RNA–Protein interactions for RNA: ENST00000586915.1

CLPTM1-205, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-205ENST00000586915 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
CLPTM1-205ENST00000586915 CRB1P82279 1406 aa23.85■■□□□ 1.41
CLPTM1-205ENST00000586915 SEPT12Q8IYM1 358 aa23.85■■□□□ 1.41
CLPTM1-205ENST00000586915 FAM98CQ17RN3 349 aaKnown RBP23.84■■□□□ 1.41
CLPTM1-205ENST00000586915 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
CLPTM1-205ENST00000586915 FYB1O15117 783 aa23.83■■□□□ 1.41
CLPTM1-205ENST00000586915 LARP1Q6PKG0 1096 aaKnown RBP23.83■■□□□ 1.41
CLPTM1-205ENST00000586915 WNK3Q9BYP7 1800 aa23.82■■□□□ 1.4
CLPTM1-205ENST00000586915 C11orf95C9JLR9 678 aaPredicted RBP23.82■■□□□ 1.4
CLPTM1-205ENST00000586915 AXIN2Q9Y2T1 843 aa23.82■■□□□ 1.4
CLPTM1-205ENST00000586915 ANKRD26Q9UPS8 1709 aa23.81■■□□□ 1.4
CLPTM1-205ENST00000586915 WDR17Q8IZU2 1322 aa23.81■■□□□ 1.4
CLPTM1-205ENST00000586915 BLMP54132 1417 aaPredicted RBP23.8■■□□□ 1.4
CLPTM1-205ENST00000586915 KIF7Q2M1P5 1343 aa23.8■■□□□ 1.4
CLPTM1-205ENST00000586915 PARP4Q9UKK3 1724 aaKnown RBP23.79■■□□□ 1.4
CLPTM1-205ENST00000586915 A0A0G2JS52 829 aa23.79■■□□□ 1.4
CLPTM1-205ENST00000586915 MYT1Q01538 1121 aa23.79■■□□□ 1.4
CLPTM1-205ENST00000586915 BARGINQ6ZT62 677 aa23.79■■□□□ 1.4
CLPTM1-205ENST00000586915 UPF1Q92900 1129 aaKnown RBP eCLIP23.79■■□□□ 1.45e-12■■■■■ 62.3
CLPTM1-205ENST00000586915 GGNBP2Q9H3C7 697 aa23.79■■□□□ 1.4
CLPTM1-205ENST00000586915 TCP11L2Q8N4U5 519 aa23.78■■□□□ 1.4
CLPTM1-205ENST00000586915 THRAP3Q9Y2W1 955 aaKnown RBP23.78■■□□□ 1.4
CLPTM1-205ENST00000586915 FAM208AQ9UK61 1670 aaKnown RBP23.78■■□□□ 1.4
CLPTM1-205ENST00000586915 CGNL1Q0VF96 1302 aa23.78■■□□□ 1.4
CLPTM1-205ENST00000586915 RTL1A6NKG5 1358 aa23.78■■□□□ 1.4
CLPTM1-205ENST00000586915 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
CLPTM1-205ENST00000586915 ERBB3P21860 1342 aa23.77■■□□□ 1.4
CLPTM1-205ENST00000586915 LRRC37A3O60309 1634 aa23.75■■□□□ 1.39
CLPTM1-205ENST00000586915 TOM1L2Q6ZVM7 507 aa23.75■■□□□ 1.39
CLPTM1-205ENST00000586915 KRT27Q7Z3Y8 459 aa23.75■■□□□ 1.39
CLPTM1-205ENST00000586915 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
CLPTM1-205ENST00000586915 CSB-PGBD3P0DP91 1061 aa23.73■■□□□ 1.39
CLPTM1-205ENST00000586915 PANK3Q9H999 370 aa23.73■■□□□ 1.39
CLPTM1-205ENST00000586915 IP6K1Q92551 441 aa23.72■■□□□ 1.39
CLPTM1-205ENST00000586915 NSD2O96028 1365 aa23.72■■□□□ 1.39
CLPTM1-205ENST00000586915 PEAK1Q9H792 1746 aa23.71■■□□□ 1.39
CLPTM1-205ENST00000586915 CCDC7Q96M83 1385 aa23.71■■□□□ 1.39
CLPTM1-205ENST00000586915 CARD10Q9BWT7 1032 aa23.71■■□□□ 1.39
CLPTM1-205ENST00000586915 EP400Q96L91 3159 aa23.71■■□□□ 1.39
CLPTM1-205ENST00000586915 DISP2A7MBM2 1401 aa23.7■■□□□ 1.38
CLPTM1-205ENST00000586915 KIF24Q5T7B8 1368 aa23.7■■□□□ 1.38
CLPTM1-205ENST00000586915 HOXC9P31274 260 aa23.69■■□□□ 1.38
CLPTM1-205ENST00000586915 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
CLPTM1-205ENST00000586915 FBLN1P23142 703 aa23.68■■□□□ 1.38
CLPTM1-205ENST00000586915 AMPHP49418 695 aa23.68■■□□□ 1.38
CLPTM1-205ENST00000586915 RRS1Q15050 365 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-205ENST00000586915 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
CLPTM1-205ENST00000586915 FLT4P35916 1363 aa23.66■■□□□ 1.38
CLPTM1-205ENST00000586915 CDCA7Q9BWT1 371 aaPredicted RBP23.66■■□□□ 1.38
CLPTM1-205ENST00000586915 RGPD1P0DJD0 1748 aa23.65■■□□□ 1.38
CLPTM1-205ENST00000586915 CCDC125Q86Z20 511 aa23.64■■□□□ 1.37
CLPTM1-205ENST00000586915 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.37
CLPTM1-205ENST00000586915 NLRP2Q9NX02 1062 aa23.63■■□□□ 1.37
CLPTM1-205ENST00000586915 KNSTRNQ9Y448 316 aa23.63■■□□□ 1.37
CLPTM1-205ENST00000586915 MAP2P11137 1827 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-205ENST00000586915 INSRP06213 1382 aa23.63■■□□□ 1.37
CLPTM1-205ENST00000586915 TNS2Q63HR2 1409 aa23.62■■□□□ 1.37
CLPTM1-205ENST00000586915 PDE3BQ13370 1112 aa23.62■■□□□ 1.37
CLPTM1-205ENST00000586915 RGPD2P0DJD1 1756 aa23.62■■□□□ 1.37
CLPTM1-205ENST00000586915 TNS1Q9HBL0 1735 aaKnown RBP23.62■■□□□ 1.37
CLPTM1-205ENST00000586915 EMILIN1Q9Y6C2 1016 aa23.6■■□□□ 1.37
CLPTM1-205ENST00000586915 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
CLPTM1-205ENST00000586915 DDB1Q16531 1140 aa23.59■■□□□ 1.37
CLPTM1-205ENST00000586915 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
CLPTM1-205ENST00000586915 LTV1Q96GA3 475 aaPredicted RBP23.59■■□□□ 1.37
CLPTM1-205ENST00000586915 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.37
CLPTM1-205ENST00000586915 FAM196AQ6ZSG2 479 aa23.58■■□□□ 1.37
CLPTM1-205ENST00000586915 IL2RBP14784 551 aa23.56■■□□□ 1.36
CLPTM1-205ENST00000586915 PER1O15534 1290 aaPredicted RBP23.55■■□□□ 1.36
CLPTM1-205ENST00000586915 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
CLPTM1-205ENST00000586915 BCL9O00512 1426 aa23.54■■□□□ 1.36
CLPTM1-205ENST00000586915 SF3B2Q13435 895 aaKnown RBP23.54■■□□□ 1.36
CLPTM1-205ENST00000586915 POLKQ9UBT6 870 aa23.54■■□□□ 1.36
CLPTM1-205ENST00000586915 NPC1L1Q9UHC9 1359 aa23.53■■□□□ 1.36
CLPTM1-205ENST00000586915 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
CLPTM1-205ENST00000586915 MORC1Q86VD1 984 aa23.53■■□□□ 1.36
CLPTM1-205ENST00000586915 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
CLPTM1-205ENST00000586915 NCAPD2Q15021 1401 aa23.52■■□□□ 1.36
CLPTM1-205ENST00000586915 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
CLPTM1-205ENST00000586915 MEGF6O75095 1541 aa23.52■■□□□ 1.36
CLPTM1-205ENST00000586915 SHANK3Q9BYB0 1731 aa23.5■■□□□ 1.35
CLPTM1-205ENST00000586915 EXOC5O00471 708 aa23.5■■□□□ 1.35
CLPTM1-205ENST00000586915 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
CLPTM1-205ENST00000586915 MARCH10Q8NA82 808 aaPredicted RBP23.49■■□□□ 1.35
CLPTM1-205ENST00000586915 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
CLPTM1-205ENST00000586915 BAG6P46379 1132 aa23.47■■□□□ 1.35
CLPTM1-205ENST00000586915 RGPD3A6NKT7 1758 aaPredicted RBP23.46■■□□□ 1.35
CLPTM1-205ENST00000586915 TRIM37O94972 964 aa23.46■■□□□ 1.35
CLPTM1-205ENST00000586915 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
CLPTM1-205ENST00000586915 NHSQ6T4R5 1651 aa23.46■■□□□ 1.35
CLPTM1-205ENST00000586915 RGPD4Q7Z3J3 1758 aa23.46■■□□□ 1.35
CLPTM1-205ENST00000586915 DEFB132Q7Z7B7 95 aa23.46■■□□□ 1.35
CLPTM1-205ENST00000586915 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.34
CLPTM1-205ENST00000586915 PKD1L3Q7Z443 1732 aa23.45■■□□□ 1.34
CLPTM1-205ENST00000586915 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
CLPTM1-205ENST00000586915 RREB1Q92766 1687 aa23.42■■□□□ 1.34
CLPTM1-205ENST00000586915 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
CLPTM1-205ENST00000586915 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
CLPTM1-205ENST00000586915 PARD3Q8TEW0 1356 aa23.41■■□□□ 1.34
CLPTM1-205ENST00000586915 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms