RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	COL14A1	Q05707	1796 aa	Known RBP	13.54	□□□□□ -0.24
EIF4A1-231	ENST00000584054	AXIN2	Q9Y2T1	843 aa		13.54	□□□□□ -0.24
EIF4A1-231	ENST00000584054	COL3A1	P02461	1466 aa	Predicted RBP	13.54	□□□□□ -0.24
EIF4A1-231	ENST00000584054	MAP2	P11137	1827 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	HOXC9	P31274	260 aa		13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	MTHFS	P49914	203 aa		13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	ZC3H6	P61129	1189 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	RRS1	Q15050	365 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	DIEXF	Q68CQ4	756 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	EMILIN1	Q9Y6C2	1016 aa		13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	FLT4	P35916	1363 aa		13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	BCL9L	Q86UU0	1499 aa		13.53	□□□□□ -0.24
EIF4A1-231	ENST00000584054	NCAPD2	Q15021	1401 aa		13.52	□□□□□ -0.25
EIF4A1-231	ENST00000584054	NWD2	Q9ULI1	1742 aa		13.52	□□□□□ -0.25
EIF4A1-231	ENST00000584054	LTN1	O94822	1766 aa		13.52	□□□□□ -0.25
EIF4A1-231	ENST00000584054	SLC4A2	P04920	1241 aa		13.51	□□□□□ -0.25
EIF4A1-231	ENST00000584054	PRDM11	Q9NQV5	511 aa		13.51	□□□□□ -0.25
EIF4A1-231	ENST00000584054	NRAP	Q86VF7	1730 aa		13.5	□□□□□ -0.25
EIF4A1-231	ENST00000584054	COL5A2	P05997	1499 aa	Predicted RBP	13.5	□□□□□ -0.25
EIF4A1-231	ENST00000584054	HSP90AB2P	Q58FF8	381 aa		13.5	□□□□□ -0.25
EIF4A1-231	ENST00000584054	ERBB3	P21860	1342 aa		13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	NUTM2E	B1AL46	878 aa	Predicted RBP	13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	ANP32C	O43423	234 aa		13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	IL13	P35225	146 aa		13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.49	□□□□□ -0.25
EIF4A1-231	ENST00000584054	ADAMTS2	O95450	1211 aa		13.48	□□□□□ -0.25
EIF4A1-231	ENST00000584054	TNNT2	P45379	298 aa	Predicted RBP	13.48	□□□□□ -0.25
EIF4A1-231	ENST00000584054	CHRNA2	Q15822	529 aa		13.48	□□□□□ -0.25
EIF4A1-231	ENST00000584054	PLCH1	Q4KWH8	1693 aa		13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	WDR17	Q8IZU2	1322 aa		13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	SOX12	O15370	315 aa		13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	MYCN	P04198	464 aa	Predicted RBP	13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	AMPH	P49418	695 aa		13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	UNC5CL	Q8IV45	518 aa		13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	RGPD1	P0DJD0	1748 aa		13.47	□□□□□ -0.25
EIF4A1-231	ENST00000584054	CCER2	I3L3R5	266 aa		13.46	□□□□□ -0.25
EIF4A1-231	ENST00000584054	HAP1	P54257	671 aa	Predicted RBP	13.46	□□□□□ -0.25
EIF4A1-231	ENST00000584054	EIF4A2	Q14240	407 aa	Known RBP	13.46	□□□□□ -0.25
EIF4A1-231	ENST00000584054	BTG4	Q9NY30	223 aa		13.46	□□□□□ -0.25
EIF4A1-231	ENST00000584054	ATRN	O75882	1429 aa		13.46	□□□□□ -0.26
EIF4A1-231	ENST00000584054	PLEKHG2	Q9H7P9	1386 aa		13.45	□□□□□ -0.26
EIF4A1-231	ENST00000584054	VPS72	Q15906	364 aa		13.45	□□□□□ -0.26
EIF4A1-231	ENST00000584054	RGS17	Q9UGC6	210 aa	Predicted RBP	13.45	□□□□□ -0.26
EIF4A1-231	ENST00000584054	RGPD5	Q99666	1765 aa		13.45	□□□□□ -0.26
EIF4A1-231	ENST00000584054	KDR	P35968	1356 aa		13.45	□□□□□ -0.26
EIF4A1-231	ENST00000584054	IGSF1	Q8N6C5	1336 aa		13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	ONECUT3	O60422	494 aa	Predicted RBP	13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	CCDC184	Q52MB2	194 aa		13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	ANKRD24	Q8TF21	1146 aa		13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	NGLY1	Q96IV0	654 aa		13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	C8orf37	Q96NL8	207 aa		13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	CARD10	Q9BWT7	1032 aa		13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	FAM208A	Q9UK61	1670 aa	Known RBP	13.44	□□□□□ -0.26
EIF4A1-231	ENST00000584054	AFF2	P51816	1311 aa		13.43	□□□□□ -0.26
EIF4A1-231	ENST00000584054	DIAPH1	O60610	1272 aa	Known RBP	13.43	□□□□□ -0.26
EIF4A1-231	ENST00000584054	CRB1	P82279	1406 aa		13.43	□□□□□ -0.26
EIF4A1-231	ENST00000584054	EYA1	Q99502	592 aa		13.43	□□□□□ -0.26
EIF4A1-231	ENST00000584054	SPATA31A5	Q5VU36	1347 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	SPATA31A7	Q8IWB4	1347 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	PLEKHG5	O94827	1062 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	NBPF6	Q5VWK0	638 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	LARP1	Q6PKG0	1096 aa	Known RBP	13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	MIER1	Q8N108	512 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	PNISR	Q8TF01	805 aa	Known RBP	13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	NBPF4	Q96M43	638 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	CFAP53	Q96M91	514 aa		13.42	□□□□□ -0.26
EIF4A1-231	ENST00000584054	SPATA31A1	Q5TZJ5	1347 aa		13.41	□□□□□ -0.26
EIF4A1-231	ENST00000584054	DISP2	A7MBM2	1401 aa		13.41	□□□□□ -0.26
EIF4A1-231	ENST00000584054	USP21	Q9UK80	565 aa		13.41	□□□□□ -0.26
EIF4A1-231	ENST00000584054	THRAP3	Q9Y2W1	955 aa	Known RBP	13.41	□□□□□ -0.26
EIF4A1-231	ENST00000584054	PPM1G	O15355	546 aa	Predicted RBP	13.4	□□□□□ -0.26
EIF4A1-231	ENST00000584054	HOXD11	P31277	338 aa	Predicted RBP	13.4	□□□□□ -0.26
EIF4A1-231	ENST00000584054	CNGB1	Q14028	1251 aa	Predicted RBP	13.4	□□□□□ -0.26
EIF4A1-231	ENST00000584054	ZNF772	Q68DY9	489 aa	Predicted RBP	13.4	□□□□□ -0.26
EIF4A1-231	ENST00000584054	BARGIN	Q6ZT62	677 aa		13.4	□□□□□ -0.26
EIF4A1-231	ENST00000584054	MEX3C	Q5U5Q3	659 aa	Known RBP	13.39	□□□□□ -0.27
EIF4A1-231	ENST00000584054	TRPC5	Q9UL62	973 aa	Predicted RBP	13.39	□□□□□ -0.27
EIF4A1-231	ENST00000584054	GLI3	P10071	1580 aa		13.38	□□□□□ -0.27
EIF4A1-231	ENST00000584054	GJD4	Q96KN9	370 aa	Predicted RBP	13.38	□□□□□ -0.27
EIF4A1-231	ENST00000584054	FCHSD2	O94868	740 aa		13.37	□□□□□ -0.27
EIF4A1-231	ENST00000584054	EVA1C	P58658	441 aa		13.37	□□□□□ -0.27
EIF4A1-231	ENST00000584054	QTRT2	Q9H974	415 aa	Known RBP	13.37	□□□□□ -0.27
EIF4A1-231	ENST00000584054	NUDC	Q9Y266	331 aa		13.37	□□□□□ -0.27
EIF4A1-231	ENST00000584054	RGPD2	P0DJD1	1756 aa		13.37	□□□□□ -0.27
EIF4A1-231	ENST00000584054	ZBTB7C	A1YPR0	619 aa		13.36	□□□□□ -0.27
EIF4A1-231	ENST00000584054	TOM1L2	Q6ZVM7	507 aa		13.36	□□□□□ -0.27
EIF4A1-231	ENST00000584054	TCP11L2	Q8N4U5	519 aa		13.36	□□□□□ -0.27
EIF4A1-231	ENST00000584054	PLEKHF1	Q96S99	279 aa		13.36	□□□□□ -0.27
EIF4A1-231	ENST00000584054	RSPH6A	Q9H0K4	717 aa		13.36	□□□□□ -0.27
EIF4A1-231	ENST00000584054	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
EIF4A1-231	ENST00000584054	THSD7A	Q9UPZ6	1657 aa		13.35	□□□□□ -0.27
EIF4A1-231	ENST00000584054	POTEA	Q6S8J7	498 aa		13.35	□□□□□ -0.27
EIF4A1-231	ENST00000584054	LTV1	Q96GA3	475 aa	Predicted RBP	13.35	□□□□□ -0.27
EIF4A1-231	ENST00000584054	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.35	□□□□□ -0.27
EIF4A1-231	ENST00000584054	STRN4	Q9NRL3	753 aa		13.35	□□□□□ -0.27
EIF4A1-231	ENST00000584054	OVOS2	A0A0G2JMS6	1433 aa		13.34	□□□□□ -0.27
EIF4A1-231	ENST00000584054	RBM6	P78332	1123 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms