RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 TTC21BQ7Z4L5 1316 aa29.76■■■□□ 2.35
R3HDM4-203ENST00000587975 IFT57Q9NWB7 429 aa29.75■■■□□ 2.35
R3HDM4-203ENST00000587975 USP6P35125 1406 aa29.75■■■□□ 2.35
R3HDM4-203ENST00000587975 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
R3HDM4-203ENST00000587975 TRIM27P14373 513 aa29.75■■■□□ 2.35
R3HDM4-203ENST00000587975 NALCNQ8IZF0 1738 aa29.74■■■□□ 2.35
R3HDM4-203ENST00000587975 FBLN1P23142 703 aa29.74■■■□□ 2.35
R3HDM4-203ENST00000587975 NCKAP5LQ9HCH0 1330 aa29.74■■■□□ 2.35
R3HDM4-203ENST00000587975 GNAI1P63096 354 aa29.73■■■□□ 2.35
R3HDM4-203ENST00000587975 ZRANB1Q9UGI0 708 aa29.73■■■□□ 2.35
R3HDM4-203ENST00000587975 PHACTR3Q96KR7 559 aa29.72■■■□□ 2.35
R3HDM4-203ENST00000587975 USP31Q70CQ4 1352 aa29.72■■■□□ 2.35
R3HDM4-203ENST00000587975 ACEP12821 1306 aa29.71■■■□□ 2.35
R3HDM4-203ENST00000587975 SSH2Q76I76 1423 aa29.71■■■□□ 2.35
R3HDM4-203ENST00000587975 ZNF853P0CG23 659 aa29.71■■■□□ 2.35
R3HDM4-203ENST00000587975 HDAC1Q13547 482 aaPredicted RBP29.71■■■□□ 2.35
R3HDM4-203ENST00000587975 THEMISQ8N1K5 641 aaPredicted RBP29.71■■■□□ 2.35
R3HDM4-203ENST00000587975 HMOX1P09601 288 aa29.7■■■□□ 2.35
R3HDM4-203ENST00000587975 NOB1Q9ULX3 412 aaKnown RBP29.69■■■□□ 2.34
R3HDM4-203ENST00000587975 TTC21AQ8NDW8 1320 aa29.69■■■□□ 2.34
R3HDM4-203ENST00000587975 CEBPAP49715 358 aaPredicted RBP29.67■■■□□ 2.34
R3HDM4-203ENST00000587975 RIMS1Q86UR5 1692 aaKnown RBP29.67■■■□□ 2.34
R3HDM4-203ENST00000587975 ARHGAP45Q92619 1136 aa29.67■■■□□ 2.34
R3HDM4-203ENST00000587975 RRS1Q15050 365 aaKnown RBP29.66■■■□□ 2.34
R3HDM4-203ENST00000587975 AMOTL2Q9Y2J4 779 aa29.66■■■□□ 2.34
R3HDM4-203ENST00000587975 PIK3R4Q99570 1358 aa29.65■■■□□ 2.34
R3HDM4-203ENST00000587975 CHMP4BQ9H444 224 aaKnown RBP29.65■■■□□ 2.34
R3HDM4-203ENST00000587975 XRN1Q8IZH2 1706 aaKnown RBP29.65■■■□□ 2.34
R3HDM4-203ENST00000587975 CFAP44Q96MT7 982 aa29.64■■■□□ 2.34
R3HDM4-203ENST00000587975 SLC26A8Q96RN1 970 aa29.64■■■□□ 2.34
R3HDM4-203ENST00000587975 PDZRN3Q9UPQ7 1066 aa29.64■■■□□ 2.34
R3HDM4-203ENST00000587975 VAMP4O75379 141 aa29.62■■■□□ 2.33
R3HDM4-203ENST00000587975 ITPRIPQ8IWB1 547 aa29.62■■■□□ 2.33
R3HDM4-203ENST00000587975 DLG5Q8TDM6 1919 aa29.62■■■□□ 2.33
R3HDM4-203ENST00000587975 ANKARQ7Z5J8 1434 aa29.62■■■□□ 2.33
R3HDM4-203ENST00000587975 ZBTB40Q9NUA8 1239 aa29.61■■■□□ 2.33
R3HDM4-203ENST00000587975 RGPD1P0DJD0 1748 aa29.6■■■□□ 2.33
R3HDM4-203ENST00000587975 TMEM57Q8N5G2 664 aa29.6■■■□□ 2.33
R3HDM4-203ENST00000587975 EIF4A2Q14240 407 aaKnown RBP29.59■■■□□ 2.33
R3HDM4-203ENST00000587975 MRPL50Q8N5N7 158 aaKnown RBP29.58■■■□□ 2.33
R3HDM4-203ENST00000587975 MBIPQ9NS73 344 aa29.57■■■□□ 2.32
R3HDM4-203ENST00000587975 USP35Q9P2H5 1018 aa29.57■■■□□ 2.32
R3HDM4-203ENST00000587975 HAP1P54257 671 aaPredicted RBP29.56■■■□□ 2.32
R3HDM4-203ENST00000587975 SMC5Q8IY18 1101 aa29.56■■■□□ 2.32
R3HDM4-203ENST00000587975 LAS1LQ9Y4W2 734 aaKnown RBP29.56■■■□□ 2.32
R3HDM4-203ENST00000587975 PEAK1Q9H792 1746 aa29.55■■■□□ 2.32
R3HDM4-203ENST00000587975 ARHGEF10O15013 1369 aa29.55■■■□□ 2.32
R3HDM4-203ENST00000587975 DAXXQ9UER7 740 aaPredicted RBP29.53■■■□□ 2.32
R3HDM4-203ENST00000587975 RTL5Q5HYW3 569 aaPredicted RBP29.52■■■□□ 2.32
R3HDM4-203ENST00000587975 THUMPD2Q9BTF0 503 aaKnown RBP29.52■■■□□ 2.32
R3HDM4-203ENST00000587975 USP19O94966 1318 aa29.52■■■□□ 2.32
R3HDM4-203ENST00000587975 CEP170BQ9Y4F5 1589 aaPredicted RBP29.52■■■□□ 2.32
R3HDM4-203ENST00000587975 SBNO1A3KN83 1393 aa29.51■■■□□ 2.32
R3HDM4-203ENST00000587975 KIF24Q5T7B8 1368 aa29.51■■■□□ 2.32
R3HDM4-203ENST00000587975 NBR1Q14596 966 aa29.51■■■□□ 2.31
R3HDM4-203ENST00000587975 TWISTNBQ3B726 338 aaPredicted RBP29.51■■■□□ 2.31
R3HDM4-203ENST00000587975 SULT6B1Q6IMI4 303 aa29.51■■■□□ 2.31
R3HDM4-203ENST00000587975 USP54Q70EL1 1684 aa29.5■■■□□ 2.31
R3HDM4-203ENST00000587975 ABCC4O15439 1325 aa29.5■■■□□ 2.31
R3HDM4-203ENST00000587975 FLT4P35916 1363 aa29.49■■■□□ 2.31
R3HDM4-203ENST00000587975 FMN2Q9NZ56 1722 aa29.48■■■□□ 2.31
R3HDM4-203ENST00000587975 TSPYL6Q8N831 410 aa29.48■■■□□ 2.31
R3HDM4-203ENST00000587975 API5Q9BZZ5 524 aaKnown RBP29.48■■■□□ 2.31
R3HDM4-203ENST00000587975 KIAA0232Q92628 1395 aa29.47■■■□□ 2.31
R3HDM4-203ENST00000587975 NGDNQ8NEJ9 315 aaKnown RBP29.46■■■□□ 2.31
R3HDM4-203ENST00000587975 UPF2Q9HAU5 1272 aaKnown RBP29.46■■■□□ 2.31
R3HDM4-203ENST00000587975 KDRP35968 1356 aa29.45■■■□□ 2.31
R3HDM4-203ENST00000587975 NUTM2FA1L443 756 aa29.45■■■□□ 2.31
R3HDM4-203ENST00000587975 ZBTB7BO15156 539 aaPredicted RBP29.45■■■□□ 2.31
R3HDM4-203ENST00000587975 AEBP1Q8IUX7 1158 aa29.45■■■□□ 2.31
R3HDM4-203ENST00000587975 MAP3K19Q56UN5 1328 aa29.45■■■□□ 2.3
R3HDM4-203ENST00000587975 HSP90AB2PQ58FF8 381 aa29.44■■■□□ 2.3
R3HDM4-203ENST00000587975 PIK3C2AO00443 1686 aa29.44■■■□□ 2.3
R3HDM4-203ENST00000587975 CHL1O00533 1208 aa29.44■■■□□ 2.3
R3HDM4-203ENST00000587975 C8orf58Q8NAV2 365 aa29.43■■■□□ 2.3
R3HDM4-203ENST00000587975 FAM83GA6ND36 823 aa29.41■■■□□ 2.3
R3HDM4-203ENST00000587975 RGPD8O14715 1765 aaPredicted RBP29.41■■■□□ 2.3
R3HDM4-203ENST00000587975 NUCB1Q02818 461 aa29.41■■■□□ 2.3
R3HDM4-203ENST00000587975 ZNF142P52746 1687 aaPredicted RBP29.41■■■□□ 2.3
R3HDM4-203ENST00000587975 GCC1Q96CN9 775 aa29.4■■■□□ 2.3
R3HDM4-203ENST00000587975 SEC24BO95487 1268 aa29.39■■■□□ 2.3
R3HDM4-203ENST00000587975 IGSF1Q8N6C5 1336 aa29.38■■■□□ 2.29
R3HDM4-203ENST00000587975 KCNA6P17658 529 aa29.38■■■□□ 2.29
R3HDM4-203ENST00000587975 TBC1D32Q96NH3 1257 aa29.38■■■□□ 2.29
R3HDM4-203ENST00000587975 BECN1Q14457 450 aa29.37■■■□□ 2.29
R3HDM4-203ENST00000587975 CRB1P82279 1406 aa29.37■■■□□ 2.29
R3HDM4-203ENST00000587975 DCTN1Q14203 1278 aa29.36■■■□□ 2.29
R3HDM4-203ENST00000587975 HTATSF1O43719 755 aaKnown RBP29.34■■■□□ 2.29
R3HDM4-203ENST00000587975 CHD2O14647 1828 aaKnown RBP29.34■■■□□ 2.29
R3HDM4-203ENST00000587975 GAS2L2Q8NHY3 880 aa29.34■■■□□ 2.29
R3HDM4-203ENST00000587975 ELL2O00472 640 aaPredicted RBP29.33■■■□□ 2.29
R3HDM4-203ENST00000587975 AMPHP49418 695 aa29.33■■■□□ 2.29
R3HDM4-203ENST00000587975 MARF1Q9Y4F3 1742 aaKnown RBP29.33■■■□□ 2.29
R3HDM4-203ENST00000587975 DEKP35659 375 aaKnown RBP29.32■■■□□ 2.28
R3HDM4-203ENST00000587975 INTS3Q68E01 1043 aaKnown RBP29.32■■■□□ 2.28
R3HDM4-203ENST00000587975 ANKLE2Q86XL3 938 aa29.32■■■□□ 2.28
R3HDM4-203ENST00000587975 CHD1LQ86WJ1 897 aa29.31■■■□□ 2.28
R3HDM4-203ENST00000587975 PTPRCP08575 1304 aa29.31■■■□□ 2.28
R3HDM4-203ENST00000587975 RTL1A6NKG5 1358 aa29.31■■■□□ 2.28
R3HDM4-203ENST00000587975 PLPPR3Q6T4P5 718 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms