RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
VAT1-204ENST00000587147 EVA1CP58658 441 aa23.27■■□□□ 1.32
VAT1-204ENST00000587147 PANK3Q9H999 370 aa23.27■■□□□ 1.32
VAT1-204ENST00000587147 BLMP54132 1417 aaPredicted RBP23.26■■□□□ 1.31
VAT1-204ENST00000587147 SPATA31A1Q5TZJ5 1347 aa23.26■■□□□ 1.31
VAT1-204ENST00000587147 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
VAT1-204ENST00000587147 GGNBP2Q9H3C7 697 aa23.25■■□□□ 1.31
VAT1-204ENST00000587147 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
VAT1-204ENST00000587147 RTL1A6NKG5 1358 aa23.25■■□□□ 1.31
VAT1-204ENST00000587147 CRB1P82279 1406 aa23.25■■□□□ 1.31
VAT1-204ENST00000587147 THRAP3Q9Y2W1 955 aaKnown RBP23.24■■□□□ 1.31
VAT1-204ENST00000587147 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
VAT1-204ENST00000587147 SOX12O15370 315 aa23.23■■□□□ 1.31
VAT1-204ENST00000587147 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
VAT1-204ENST00000587147 WDR17Q8IZU2 1322 aa23.23■■□□□ 1.31
VAT1-204ENST00000587147 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
VAT1-204ENST00000587147 AXIN2Q9Y2T1 843 aa23.22■■□□□ 1.31
VAT1-204ENST00000587147 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
VAT1-204ENST00000587147 BARGINQ6ZT62 677 aa23.21■■□□□ 1.31
VAT1-204ENST00000587147 KNSTRNQ9Y448 316 aa23.21■■□□□ 1.31
VAT1-204ENST00000587147 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
VAT1-204ENST00000587147 ZBTB7CA1YPR0 619 aa23.2■■□□□ 1.3
VAT1-204ENST00000587147 IP6K1Q92551 441 aa23.2■■□□□ 1.3
VAT1-204ENST00000587147 MAP3K19Q56UN5 1328 aa23.19■■□□□ 1.3
VAT1-204ENST00000587147 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
VAT1-204ENST00000587147 ERBB3P21860 1342 aa23.18■■□□□ 1.3
VAT1-204ENST00000587147 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
VAT1-204ENST00000587147 SEPT12Q8IYM1 358 aa23.17■■□□□ 1.3
VAT1-204ENST00000587147 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
VAT1-204ENST00000587147 CARD10Q9BWT7 1032 aa23.16■■□□□ 1.3
VAT1-204ENST00000587147 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
VAT1-204ENST00000587147 AMPHP49418 695 aa23.15■■□□□ 1.3
VAT1-204ENST00000587147 FAM98CQ17RN3 349 aaKnown RBP23.15■■□□□ 1.3
VAT1-204ENST00000587147 TOM1L2Q6ZVM7 507 aa23.15■■□□□ 1.3
VAT1-204ENST00000587147 CDCA7Q9BWT1 371 aaPredicted RBP23.15■■□□□ 1.3
VAT1-204ENST00000587147 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
VAT1-204ENST00000587147 FLT4P35916 1363 aa23.14■■□□□ 1.3
VAT1-204ENST00000587147 PARP4Q9UKK3 1724 aaKnown RBP23.14■■□□□ 1.3
VAT1-204ENST00000587147 HOXC9P31274 260 aa23.14■■□□□ 1.29
VAT1-204ENST00000587147 WNK3Q9BYP7 1800 aa23.14■■□□□ 1.29
VAT1-204ENST00000587147 AMER1Q5JTC6 1135 aaPredicted RBP23.13■■□□□ 1.29
VAT1-204ENST00000587147 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
VAT1-204ENST00000587147 INSRP06213 1382 aa23.12■■□□□ 1.29
VAT1-204ENST00000587147 MAP2P11137 1827 aaKnown RBP23.11■■□□□ 1.29
VAT1-204ENST00000587147 ANKRD24Q8TF21 1146 aa23.11■■□□□ 1.29
VAT1-204ENST00000587147 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
VAT1-204ENST00000587147 RRS1Q15050 365 aaKnown RBP23.1■■□□□ 1.29
VAT1-204ENST00000587147 PEAK1Q9H792 1746 aa23.1■■□□□ 1.29
VAT1-204ENST00000587147 KRT27Q7Z3Y8 459 aa23.09■■□□□ 1.29
VAT1-204ENST00000587147 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
VAT1-204ENST00000587147 DISP2A7MBM2 1401 aa23.08■■□□□ 1.28
VAT1-204ENST00000587147 A0A0G2JS52 829 aa23.07■■□□□ 1.28
VAT1-204ENST00000587147 FBLN1P23142 703 aa23.07■■□□□ 1.28
VAT1-204ENST00000587147 MYT1Q01538 1121 aa23.07■■□□□ 1.28
VAT1-204ENST00000587147 MORC1Q86VD1 984 aa23.07■■□□□ 1.28
VAT1-204ENST00000587147 CCDC125Q86Z20 511 aa23.05■■□□□ 1.28
VAT1-204ENST00000587147 NLRP2Q9NX02 1062 aa23.05■■□□□ 1.28
VAT1-204ENST00000587147 POLKQ9UBT6 870 aa23.05■■□□□ 1.28
VAT1-204ENST00000587147 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
VAT1-204ENST00000587147 EMILIN1Q9Y6C2 1016 aa23.04■■□□□ 1.28
VAT1-204ENST00000587147 EP400Q96L91 3159 aa23.03■■□□□ 1.28
VAT1-204ENST00000587147 UPF1Q92900 1129 aaKnown RBP eCLIP23.03■■□□□ 1.28
VAT1-204ENST00000587147 HSP90AB2PQ58FF8 381 aa23.02■■□□□ 1.28
VAT1-204ENST00000587147 PDE3BQ13370 1112 aa23.01■■□□□ 1.27
VAT1-204ENST00000587147 DDB1Q16531 1140 aa23■■□□□ 1.27
VAT1-204ENST00000587147 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
VAT1-204ENST00000587147 IL2RBP14784 551 aa22.99■■□□□ 1.27
VAT1-204ENST00000587147 TNS2Q63HR2 1409 aa22.99■■□□□ 1.27
VAT1-204ENST00000587147 FAM196AQ6ZSG2 479 aa22.98■■□□□ 1.27
VAT1-204ENST00000587147 LTV1Q96GA3 475 aaPredicted RBP22.98■■□□□ 1.27
VAT1-204ENST00000587147 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
VAT1-204ENST00000587147 BCL9O00512 1426 aa22.98■■□□□ 1.27
VAT1-204ENST00000587147 RGPD2P0DJD1 1756 aa22.97■■□□□ 1.27
VAT1-204ENST00000587147 TNNT2P45379 298 aaPredicted RBP22.97■■□□□ 1.27
VAT1-204ENST00000587147 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
VAT1-204ENST00000587147 OVOS2A0A0G2JMS6 1433 aa22.96■■□□□ 1.27
VAT1-204ENST00000587147 EXOC5O00471 708 aa22.95■■□□□ 1.26
VAT1-204ENST00000587147 RGPD1P0DJD0 1748 aa22.95■■□□□ 1.26
VAT1-204ENST00000587147 CC2D1BQ5T0F9 858 aaKnown RBP22.94■■□□□ 1.26
VAT1-204ENST00000587147 NBPF6Q5VWK0 638 aa22.94■■□□□ 1.26
VAT1-204ENST00000587147 NBPF4Q96M43 638 aa22.94■■□□□ 1.26
VAT1-204ENST00000587147 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
VAT1-204ENST00000587147 RAPGEF4Q8WZA2 1011 aa22.89■■□□□ 1.25
VAT1-204ENST00000587147 MEGF6O75095 1541 aa22.88■■□□□ 1.25
VAT1-204ENST00000587147 IGSF1Q8N6C5 1336 aa22.88■■□□□ 1.25
VAT1-204ENST00000587147 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
VAT1-204ENST00000587147 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
VAT1-204ENST00000587147 MTHFSP49914 203 aa22.87■■□□□ 1.25
VAT1-204ENST00000587147 MARCH10Q8NA82 808 aaPredicted RBP22.87■■□□□ 1.25
VAT1-204ENST00000587147 EYA1Q99502 592 aa22.87■■□□□ 1.25
VAT1-204ENST00000587147 SBF2Q86WG5 1849 aa22.87■■□□□ 1.25
VAT1-204ENST00000587147 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
VAT1-204ENST00000587147 PKD1L3Q7Z443 1732 aa22.85■■□□□ 1.25
VAT1-204ENST00000587147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.85■■□□□ 1.25
VAT1-204ENST00000587147 PARD3Q8TEW0 1356 aa22.85■■□□□ 1.25
VAT1-204ENST00000587147 SHANK3Q9BYB0 1731 aa22.85■■□□□ 1.25
VAT1-204ENST00000587147 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
VAT1-204ENST00000587147 ZCRB1Q8TBF4 217 aaKnown RBP22.84■■□□□ 1.25
VAT1-204ENST00000587147 USHBP1Q8N6Y0 703 aa22.83■■□□□ 1.25
VAT1-204ENST00000587147 KDRP35968 1356 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms