363 aa23.4■■□□□ 1.34
GHDC-208ENST00000588352 NPC1L1Q9UHC9 1359 aa23.4■■□□□ 1.34
GHDC-208ENST00000588352 PER1O15534 1290 aaPredicted RBP23.39■■□□□ 1.33
GHDC-208ENST00000588352 HOXC9P31274 260 aa23.39■■□□□ 1.33
GHDC-208ENST00000588352 SEPT12Q8IYM1 358 aa23.39■■□□□ 1.33
GHDC-208ENST00000588352 TCP11L2Q8N4U5 519 aa23.39■■□□□ 1.33
GHDC-208ENST00000588352 RRS1Q15050 365 aaKnown RBP23.38■■□□□ 1.33
GHDC-208ENST00000588352 SMG6Q86US8 1419 aaKnown RBP23.37■■□□□ 1.33
GHDC-208ENST00000588352 FBLN1P23142 703 aa23.37■■□□□ 1.33
GHDC-208ENST00000588352 AMPHP49418 695 aa23.37■■□□□ 1.33
GHDC-208ENST00000588352 TOM1L2Q6ZVM7 507 aa23.37■■□□□ 1.33
GHDC-208ENST00000588352 CARD10Q9BWT7 1032 aa23.37■■□□□ 1.33
GHDC-208ENST00000588352 CSB-PGBD3P0DP91 1061 aa23.36■■□□□ 1.33
GHDC-208ENST00000588352 ANKRD24Q8TF21 1146 aa23.36■■□□□ 1.33
GHDC-208ENST00000588352 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
GHDC-208ENST00000588352 PEAK1Q9H792 1746 aa23.35■■□□□ 1.33
GHDC-208ENST00000588352 INSRP06213 1382 aa23.35■■□□□ 1.33
GHDC-208ENST00000588352 DISP2A7MBM2 1401 aa23.34■■□□□ 1.33
GHDC-208ENST00000588352 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
GHDC-208ENST00000588352 A0A0G2JS52 829 aa23.33■■□□□ 1.33
GHDC-208ENST00000588352 MYT1Q01538 1121 aa23.33■■□□□ 1.33
GHDC-208ENST00000588352 EMILIN1Q9Y6C2 1016 aa23.32■■□□□ 1.32
GHDC-208ENST00000588352 MORC1Q86VD1 984 aa23.31■■□□□ 1.32
GHDC-208ENST00000588352 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
GHDC-208ENST00000588352 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
GHDC-208ENST00000588352 PARP4Q9UKK3 1724 aaKnown RBP23.3■■□□□ 1.32
GHDC-208ENST00000588352 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
GHDC-208ENST00000588352 WNK3Q9BYP7 1800 aa23.29■■□□□ 1.32
GHDC-208ENST00000588352 KRT27Q7Z3Y8 459 aa23.29■■□□□ 1.32
GHDC-208ENST00000588352 NLRP2Q9NX02 1062 aa23.28■■□□□ 1.32
GHDC-208ENST00000588352 LRRC37A3O60309 1634 aa23.28■■□□□ 1.32
GHDC-208ENST00000588352 HSP90AB2PQ58FF8 381 aa23.27■■□□□ 1.32
GHDC-208ENST00000588352 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
GHDC-208ENST00000588352 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
GHDC-208ENST00000588352 LTV1Q96GA3 475 aaPredicted RBP23.25■■□□□ 1.31
GHDC-208ENST00000588352 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
GHDC-208ENST00000588352 BRWD3Q6RI45 1802 aa23.24■■□□□ 1.31
GHDC-208ENST00000588352 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
GHDC-208ENST00000588352 UPF1Q92900 1129 aaKnown RBP eCLIP23.23■■□□□ 1.31
GHDC-208ENST00000588352 PPM1GO15355 546 aaPredicted RBP23.22■■□□□ 1.31
GHDC-208ENST00000588352 IL2RBP14784 551 aa23.21■■□□□ 1.31
GHDC-208ENST00000588352 PDE3BQ13370 1112 aa23.2■■□□□ 1.3
GHDC-208ENST00000588352 DDB1Q16531 1140 aa23.2■■□□□ 1.3
GHDC-208ENST00000588352 OVOS2A0A0G2JMS6 1433 aa23.19■■□□□ 1.3
GHDC-208ENST00000588352 NBPF6Q5VWK0 638 aa23.18■■□□□ 1.3
GHDC-208ENST00000588352 NBPF4Q96M43 638 aa23.18■■□□□ 1.3
GHDC-208ENST00000588352 BCL9O00512 1426 aa23.17■■□□□ 1.3
GHDC-208ENST00000588352 MEGF6O75095 1541 aa23.17■■□□□ 1.3
GHDC-208ENST00000588352 EIF4A2Q14240 407 aaKnown RBP23.16■■□□□ 1.3
GHDC-208ENST00000588352 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
GHDC-208ENST00000588352 PLEKHG2Q9H7P9 1386 aa23.15■■□□□ 1.3
GHDC-208ENST00000588352 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
GHDC-208ENST00000588352 EP400Q96L91 3159 aa23.15■■□□□ 1.3
GHDC-208ENST00000588352 FAM196AQ6ZSG2 479 aa23.15■■□□□ 1.3
GHDC-208ENST00000588352 IGSF1Q8N6C5 1336 aa23.13■■□□□ 1.29
GHDC-208ENST00000588352 EXOC5O00471 708 aa23.13■■□□□ 1.29
GHDC-208ENST00000588352 MTHFSP49914 203 aa23.12■■□□□ 1.29
GHDC-208ENST00000588352 USHBP1Q8N6Y0 703 aa23.12■■□□□ 1.29
GHDC-208ENST00000588352 PARD3Q8TEW0 1356 aa23.12■■□□□ 1.29
GHDC-208ENST00000588352 FAM182BQ5T319 152 aa23.11■■□□□ 1.29
GHDC-208ENST00000588352 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
GHDC-208ENST00000588352 EYA1Q99502 592 aa23.11■■□□□ 1.29
GHDC-208ENST00000588352 COL3A1P02461 1466 aaPredicted RBP23.11■■□□□ 1.29
GHDC-208ENST00000588352 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
GHDC-208ENST00000588352 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
GHDC-208ENST00000588352 RGPD2P0DJD1 1756 aa23.09■■□□□ 1.29
GHDC-208ENST00000588352 RGPD1P0DJD0 1748 aa23.08■■□□□ 1.28
GHDC-208ENST00000588352 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
GHDC-208ENST00000588352 IL13P35225 146 aa23.07■■□□□ 1.28
GHDC-208ENST00000588352 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
GHDC-208ENST00000588352 KDRP35968 1356 aa23.06■■□□□ 1.28
GHDC-208ENST00000588352 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
GHDC-208ENST00000588352 PPP2R1AP30153 589 aa23.05■■□□□ 1.28
GHDC-208ENST00000588352 SF3B2Q13435 895 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms