RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 ANP32CO43423 234 aa22.78■■□□□ 1.24
GCDH-203ENST00000585420 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
GCDH-203ENST00000585420 EVA1CP58658 441 aa22.77■■□□□ 1.24
GCDH-203ENST00000585420 KIF20BQ96Q89 1820 aa22.77■■□□□ 1.24
GCDH-203ENST00000585420 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.23
GCDH-203ENST00000585420 GLI3P10071 1580 aa22.76■■□□□ 1.23
GCDH-203ENST00000585420 COL18A1P39060 1754 aa22.76■■□□□ 1.23
GCDH-203ENST00000585420 COL5A2P05997 1499 aaPredicted RBP22.75■■□□□ 1.23
GCDH-203ENST00000585420 LARP1Q6PKG0 1096 aaKnown RBP22.75■■□□□ 1.23
GCDH-203ENST00000585420 RGS12O14924 1447 aa22.75■■□□□ 1.23
GCDH-203ENST00000585420 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
GCDH-203ENST00000585420 SPATA31A5Q5VU36 1347 aa22.73■■□□□ 1.23
GCDH-203ENST00000585420 SPATA31A7Q8IWB4 1347 aa22.73■■□□□ 1.23
GCDH-203ENST00000585420 MIER1Q8N108 512 aa22.73■■□□□ 1.23
GCDH-203ENST00000585420 RRS1Q15050 365 aaKnown RBP22.72■■□□□ 1.23
GCDH-203ENST00000585420 LTN1O94822 1766 aa22.72■■□□□ 1.23
GCDH-203ENST00000585420 MAP3K19Q56UN5 1328 aa22.72■■□□□ 1.23
GCDH-203ENST00000585420 USP35Q9P2H5 1018 aa22.71■■□□□ 1.23
GCDH-203ENST00000585420 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
GCDH-203ENST00000585420 FAM98CQ17RN3 349 aaKnown RBP22.7■■□□□ 1.22
GCDH-203ENST00000585420 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.22
GCDH-203ENST00000585420 RGPD5Q99666 1765 aa22.69■■□□□ 1.22
GCDH-203ENST00000585420 EP400Q96L91 3159 aa22.69■■□□□ 1.22
GCDH-203ENST00000585420 ONECUT3O60422 494 aaPredicted RBP22.68■■□□□ 1.22
GCDH-203ENST00000585420 AMER1Q5JTC6 1135 aaPredicted RBP22.68■■□□□ 1.22
GCDH-203ENST00000585420 IP6K1Q92551 441 aa22.68■■□□□ 1.22
GCDH-203ENST00000585420 PRKRIP1Q9H875 184 aaPredicted RBP22.68■■□□□ 1.22
GCDH-203ENST00000585420 ABCC6O95255 1503 aa22.67■■□□□ 1.22
GCDH-203ENST00000585420 AMPHP49418 695 aa22.67■■□□□ 1.22
GCDH-203ENST00000585420 WDR17Q8IZU2 1322 aa22.67■■□□□ 1.22
GCDH-203ENST00000585420 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
GCDH-203ENST00000585420 TOM1L2Q6ZVM7 507 aa22.66■■□□□ 1.22
GCDH-203ENST00000585420 SEPT12Q8IYM1 358 aa22.66■■□□□ 1.22
GCDH-203ENST00000585420 CRB1P82279 1406 aa22.66■■□□□ 1.22
GCDH-203ENST00000585420 SOCS7O14512 581 aa22.65■■□□□ 1.22
GCDH-203ENST00000585420 CSB-PGBD3P0DP91 1061 aa22.65■■□□□ 1.22
GCDH-203ENST00000585420 HOXC9P31274 260 aa22.65■■□□□ 1.22
GCDH-203ENST00000585420 ERBB3P21860 1342 aa22.65■■□□□ 1.22
GCDH-203ENST00000585420 NSD2O96028 1365 aa22.65■■□□□ 1.22
GCDH-203ENST00000585420 ANKRD24Q8TF21 1146 aa22.64■■□□□ 1.21
GCDH-203ENST00000585420 EMILIN1Q9Y6C2 1016 aa22.64■■□□□ 1.21
GCDH-203ENST00000585420 NPC1L1Q9UHC9 1359 aa22.64■■□□□ 1.21
GCDH-203ENST00000585420 A0A0G2JS52 829 aa22.63■■□□□ 1.21
GCDH-203ENST00000585420 MYT1Q01538 1121 aa22.63■■□□□ 1.21
GCDH-203ENST00000585420 TCP11L2Q8N4U5 519 aa22.63■■□□□ 1.21
GCDH-203ENST00000585420 BLMP54132 1417 aaPredicted RBP22.63■■□□□ 1.21
GCDH-203ENST00000585420 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
GCDH-203ENST00000585420 RALBP1Q15311 655 aa22.62■■□□□ 1.21
GCDH-203ENST00000585420 MORC1Q86VD1 984 aa22.62■■□□□ 1.21
GCDH-203ENST00000585420 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
GCDH-203ENST00000585420 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
GCDH-203ENST00000585420 THRAP3Q9Y2W1 955 aaKnown RBP22.61■■□□□ 1.21
GCDH-203ENST00000585420 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
GCDH-203ENST00000585420 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
GCDH-203ENST00000585420 HSP90AB2PQ58FF8 381 aa22.6■■□□□ 1.21
GCDH-203ENST00000585420 POLKQ9UBT6 870 aa22.6■■□□□ 1.21
GCDH-203ENST00000585420 PARD3Q8TEW0 1356 aa22.6■■□□□ 1.21
GCDH-203ENST00000585420 PEAK1Q9H792 1746 aa22.6■■□□□ 1.21
GCDH-203ENST00000585420 CARD10Q9BWT7 1032 aa22.6■■□□□ 1.21
GCDH-203ENST00000585420 FLT4P35916 1363 aa22.58■■□□□ 1.21
GCDH-203ENST00000585420 NLRP2Q9NX02 1062 aa22.58■■□□□ 1.21
GCDH-203ENST00000585420 KIF24Q5T7B8 1368 aa22.58■■□□□ 1.2
GCDH-203ENST00000585420 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
GCDH-203ENST00000585420 MAP2P11137 1827 aaKnown RBP22.57■■□□□ 1.2
GCDH-203ENST00000585420 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
GCDH-203ENST00000585420 INSRP06213 1382 aa22.56■■□□□ 1.2
GCDH-203ENST00000585420 KRT27Q7Z3Y8 459 aa22.55■■□□□ 1.2
GCDH-203ENST00000585420 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
GCDH-203ENST00000585420 CCER2I3L3R5 266 aa22.51■■□□□ 1.19
GCDH-203ENST00000585420 FAM182BQ5T319 152 aa22.51■■□□□ 1.19
GCDH-203ENST00000585420 NBPF6Q5VWK0 638 aa22.51■■□□□ 1.19
GCDH-203ENST00000585420 NBPF4Q96M43 638 aa22.51■■□□□ 1.19
GCDH-203ENST00000585420 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.19
GCDH-203ENST00000585420 DISP2A7MBM2 1401 aa22.5■■□□□ 1.19
GCDH-203ENST00000585420 SMG6Q86US8 1419 aaKnown RBP22.5■■□□□ 1.19
GCDH-203ENST00000585420 RGPD2P0DJD1 1756 aa22.48■■□□□ 1.19
GCDH-203ENST00000585420 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
GCDH-203ENST00000585420 FAM208AQ9UK61 1670 aaKnown RBP22.48■■□□□ 1.19
GCDH-203ENST00000585420 PDE3BQ13370 1112 aa22.48■■□□□ 1.19
GCDH-203ENST00000585420 DDB1Q16531 1140 aa22.48■■□□□ 1.19
GCDH-203ENST00000585420 USHBP1Q8N6Y0 703 aa22.48■■□□□ 1.19
GCDH-203ENST00000585420 CDCA7Q9BWT1 371 aaPredicted RBP22.48■■□□□ 1.19
GCDH-203ENST00000585420 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
GCDH-203ENST00000585420 WNK3Q9BYP7 1800 aa22.47■■□□□ 1.19
GCDH-203ENST00000585420 IL2RBP14784 551 aa22.46■■□□□ 1.19
GCDH-203ENST00000585420 MTHFSP49914 203 aa22.45■■□□□ 1.19
GCDH-203ENST00000585420 EIF4A2Q14240 407 aaKnown RBP22.45■■□□□ 1.19
GCDH-203ENST00000585420 MRS2Q9HD23 443 aa22.45■■□□□ 1.19
GCDH-203ENST00000585420 LRRC37A3O60309 1634 aa22.45■■□□□ 1.18
GCDH-203ENST00000585420 CCDC184Q52MB2 194 aa22.45■■□□□ 1.18
GCDH-203ENST00000585420 EXOC5O00471 708 aa22.43■■□□□ 1.18
GCDH-203ENST00000585420 EYA1Q99502 592 aa22.43■■□□□ 1.18
GCDH-203ENST00000585420 MARCH10Q8NA82 808 aaPredicted RBP22.4■■□□□ 1.18
GCDH-203ENST00000585420 MEGF6O75095 1541 aa22.39■■□□□ 1.18
GCDH-203ENST00000585420 TNS2Q63HR2 1409 aa22.39■■□□□ 1.18
GCDH-203ENST00000585420 FAM196AQ6ZSG2 479 aa22.39■■□□□ 1.17
GCDH-203ENST00000585420 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
GCDH-203ENST00000585420 IL13P35225 146 aa22.37■■□□□ 1.17
GCDH-203ENST00000585420 RAPGEF4Q8WZA2 1011 aa22.37■■□□□ 1.17
GCDH-203ENST00000585420 IGSF1Q8N6C5 1336 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms