RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MDM2Q00987 491 aaPredicted RBP7.23□□□□□ -1.25
KPNB1-208ENST00000580019 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
KPNB1-208ENST00000580019 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
KPNB1-208ENST00000580019 MAP4K5Q9Y4K4 846 aa7.23□□□□□ -1.25
KPNB1-208ENST00000580019 Q6ZVU0 165 aa7.22□□□□□ -1.25
KPNB1-208ENST00000580019 ITGB7P26010 798 aa7.21□□□□□ -1.26
KPNB1-208ENST00000580019 VASH1Q7L8A9 365 aaPredicted RBP7.21□□□□□ -1.26
KPNB1-208ENST00000580019 P3H3Q8IVL6 736 aa7.21□□□□□ -1.26
KPNB1-208ENST00000580019 ACDQ96AP0 544 aa7.21□□□□□ -1.26
KPNB1-208ENST00000580019 GOLGA2P5Q9HBQ8 144 aa7.21□□□□□ -1.26
KPNB1-208ENST00000580019 PGPEP1Q9NXJ5 209 aa7.21□□□□□ -1.26
KPNB1-208ENST00000580019 SPDYE5A6NIY4 337 aa7.2□□□□□ -1.26
KPNB1-208ENST00000580019 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
KPNB1-208ENST00000580019 CBLBQ13191 982 aa7.2□□□□□ -1.26
KPNB1-208ENST00000580019 FOXR1Q6PIV2 292 aa7.2□□□□□ -1.26
KPNB1-208ENST00000580019 MKL2Q9ULH7 1088 aa7.2□□□□□ -1.26
KPNB1-208ENST00000580019 TESPA1A2RU30 521 aaPredicted RBP7.19□□□□□ -1.26
KPNB1-208ENST00000580019 C1QTNF2Q9BXJ5 285 aa7.19□□□□□ -1.26
KPNB1-208ENST00000580019 SEMA6BQ9H3T3 888 aa7.19□□□□□ -1.26
KPNB1-208ENST00000580019 CUEDC1Q9NWM3 386 aaPredicted RBP7.19□□□□□ -1.26
KPNB1-208ENST00000580019 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
KPNB1-208ENST00000580019 LYPD8Q6UX82 237 aa7.18□□□□□ -1.26
KPNB1-208ENST00000580019 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
KPNB1-208ENST00000580019 GMCL1Q96IK5 515 aa7.18□□□□□ -1.26
KPNB1-208ENST00000580019 POLMQ9NP87 494 aaPredicted RBP7.18□□□□□ -1.26
KPNB1-208ENST00000580019 COL8A1P27658 744 aa7.17□□□□□ -1.26
KPNB1-208ENST00000580019 SNRPNP63162 240 aaKnown RBP7.17□□□□□ -1.26
KPNB1-208ENST00000580019 INSM2Q96T92 566 aaPredicted RBP7.17□□□□□ -1.26
KPNB1-208ENST00000580019 OIP5O43482 229 aa7.16□□□□□ -1.26
KPNB1-208ENST00000580019 MTMR2Q13614 643 aa7.16□□□□□ -1.26
KPNB1-208ENST00000580019 PPP1R26Q5T8A7 1209 aaPredicted RBP7.16□□□□□ -1.26
KPNB1-208ENST00000580019 TRMT44Q8IYL2 757 aaKnown RBP7.16□□□□□ -1.26
KPNB1-208ENST00000580019 MAP10Q9P2G4 905 aa7.16□□□□□ -1.26
KPNB1-208ENST00000580019 F12P00748 615 aaPredicted RBP7.15□□□□□ -1.26
KPNB1-208ENST00000580019 ZNF837Q96EG3 531 aaPredicted RBP7.15□□□□□ -1.26
KPNB1-208ENST00000580019 FAM217BQ9NTX9 383 aaPredicted RBP7.15□□□□□ -1.26
KPNB1-208ENST00000580019 C1QTNF9BB2RNN3 333 aa7.14□□□□□ -1.27
KPNB1-208ENST00000580019 GPR25O00155 361 aa7.14□□□□□ -1.27
KPNB1-208ENST00000580019 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
KPNB1-208ENST00000580019 NSFL1CQ9UNZ2 370 aaKnown RBP7.14□□□□□ -1.27
KPNB1-208ENST00000580019 RELBQ01201 579 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 GRIN2CQ14957 1233 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 GPIHBP1Q8IV16 184 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 GPCPD1Q9NPB8 672 aa7.13□□□□□ -1.27
KPNB1-208ENST00000580019 CLCN1P35523 988 aa7.12□□□□□ -1.27
KPNB1-208ENST00000580019 ZFP64Q9NPA5 681 aa7.12□□□□□ -1.27
KPNB1-208ENST00000580019 NDUFV2P19404 249 aa7.11□□□□□ -1.27
KPNB1-208ENST00000580019 NBPF11Q86T75 865 aa7.11□□□□□ -1.27
KPNB1-208ENST00000580019 CD163Q86VB7 1156 aa7.11□□□□□ -1.27
KPNB1-208ENST00000580019 ARMC2Q8NEN0 867 aa7.11□□□□□ -1.27
KPNB1-208ENST00000580019 MX2P20592 715 aa7.1□□□□□ -1.27
KPNB1-208ENST00000580019 ARTNQ5T4W7 220 aa7.1□□□□□ -1.27
KPNB1-208ENST00000580019 TRERF1Q96PN7 1200 aa7.1□□□□□ -1.27
KPNB1-208ENST00000580019 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
KPNB1-208ENST00000580019 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
KPNB1-208ENST00000580019 IRF6O14896 467 aa7.09□□□□□ -1.27
KPNB1-208ENST00000580019 DOC2BQ14184 412 aa7.09□□□□□ -1.27
KPNB1-208ENST00000580019 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
KPNB1-208ENST00000580019 LYSMD3Q7Z3D4 306 aa7.09□□□□□ -1.27
KPNB1-208ENST00000580019 SPIRE2Q8WWL2 714 aa7.09□□□□□ -1.27
KPNB1-208ENST00000580019 OXCT2Q9BYC2 517 aaPredicted RBP7.09□□□□□ -1.27
KPNB1-208ENST00000580019 PIK3R2O00459 728 aa7.08□□□□□ -1.28
KPNB1-208ENST00000580019 SLC24A1O60721 1099 aa7.08□□□□□ -1.28
KPNB1-208ENST00000580019 DHX9Q08211 1270 aaKnown RBP7.08□□□□□ -1.28
KPNB1-208ENST00000580019 NBPF14Q5TI25 921 aa7.08□□□□□ -1.28
KPNB1-208ENST00000580019 ZNF395Q9H8N7 513 aaPredicted RBP7.08□□□□□ -1.28
KPNB1-208ENST00000580019 MAGEB6P1A0A0J9YX57 407 aa7.07□□□□□ -1.28
KPNB1-208ENST00000580019 MAP2K3P46734 347 aa7.07□□□□□ -1.28
KPNB1-208ENST00000580019 DBN1Q16643 649 aa7.07□□□□□ -1.28
KPNB1-208ENST00000580019 FOXD4L6Q3SYB3 417 aaPredicted RBP7.07□□□□□ -1.28
KPNB1-208ENST00000580019 FOXD4L5Q5VV16 416 aaPredicted RBP7.07□□□□□ -1.28
KPNB1-208ENST00000580019 FOXD4L3Q6VB84 417 aaPredicted RBP7.07□□□□□ -1.28
KPNB1-208ENST00000580019 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
KPNB1-208ENST00000580019 SHISA8B8ZZ34 492 aa7.06□□□□□ -1.28
KPNB1-208ENST00000580019 H7C1W4 665 aa7.06□□□□□ -1.28
KPNB1-208ENST00000580019 CHRNA4P43681 627 aa7.06□□□□□ -1.28
KPNB1-208ENST00000580019 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
KPNB1-208ENST00000580019 SH3BP5LQ7L8J4 393 aa7.06□□□□□ -1.28
KPNB1-208ENST00000580019 SUV39H2Q9H5I1 410 aa7.06□□□□□ -1.28
KPNB1-208ENST00000580019 RIPOR1Q6ZS17 1223 aa7.05□□□□□ -1.28
KPNB1-208ENST00000580019 CFAP99D6REC4 459 aa7.04□□□□□ -1.28
KPNB1-208ENST00000580019 KRI1Q8N9T8 703 aaKnown RBP7.04□□□□□ -1.28
KPNB1-208ENST00000580019 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
KPNB1-208ENST00000580019 LINC00114Q6XXX2 140 aa7.03□□□□□ -1.28
KPNB1-208ENST00000580019 CARD14Q9BXL6 1004 aa7.03□□□□□ -1.28
KPNB1-208ENST00000580019 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
KPNB1-208ENST00000580019 GNB5O14775 395 aa7.02□□□□□ -1.29
KPNB1-208ENST00000580019 COBLO75128 1261 aa7.02□□□□□ -1.29
KPNB1-208ENST00000580019 RHOQP17081 205 aa7.02□□□□□ -1.29
KPNB1-208ENST00000580019 ERFEQ4G0M1 354 aa7.02□□□□□ -1.29
KPNB1-208ENST00000580019 KCTD15Q96SI1 283 aaPredicted RBP7.02□□□□□ -1.29
KPNB1-208ENST00000580019 CDV3Q9UKY7 258 aaKnown RBP7.02□□□□□ -1.29
KPNB1-208ENST00000580019 GJA5P36382 358 aa7.01□□□□□ -1.29
KPNB1-208ENST00000580019 PRICKLE2Q7Z3G6 844 aa7.01□□□□□ -1.29
KPNB1-208ENST00000580019 EDARADDQ8WWZ3 215 aa7.01□□□□□ -1.29
KPNB1-208ENST00000580019 NOP53Q9NZM5 478 aaKnown RBP7.01□□□□□ -1.29
KPNB1-208ENST00000580019 GDF2Q9UK05 429 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms