RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 CGNL1Q0VF96 1302 aa25.79■■□□□ 1.72
NEK4P2-201ENST00000580004 CRB1P82279 1406 aa25.78■■□□□ 1.72
NEK4P2-201ENST00000580004 THSD7AQ9UPZ6 1657 aa25.77■■□□□ 1.72
NEK4P2-201ENST00000580004 SOX12O15370 315 aa25.77■■□□□ 1.72
NEK4P2-201ENST00000580004 THRAP3Q9Y2W1 955 aaKnown RBP25.77■■□□□ 1.72
NEK4P2-201ENST00000580004 KIF7Q2M1P5 1343 aa25.77■■□□□ 1.72
NEK4P2-201ENST00000580004 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
NEK4P2-201ENST00000580004 BRWD3Q6RI45 1802 aa25.77■■□□□ 1.72
NEK4P2-201ENST00000580004 ZBTB7CA1YPR0 619 aa25.76■■□□□ 1.71
NEK4P2-201ENST00000580004 BLMP54132 1417 aaPredicted RBP25.75■■□□□ 1.71
NEK4P2-201ENST00000580004 WDR17Q8IZU2 1322 aa25.75■■□□□ 1.71
NEK4P2-201ENST00000580004 BARGINQ6ZT62 677 aa25.75■■□□□ 1.71
NEK4P2-201ENST00000580004 SEPT12Q8IYM1 358 aa25.75■■□□□ 1.71
NEK4P2-201ENST00000580004 AXIN2Q9Y2T1 843 aa25.75■■□□□ 1.71
NEK4P2-201ENST00000580004 LARP1Q6PKG0 1096 aaKnown RBP25.74■■□□□ 1.71
NEK4P2-201ENST00000580004 GGNBP2Q9H3C7 697 aa25.74■■□□□ 1.71
NEK4P2-201ENST00000580004 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
NEK4P2-201ENST00000580004 PANK3Q9H999 370 aa25.73■■□□□ 1.71
NEK4P2-201ENST00000580004 RTL1A6NKG5 1358 aa25.72■■□□□ 1.71
NEK4P2-201ENST00000580004 NSD2O96028 1365 aa25.72■■□□□ 1.71
NEK4P2-201ENST00000580004 FAM208AQ9UK61 1670 aaKnown RBP25.72■■□□□ 1.71
NEK4P2-201ENST00000580004 TCP11L2Q8N4U5 519 aa25.72■■□□□ 1.71
NEK4P2-201ENST00000580004 KIF24Q5T7B8 1368 aa25.71■■□□□ 1.71
NEK4P2-201ENST00000580004 EP400Q96L91 3159 aa25.71■■□□□ 1.71
NEK4P2-201ENST00000580004 IP6K1Q92551 441 aa25.7■■□□□ 1.7
NEK4P2-201ENST00000580004 WNK3Q9BYP7 1800 aa25.7■■□□□ 1.7
NEK4P2-201ENST00000580004 CCDC7Q96M83 1385 aa25.69■■□□□ 1.7
NEK4P2-201ENST00000580004 PARP4Q9UKK3 1724 aaKnown RBP25.68■■□□□ 1.7
NEK4P2-201ENST00000580004 ERBB3P21860 1342 aa25.68■■□□□ 1.7
NEK4P2-201ENST00000580004 MAP3K19Q56UN5 1328 aa25.68■■□□□ 1.7
NEK4P2-201ENST00000580004 TOM1L2Q6ZVM7 507 aa25.68■■□□□ 1.7
NEK4P2-201ENST00000580004 KRT27Q7Z3Y8 459 aa25.67■■□□□ 1.7
NEK4P2-201ENST00000580004 CARD10Q9BWT7 1032 aa25.67■■□□□ 1.7
NEK4P2-201ENST00000580004 A0A0G2JS52 829 aa25.66■■□□□ 1.7
NEK4P2-201ENST00000580004 MYT1Q01538 1121 aa25.66■■□□□ 1.7
NEK4P2-201ENST00000580004 UPF1Q92900 1129 aaKnown RBP eCLIP25.66■■□□□ 1.7
NEK4P2-201ENST00000580004 CDCA7Q9BWT1 371 aaPredicted RBP25.66■■□□□ 1.7
NEK4P2-201ENST00000580004 WASHC2AQ641Q2 1341 aa25.65■■□□□ 1.7
NEK4P2-201ENST00000580004 CSB-PGBD3P0DP91 1061 aa25.65■■□□□ 1.7
NEK4P2-201ENST00000580004 USP35Q9P2H5 1018 aa25.65■■□□□ 1.7
NEK4P2-201ENST00000580004 KNSTRNQ9Y448 316 aa25.64■■□□□ 1.7
NEK4P2-201ENST00000580004 MAP2P11137 1827 aaKnown RBP25.63■■□□□ 1.69
NEK4P2-201ENST00000580004 HOXC9P31274 260 aa25.63■■□□□ 1.69
NEK4P2-201ENST00000580004 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
NEK4P2-201ENST00000580004 AMPHP49418 695 aa25.63■■□□□ 1.69
NEK4P2-201ENST00000580004 CCDC125Q86Z20 511 aa25.63■■□□□ 1.69
NEK4P2-201ENST00000580004 ANKRD24Q8TF21 1146 aa25.62■■□□□ 1.69
NEK4P2-201ENST00000580004 FLT4P35916 1363 aa25.61■■□□□ 1.69
NEK4P2-201ENST00000580004 RRS1Q15050 365 aaKnown RBP25.59■■□□□ 1.69
NEK4P2-201ENST00000580004 PEAK1Q9H792 1746 aa25.59■■□□□ 1.69
NEK4P2-201ENST00000580004 INSRP06213 1382 aa25.58■■□□□ 1.69
NEK4P2-201ENST00000580004 SMG6Q86US8 1419 aaKnown RBP25.58■■□□□ 1.69
NEK4P2-201ENST00000580004 LRRC37A3O60309 1634 aa25.58■■□□□ 1.69
NEK4P2-201ENST00000580004 DISP2A7MBM2 1401 aa25.57■■□□□ 1.68
NEK4P2-201ENST00000580004 PER1O15534 1290 aaPredicted RBP25.57■■□□□ 1.68
NEK4P2-201ENST00000580004 FBLN1P23142 703 aa25.57■■□□□ 1.68
NEK4P2-201ENST00000580004 NLRP2Q9NX02 1062 aa25.56■■□□□ 1.68
NEK4P2-201ENST00000580004 NPC1L1Q9UHC9 1359 aa25.56■■□□□ 1.68
NEK4P2-201ENST00000580004 PDE3BQ13370 1112 aa25.55■■□□□ 1.68
NEK4P2-201ENST00000580004 AMER1Q5JTC6 1135 aaPredicted RBP25.55■■□□□ 1.68
NEK4P2-201ENST00000580004 DDB1Q16531 1140 aa25.53■■□□□ 1.68
NEK4P2-201ENST00000580004 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.68
NEK4P2-201ENST00000580004 FAM196AQ6ZSG2 479 aa25.51■■□□□ 1.67
NEK4P2-201ENST00000580004 MORC1Q86VD1 984 aa25.51■■□□□ 1.67
NEK4P2-201ENST00000580004 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
NEK4P2-201ENST00000580004 EMILIN1Q9Y6C2 1016 aa25.51■■□□□ 1.67
NEK4P2-201ENST00000580004 RGPD2P0DJD1 1756 aa25.51■■□□□ 1.67
NEK4P2-201ENST00000580004 TNS2Q63HR2 1409 aa25.49■■□□□ 1.67
NEK4P2-201ENST00000580004 IL2RBP14784 551 aa25.49■■□□□ 1.67
NEK4P2-201ENST00000580004 HSP90AB2PQ58FF8 381 aa25.49■■□□□ 1.67
NEK4P2-201ENST00000580004 LTV1Q96GA3 475 aaPredicted RBP25.48■■□□□ 1.67
NEK4P2-201ENST00000580004 OVOS2A0A0G2JMS6 1433 aa25.47■■□□□ 1.67
NEK4P2-201ENST00000580004 BCL9O00512 1426 aa25.47■■□□□ 1.67
NEK4P2-201ENST00000580004 EXOC5O00471 708 aa25.47■■□□□ 1.67
NEK4P2-201ENST00000580004 SF3B2Q13435 895 aaKnown RBP25.45■■□□□ 1.66
NEK4P2-201ENST00000580004 PPM1GO15355 546 aaPredicted RBP25.44■■□□□ 1.66
NEK4P2-201ENST00000580004 TNNT2P45379 298 aaPredicted RBP25.44■■□□□ 1.66
NEK4P2-201ENST00000580004 NCAPD2Q15021 1401 aa25.43■■□□□ 1.66
NEK4P2-201ENST00000580004 TNS1Q9HBL0 1735 aaKnown RBP25.43■■□□□ 1.66
NEK4P2-201ENST00000580004 SBF2Q86WG5 1849 aa25.42■■□□□ 1.66
NEK4P2-201ENST00000580004 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
NEK4P2-201ENST00000580004 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
NEK4P2-201ENST00000580004 FAM182BQ5T319 152 aa25.4■■□□□ 1.66
NEK4P2-201ENST00000580004 PLEKHG2Q9H7P9 1386 aa25.4■■□□□ 1.66
NEK4P2-201ENST00000580004 CC2D1BQ5T0F9 858 aaKnown RBP25.38■■□□□ 1.65
NEK4P2-201ENST00000580004 MARCH10Q8NA82 808 aaPredicted RBP25.38■■□□□ 1.65
NEK4P2-201ENST00000580004 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
NEK4P2-201ENST00000580004 BAG6P46379 1132 aa25.36■■□□□ 1.65
NEK4P2-201ENST00000580004 MEGF6O75095 1541 aa25.36■■□□□ 1.65
NEK4P2-201ENST00000580004 SHANK3Q9BYB0 1731 aa25.35■■□□□ 1.65
NEK4P2-201ENST00000580004 EIF4A2Q14240 407 aaKnown RBP25.35■■□□□ 1.65
NEK4P2-201ENST00000580004 RGPD3A6NKT7 1758 aaPredicted RBP25.33■■□□□ 1.65
NEK4P2-201ENST00000580004 RGPD4Q7Z3J3 1758 aa25.33■■□□□ 1.65
NEK4P2-201ENST00000580004 TRIM37O94972 964 aa25.33■■□□□ 1.65
NEK4P2-201ENST00000580004 TATP17735 454 aaPredicted RBP25.33■■□□□ 1.65
NEK4P2-201ENST00000580004 PARD3Q8TEW0 1356 aa25.32■■□□□ 1.64
NEK4P2-201ENST00000580004 PKD1L3Q7Z443 1732 aa25.32■■□□□ 1.64
NEK4P2-201ENST00000580004 ZCRB1Q8TBF4 217 aaKnown RBP25.32■■□□□ 1.64
NEK4P2-201ENST00000580004 EYA1Q99502 592 aa25.32■■□□□ 1.64
NEK4P2-201ENST00000580004 USHBP1Q8N6Y0 703 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms