RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 COL14A1Q05707 1796 aaKnown RBP22.37■■□□□ 1.17
CDK5RAP3-230ENST00000584042 KIAA0232Q92628 1395 aa22.37■■□□□ 1.17
CDK5RAP3-230ENST00000584042 IP6K1Q92551 441 aa22.36■■□□□ 1.17
CDK5RAP3-230ENST00000584042 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
CDK5RAP3-230ENST00000584042 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
CDK5RAP3-230ENST00000584042 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
CDK5RAP3-230ENST00000584042 HSP90AB2PQ58FF8 381 aa22.34■■□□□ 1.17
CDK5RAP3-230ENST00000584042 FAM9BQ8IZU0 186 aa22.34■■□□□ 1.17
CDK5RAP3-230ENST00000584042 PLEKHG5O94827 1062 aa22.33■■□□□ 1.17
CDK5RAP3-230ENST00000584042 IL13P35225 146 aa22.33■■□□□ 1.17
CDK5RAP3-230ENST00000584042 ZC3H6P61129 1189 aaKnown RBP22.32■■□□□ 1.16
CDK5RAP3-230ENST00000584042 EIF4A2Q14240 407 aaKnown RBP22.32■■□□□ 1.16
CDK5RAP3-230ENST00000584042 PLCH1Q4KWH8 1693 aa22.31■■□□□ 1.16
CDK5RAP3-230ENST00000584042 HSPA1LP34931 641 aa22.3■■□□□ 1.16
CDK5RAP3-230ENST00000584042 PRDM11Q9NQV5 511 aa22.3■■□□□ 1.16
CDK5RAP3-230ENST00000584042 NCAPD2Q15021 1401 aa22.29■■□□□ 1.16
CDK5RAP3-230ENST00000584042 ZBTB7CA1YPR0 619 aa22.28■■□□□ 1.16
CDK5RAP3-230ENST00000584042 ADAMTS8Q9UP79 889 aa22.28■■□□□ 1.16
CDK5RAP3-230ENST00000584042 NWD2Q9ULI1 1742 aa22.28■■□□□ 1.16
CDK5RAP3-230ENST00000584042 ERBB3P21860 1342 aa22.28■■□□□ 1.16
CDK5RAP3-230ENST00000584042 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
CDK5RAP3-230ENST00000584042 COL5A2P05997 1499 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-230ENST00000584042 NRAPQ86VF7 1730 aa22.27■■□□□ 1.16
CDK5RAP3-230ENST00000584042 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.16
CDK5RAP3-230ENST00000584042 IGSF1Q8N6C5 1336 aa22.27■■□□□ 1.16
CDK5RAP3-230ENST00000584042 KDRP35968 1356 aa22.26■■□□□ 1.15
CDK5RAP3-230ENST00000584042 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
CDK5RAP3-230ENST00000584042 U2AF1L5P0DN76 240 aaPredicted RBP22.26■■□□□ 1.15
CDK5RAP3-230ENST00000584042 U2AF1Q01081 240 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDK5RAP3-230ENST00000584042 CHRNA2Q15822 529 aa22.24■■□□□ 1.15
CDK5RAP3-230ENST00000584042 LRP6O75581 1613 aa22.24■■□□□ 1.15
CDK5RAP3-230ENST00000584042 ANKRD24Q8TF21 1146 aa22.23■■□□□ 1.15
CDK5RAP3-230ENST00000584042 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
CDK5RAP3-230ENST00000584042 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
CDK5RAP3-230ENST00000584042 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
CDK5RAP3-230ENST00000584042 FCHSD2O94868 740 aa22.2■■□□□ 1.14
CDK5RAP3-230ENST00000584042 LTV1Q96GA3 475 aaPredicted RBP22.2■■□□□ 1.14
CDK5RAP3-230ENST00000584042 EYA1Q99502 592 aa22.2■■□□□ 1.14
CDK5RAP3-230ENST00000584042 PLEKHG2Q9H7P9 1386 aa22.19■■□□□ 1.14
CDK5RAP3-230ENST00000584042 SLIT2O94813 1529 aa22.19■■□□□ 1.14
CDK5RAP3-230ENST00000584042 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
CDK5RAP3-230ENST00000584042 WDR17Q8IZU2 1322 aa22.18■■□□□ 1.14
CDK5RAP3-230ENST00000584042 FAM83GA6ND36 823 aa22.18■■□□□ 1.14
CDK5RAP3-230ENST00000584042 FBXO41Q8TF61 875 aa22.18■■□□□ 1.14
CDK5RAP3-230ENST00000584042 RUNDC1Q96C34 613 aa22.18■■□□□ 1.14
CDK5RAP3-230ENST00000584042 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
CDK5RAP3-230ENST00000584042 PLEKHF1Q96S99 279 aa22.17■■□□□ 1.14
CDK5RAP3-230ENST00000584042 WNK3Q9BYP7 1800 aa22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 NUTM2BA6NNL0 878 aaPredicted RBP22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 NUTM2EB1AL46 878 aaPredicted RBP22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 HMOX1P09601 288 aa22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 HNRNPUQ00839 825 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 SULT6B1Q6IMI4 303 aa22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 AEBP1Q8IUX7 1158 aa22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 NUTM2AQ8IVF1 878 aaPredicted RBP22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 CCDC146Q8IYE0 955 aa22.16■■□□□ 1.14
CDK5RAP3-230ENST00000584042 PARP4Q9UKK3 1724 aaKnown RBP22.15■■□□□ 1.14
CDK5RAP3-230ENST00000584042 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
CDK5RAP3-230ENST00000584042 ADAMTS2O95450 1211 aa22.15■■□□□ 1.14
CDK5RAP3-230ENST00000584042 PRKAR2BP31323 418 aa22.15■■□□□ 1.14
CDK5RAP3-230ENST00000584042 NBPF6Q5VWK0 638 aa22.14■■□□□ 1.13
CDK5RAP3-230ENST00000584042 NBPF4Q96M43 638 aa22.14■■□□□ 1.13
CDK5RAP3-230ENST00000584042 CRB1P82279 1406 aa22.14■■□□□ 1.13
CDK5RAP3-230ENST00000584042 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
CDK5RAP3-230ENST00000584042 CSB-PGBD3P0DP91 1061 aa22.13■■□□□ 1.13
CDK5RAP3-230ENST00000584042 BTG4Q9NY30 223 aa22.13■■□□□ 1.13
CDK5RAP3-230ENST00000584042 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
CDK5RAP3-230ENST00000584042 NEFMP07197 916 aa22.12■■□□□ 1.13
CDK5RAP3-230ENST00000584042 NGEFQ8N5V2 710 aa22.12■■□□□ 1.13
CDK5RAP3-230ENST00000584042 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
CDK5RAP3-230ENST00000584042 DLG5Q8TDM6 1919 aa22.1■■□□□ 1.13
CDK5RAP3-230ENST00000584042 NLRP2Q9NX02 1062 aa22.1■■□□□ 1.13
CDK5RAP3-230ENST00000584042 APAF1O14727 1248 aa22.09■■□□□ 1.13
CDK5RAP3-230ENST00000584042 USHBP1Q8N6Y0 703 aa22.09■■□□□ 1.13
CDK5RAP3-230ENST00000584042 MEGF6O75095 1541 aa22.09■■□□□ 1.13
CDK5RAP3-230ENST00000584042 TCP11L2Q8N4U5 519 aa22.08■■□□□ 1.13
CDK5RAP3-230ENST00000584042 CARD10Q9BWT7 1032 aa22.08■■□□□ 1.13
CDK5RAP3-230ENST00000584042 EVA1CP58658 441 aa22.07■■□□□ 1.12
CDK5RAP3-230ENST00000584042 LARP1Q6PKG0 1096 aaKnown RBP22.07■■□□□ 1.12
CDK5RAP3-230ENST00000584042 TOM1L2Q6ZVM7 507 aa22.07■■□□□ 1.12
CDK5RAP3-230ENST00000584042 STRN4Q9NRL3 753 aa22.07■■□□□ 1.12
CDK5RAP3-230ENST00000584042 C8orf37Q96NL8 207 aa22.06■■□□□ 1.12
CDK5RAP3-230ENST00000584042 BCL9LQ86UU0 1499 aa22.06■■□□□ 1.12
CDK5RAP3-230ENST00000584042 OVOS2A0A0G2JMS6 1433 aa22.06■■□□□ 1.12
CDK5RAP3-230ENST00000584042 NFE2L2Q16236 605 aa22.05■■□□□ 1.12
CDK5RAP3-230ENST00000584042 FNBP4Q8N3X1 1017 aaPredicted RBP22.05■■□□□ 1.12
CDK5RAP3-230ENST00000584042 TMPOP42166 694 aaKnown RBP22.04■■□□□ 1.12
CDK5RAP3-230ENST00000584042 CCDC27Q2M243 656 aa22.04■■□□□ 1.12
CDK5RAP3-230ENST00000584042 MEX3CQ5U5Q3 659 aaKnown RBP22.04■■□□□ 1.12
CDK5RAP3-230ENST00000584042 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
CDK5RAP3-230ENST00000584042 DISP2A7MBM2 1401 aa22.04■■□□□ 1.12
CDK5RAP3-230ENST00000584042 LRRC37A3O60309 1634 aa22.03■■□□□ 1.12
CDK5RAP3-230ENST00000584042 GAS2L2Q8NHY3 880 aa22.03■■□□□ 1.12
CDK5RAP3-230ENST00000584042 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-230ENST00000584042 ZNF521Q96K83 1311 aa22.03■■□□□ 1.12
CDK5RAP3-230ENST00000584042 SHANK3Q9BYB0 1731 aa22.03■■□□□ 1.12
CDK5RAP3-230ENST00000584042 UNC5CLQ8IV45 518 aa22.02■■□□□ 1.12
CDK5RAP3-230ENST00000584042 RAPGEF4Q8WZA2 1011 aa22.02■■□□□ 1.12
CDK5RAP3-230ENST00000584042 NGLY1Q96IV0 654 aa22.02■■□□□ 1.12
CDK5RAP3-230ENST00000584042 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms