RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-209	ENST00000586856	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
ERCC2-209	ENST00000586856	LARP1	Q6PKG0	1096 aa	Known RBP	33.46	■■■□□ 2.95
ERCC2-209	ENST00000586856		A0A0G2JS52	829 aa		33.45	■■■□□ 2.95
ERCC2-209	ENST00000586856	MYT1	Q01538	1121 aa		33.45	■■■□□ 2.95
ERCC2-209	ENST00000586856	POLR3GL	Q9BT43	218 aa		33.43	■■■□□ 2.94
ERCC2-209	ENST00000586856	AXIN2	Q9Y2T1	843 aa		33.41	■■■□□ 2.94
ERCC2-209	ENST00000586856	CRB1	P82279	1406 aa		33.41	■■■□□ 2.94
ERCC2-209	ENST00000586856	NSD3	Q9BZ95	1437 aa		33.4	■■■□□ 2.94
ERCC2-209	ENST00000586856	USP35	Q9P2H5	1018 aa		33.4	■■■□□ 2.94
ERCC2-209	ENST00000586856	COG3	Q96JB2	828 aa		33.39	■■■□□ 2.94
ERCC2-209	ENST00000586856	CARD14	Q9BXL6	1004 aa		33.37	■■■□□ 2.93
ERCC2-209	ENST00000586856	KRT27	Q7Z3Y8	459 aa		33.36	■■■□□ 2.93
ERCC2-209	ENST00000586856	WNK3	Q9BYP7	1800 aa		33.36	■■■□□ 2.93
ERCC2-209	ENST00000586856	WDR17	Q8IZU2	1322 aa		33.35	■■■□□ 2.93
ERCC2-209	ENST00000586856	FYB1	O15117	783 aa		33.35	■■■□□ 2.93
ERCC2-209	ENST00000586856	TCP11L2	Q8N4U5	519 aa		33.35	■■■□□ 2.93
ERCC2-209	ENST00000586856	BARGIN	Q6ZT62	677 aa		33.34	■■■□□ 2.93
ERCC2-209	ENST00000586856	GGNBP2	Q9H3C7	697 aa		33.34	■■■□□ 2.93
ERCC2-209	ENST00000586856	PARP4	Q9UKK3	1724 aa	Known RBP	33.31	■■■□□ 2.92
ERCC2-209	ENST00000586856	C11orf95	C9JLR9	678 aa	Predicted RBP	33.31	■■■□□ 2.92
ERCC2-209	ENST00000586856	TOM1L2	Q6ZVM7	507 aa		33.31	■■■□□ 2.92
ERCC2-209	ENST00000586856	THRAP3	Q9Y2W1	955 aa	Known RBP	33.31	■■■□□ 2.92
ERCC2-209	ENST00000586856	CSB-PGBD3	P0DP91	1061 aa		33.29	■■■□□ 2.92
ERCC2-209	ENST00000586856	EP400	Q96L91	3159 aa		33.28	■■■□□ 2.92
ERCC2-209	ENST00000586856	BLM	P54132	1417 aa	Predicted RBP	33.27	■■■□□ 2.92
ERCC2-209	ENST00000586856	LRRC37A3	O60309	1634 aa		33.26	■■■□□ 2.91
ERCC2-209	ENST00000586856	ERBB3	P21860	1342 aa		33.26	■■■□□ 2.91
ERCC2-209	ENST00000586856	MAP3K19	Q56UN5	1328 aa		33.26	■■■□□ 2.91
ERCC2-209	ENST00000586856	ANKRD26	Q9UPS8	1709 aa		33.25	■■■□□ 2.91
ERCC2-209	ENST00000586856	CGNL1	Q0VF96	1302 aa		33.24	■■■□□ 2.91
ERCC2-209	ENST00000586856	KIF7	Q2M1P5	1343 aa		33.24	■■■□□ 2.91
ERCC2-209	ENST00000586856	FAM208A	Q9UK61	1670 aa	Known RBP	33.23	■■■□□ 2.91
ERCC2-209	ENST00000586856	FBLN1	P23142	703 aa		33.23	■■■□□ 2.91
ERCC2-209	ENST00000586856	CARD10	Q9BWT7	1032 aa		33.22	■■■□□ 2.91
ERCC2-209	ENST00000586856	IP6K1	Q92551	441 aa		33.21	■■■□□ 2.91
ERCC2-209	ENST00000586856	RTL1	A6NKG5	1358 aa		33.21	■■■□□ 2.91
ERCC2-209	ENST00000586856	FAM182B	Q5T319	152 aa		33.2	■■■□□ 2.91
ERCC2-209	ENST00000586856	ANKRD24	Q8TF21	1146 aa		33.2	■■■□□ 2.91
ERCC2-209	ENST00000586856	PANK3	Q9H999	370 aa		33.2	■■■□□ 2.91
ERCC2-209	ENST00000586856	CCDC7	Q96M83	1385 aa		33.2	■■■□□ 2.9
ERCC2-209	ENST00000586856	CCDC125	Q86Z20	511 aa		33.19	■■■□□ 2.9
ERCC2-209	ENST00000586856	RRS1	Q15050	365 aa	Known RBP	33.18	■■■□□ 2.9
ERCC2-209	ENST00000586856	PEAK1	Q9H792	1746 aa		33.18	■■■□□ 2.9
ERCC2-209	ENST00000586856	DISP2	A7MBM2	1401 aa		33.18	■■■□□ 2.9
ERCC2-209	ENST00000586856	RGPD1	P0DJD0	1748 aa		33.17	■■■□□ 2.9
ERCC2-209	ENST00000586856	HOXC9	P31274	260 aa		33.17	■■■□□ 2.9
ERCC2-209	ENST00000586856	AMPH	P49418	695 aa		33.17	■■■□□ 2.9
ERCC2-209	ENST00000586856	PDE3B	Q13370	1112 aa		33.15	■■■□□ 2.9
ERCC2-209	ENST00000586856	NLRP2	Q9NX02	1062 aa		33.15	■■■□□ 2.9
ERCC2-209	ENST00000586856	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.13	■■■□□ 2.89
ERCC2-209	ENST00000586856	TNS1	Q9HBL0	1735 aa	Known RBP	33.12	■■■□□ 2.89
ERCC2-209	ENST00000586856	LTV1	Q96GA3	475 aa	Predicted RBP	33.12	■■■□□ 2.89
ERCC2-209	ENST00000586856	RGPD2	P0DJD1	1756 aa		33.11	■■■□□ 2.89
ERCC2-209	ENST00000586856	DDB1	Q16531	1140 aa		33.09	■■■□□ 2.89
ERCC2-209	ENST00000586856	NSD2	O96028	1365 aa		33.09	■■■□□ 2.89
ERCC2-209	ENST00000586856	FLT4	P35916	1363 aa		33.09	■■■□□ 2.89
ERCC2-209	ENST00000586856	KIF24	Q5T7B8	1368 aa		33.09	■■■□□ 2.89
ERCC2-209	ENST00000586856	MAP2	P11137	1827 aa	Known RBP	33.08	■■■□□ 2.89
ERCC2-209	ENST00000586856	SF3B2	Q13435	895 aa	Known RBP	33.08	■■■□□ 2.89
ERCC2-209	ENST00000586856	FAM196A	Q6ZSG2	479 aa		33.08	■■■□□ 2.89
ERCC2-209	ENST00000586856	OVOS2	A0A0G2JMS6	1433 aa		33.06	■■■□□ 2.88
ERCC2-209	ENST00000586856	TNS2	Q63HR2	1409 aa		33.06	■■■□□ 2.88
ERCC2-209	ENST00000586856	SMG6	Q86US8	1419 aa	Known RBP	33.05	■■■□□ 2.88
ERCC2-209	ENST00000586856	EMILIN1	Q9Y6C2	1016 aa		33.05	■■■□□ 2.88
ERCC2-209	ENST00000586856	WASHC2A	Q641Q2	1341 aa		33.04	■■■□□ 2.88
ERCC2-209	ENST00000586856	INSR	P06213	1382 aa		33.04	■■■□□ 2.88
ERCC2-209	ENST00000586856	DEFB132	Q7Z7B7	95 aa		33.02	■■■□□ 2.88
ERCC2-209	ENST00000586856	KNSTRN	Q9Y448	316 aa		33.02	■■■□□ 2.88
ERCC2-209	ENST00000586856	IL2RB	P14784	551 aa		33.01	■■■□□ 2.87
ERCC2-209	ENST00000586856	HSP90AB2P	Q58FF8	381 aa		33.01	■■■□□ 2.87
ERCC2-209	ENST00000586856	SBF2	Q86WG5	1849 aa		33	■■■□□ 2.87
ERCC2-209	ENST00000586856	TRIM37	O94972	964 aa		32.98	■■■□□ 2.87
ERCC2-209	ENST00000586856	TNNT2	P45379	298 aa	Predicted RBP	32.98	■■■□□ 2.87
ERCC2-209	ENST00000586856	EXOC5	O00471	708 aa		32.97	■■■□□ 2.87
ERCC2-209	ENST00000586856	PPM1G	O15355	546 aa	Predicted RBP	32.97	■■■□□ 2.87
ERCC2-209	ENST00000586856	BAG6	P46379	1132 aa		32.97	■■■□□ 2.87
ERCC2-209	ENST00000586856	MARCH10	Q8NA82	808 aa	Predicted RBP	32.97	■■■□□ 2.87
ERCC2-209	ENST00000586856	POLK	Q9UBT6	870 aa		32.95	■■■□□ 2.87
ERCC2-209	ENST00000586856	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.94	■■■□□ 2.86
ERCC2-209	ENST00000586856	BCL9	O00512	1426 aa		32.94	■■■□□ 2.86
ERCC2-209	ENST00000586856	MEGF6	O75095	1541 aa		32.93	■■■□□ 2.86
ERCC2-209	ENST00000586856	NBPF6	Q5VWK0	638 aa		32.93	■■■□□ 2.86
ERCC2-209	ENST00000586856	NBPF4	Q96M43	638 aa		32.93	■■■□□ 2.86
ERCC2-209	ENST00000586856	MORC1	Q86VD1	984 aa		32.92	■■■□□ 2.86
ERCC2-209	ENST00000586856	SHANK3	Q9BYB0	1731 aa		32.91	■■■□□ 2.86
ERCC2-209	ENST00000586856	USHBP1	Q8N6Y0	703 aa		32.9	■■■□□ 2.86
ERCC2-209	ENST00000586856	PER1	O15534	1290 aa	Predicted RBP	32.89	■■■□□ 2.86
ERCC2-209	ENST00000586856	EN1	Q05925	392 aa	Predicted RBP	32.88	■■■□□ 2.85
ERCC2-209	ENST00000586856	NCAPD2	Q15021	1401 aa		32.85	■■■□□ 2.85
ERCC2-209	ENST00000586856	NHS	Q6T4R5	1651 aa		32.85	■■■□□ 2.85
ERCC2-209	ENST00000586856	APBA3	O96018	575 aa		32.85	■■■□□ 2.85
ERCC2-209	ENST00000586856	RREB1	Q92766	1687 aa		32.83	■■■□□ 2.85
ERCC2-209	ENST00000586856	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.83	■■■□□ 2.85
ERCC2-209	ENST00000586856	RGPD4	Q7Z3J3	1758 aa		32.83	■■■□□ 2.85
ERCC2-209	ENST00000586856	RAPGEF4	Q8WZA2	1011 aa		32.81	■■■□□ 2.84
ERCC2-209	ENST00000586856	PARD3	Q8TEW0	1356 aa		32.81	■■■□□ 2.84
ERCC2-209	ENST00000586856	CC2D1B	Q5T0F9	858 aa	Known RBP	32.8	■■■□□ 2.84
ERCC2-209	ENST00000586856	NPC1L1	Q9UHC9	1359 aa		32.8	■■■□□ 2.84
ERCC2-209	ENST00000586856	EIF4A2	Q14240	407 aa	Known RBP	32.79	■■■□□ 2.84
ERCC2-209	ENST00000586856	EZH2	Q15910	746 aa	Known RBP	32.79	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms