RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
CTC1-205ENST00000578537 GCP02774 474 aa17.54■□□□□ 0.4
CTC1-205ENST00000578537 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
CTC1-205ENST00000578537 RGS12O14924 1447 aa17.54■□□□□ 0.4
CTC1-205ENST00000578537 MTHFSP49914 203 aa17.53■□□□□ 0.4
CTC1-205ENST00000578537 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
CTC1-205ENST00000578537 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.4
CTC1-205ENST00000578537 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
CTC1-205ENST00000578537 ABCC6O95255 1503 aa17.52■□□□□ 0.39
CTC1-205ENST00000578537 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
CTC1-205ENST00000578537 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
CTC1-205ENST00000578537 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
CTC1-205ENST00000578537 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
CTC1-205ENST00000578537 CPDO75976 1380 aa17.5■□□□□ 0.39
CTC1-205ENST00000578537 FAM208AQ9UK61 1670 aaKnown RBP17.49■□□□□ 0.39
CTC1-205ENST00000578537 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
CTC1-205ENST00000578537 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
CTC1-205ENST00000578537 CHRNA2Q15822 529 aa17.48■□□□□ 0.39
CTC1-205ENST00000578537 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
CTC1-205ENST00000578537 C8orf37Q96NL8 207 aa17.48■□□□□ 0.39
CTC1-205ENST00000578537 INSRP06213 1382 aa17.48■□□□□ 0.39
CTC1-205ENST00000578537 FLT4P35916 1363 aa17.48■□□□□ 0.39
CTC1-205ENST00000578537 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
CTC1-205ENST00000578537 CCER2I3L3R5 266 aa17.47■□□□□ 0.39
CTC1-205ENST00000578537 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
CTC1-205ENST00000578537 HOXC9P31274 260 aa17.47■□□□□ 0.39
CTC1-205ENST00000578537 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
CTC1-205ENST00000578537 HSP90AB2PQ58FF8 381 aa17.46■□□□□ 0.39
CTC1-205ENST00000578537 WNK3Q9BYP7 1800 aa17.46■□□□□ 0.39
CTC1-205ENST00000578537 AXIN2Q9Y2T1 843 aa17.45■□□□□ 0.38
CTC1-205ENST00000578537 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
CTC1-205ENST00000578537 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
CTC1-205ENST00000578537 AMPHP49418 695 aa17.43■□□□□ 0.38
CTC1-205ENST00000578537 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
CTC1-205ENST00000578537 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
CTC1-205ENST00000578537 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.43■□□□□ 0.38
CTC1-205ENST00000578537 IP6K1Q92551 441 aa17.42■□□□□ 0.38
CTC1-205ENST00000578537 NGLY1Q96IV0 654 aa17.42■□□□□ 0.38
CTC1-205ENST00000578537 PRDM11Q9NQV5 511 aa17.42■□□□□ 0.38
CTC1-205ENST00000578537 EP400Q96L91 3159 aa17.42■□□□□ 0.38
CTC1-205ENST00000578537 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
CTC1-205ENST00000578537 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
CTC1-205ENST00000578537 IL13P35225 146 aa17.41■□□□□ 0.38
CTC1-205ENST00000578537 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
CTC1-205ENST00000578537 SLIT2O94813 1529 aa17.41■□□□□ 0.38
CTC1-205ENST00000578537 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
CTC1-205ENST00000578537 NCAPD2Q15021 1401 aa17.39■□□□□ 0.38
CTC1-205ENST00000578537 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
CTC1-205ENST00000578537 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
CTC1-205ENST00000578537 ERBB3P21860 1342 aa17.38■□□□□ 0.37
CTC1-205ENST00000578537 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
CTC1-205ENST00000578537 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
CTC1-205ENST00000578537 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
CTC1-205ENST00000578537 AEBP1Q8IUX7 1158 aa17.36■□□□□ 0.37
CTC1-205ENST00000578537 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
CTC1-205ENST00000578537 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
CTC1-205ENST00000578537 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
CTC1-205ENST00000578537 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
CTC1-205ENST00000578537 USP21Q9UK80 565 aa17.35■□□□□ 0.37
CTC1-205ENST00000578537 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
CTC1-205ENST00000578537 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
CTC1-205ENST00000578537 PKD1L3Q7Z443 1732 aa17.34■□□□□ 0.37
CTC1-205ENST00000578537 BCL9LQ86UU0 1499 aa17.34■□□□□ 0.37
CTC1-205ENST00000578537 EYA1Q99502 592 aa17.34■□□□□ 0.37
CTC1-205ENST00000578537 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
CTC1-205ENST00000578537 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
CTC1-205ENST00000578537 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
CTC1-205ENST00000578537 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
CTC1-205ENST00000578537 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
CTC1-205ENST00000578537 BTG4Q9NY30 223 aa17.33■□□□□ 0.36
CTC1-205ENST00000578537 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
CTC1-205ENST00000578537 MEGF6O75095 1541 aa17.32■□□□□ 0.36
CTC1-205ENST00000578537 ATRNO75882 1429 aa17.32■□□□□ 0.36
CTC1-205ENST00000578537 KDRP35968 1356 aa17.32■□□□□ 0.36
CTC1-205ENST00000578537 HMOX1P09601 288 aa17.32■□□□□ 0.36
CTC1-205ENST00000578537 FNBP4Q8N3X1 1017 aaPredicted RBP17.32■□□□□ 0.36
CTC1-205ENST00000578537 GLI3P10071 1580 aa17.32■□□□□ 0.36
CTC1-205ENST00000578537 WDR17Q8IZU2 1322 aa17.31■□□□□ 0.36
CTC1-205ENST00000578537 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
CTC1-205ENST00000578537 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
CTC1-205ENST00000578537 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.361e-10■■■■□ 19.8
CTC1-205ENST00000578537 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
CTC1-205ENST00000578537 CCDC146Q8IYE0 955 aa17.3■□□□□ 0.36
CTC1-205ENST00000578537 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
CTC1-205ENST00000578537 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
CTC1-205ENST00000578537 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
CTC1-205ENST00000578537 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTC1-205ENST00000578537 CRB1P82279 1406 aa17.29■□□□□ 0.36
CTC1-205ENST00000578537 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
CTC1-205ENST00000578537 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.36
CTC1-205ENST00000578537 DISP2A7MBM2 1401 aa17.27■□□□□ 0.35
CTC1-205ENST00000578537 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
CTC1-205ENST00000578537 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CTC1-205ENST00000578537 NLRP2Q9NX02 1062 aa17.26■□□□□ 0.35
CTC1-205ENST00000578537 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
CTC1-205ENST00000578537 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
CTC1-205ENST00000578537 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
CTC1-205ENST00000578537 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
CTC1-205ENST00000578537 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
CTC1-205ENST00000578537 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms