RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
PRPF8-213ENST00000576407 FLT4P35916 1363 aa11.52□□□□□ -0.57
PRPF8-213ENST00000576407 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
PRPF8-213ENST00000576407 COL18A1P39060 1754 aa11.51□□□□□ -0.57
PRPF8-213ENST00000576407 HOXC9P31274 260 aa11.51□□□□□ -0.57
PRPF8-213ENST00000576407 MIER1Q8N108 512 aa11.51□□□□□ -0.57
PRPF8-213ENST00000576407 IP6K1Q92551 441 aa11.51□□□□□ -0.57
PRPF8-213ENST00000576407 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
PRPF8-213ENST00000576407 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
PRPF8-213ENST00000576407 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
PRPF8-213ENST00000576407 ABCC6O95255 1503 aa11.5□□□□□ -0.57
PRPF8-213ENST00000576407 LMO7Q8WWI1 1683 aa11.5□□□□□ -0.57
PRPF8-213ENST00000576407 HSP90AB2PQ58FF8 381 aa11.5□□□□□ -0.57
PRPF8-213ENST00000576407 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
PRPF8-213ENST00000576407 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
PRPF8-213ENST00000576407 INSRP06213 1382 aa11.49□□□□□ -0.57
PRPF8-213ENST00000576407 BLMP54132 1417 aaPredicted RBP11.49□□□□□ -0.57
PRPF8-213ENST00000576407 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
PRPF8-213ENST00000576407 CAMTA1Q9Y6Y1 1673 aa11.49□□□□□ -0.57
PRPF8-213ENST00000576407 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
PRPF8-213ENST00000576407 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
PRPF8-213ENST00000576407 NGLY1Q96IV0 654 aa11.48□□□□□ -0.57
PRPF8-213ENST00000576407 CFAP53Q96M91 514 aa11.48□□□□□ -0.57
PRPF8-213ENST00000576407 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
PRPF8-213ENST00000576407 COL3A1P02461 1466 aaPredicted RBP11.48□□□□□ -0.57
PRPF8-213ENST00000576407 SLIT2O94813 1529 aa11.47□□□□□ -0.57
PRPF8-213ENST00000576407 EIF4A2Q14240 407 aaKnown RBP11.47□□□□□ -0.57
PRPF8-213ENST00000576407 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.57
PRPF8-213ENST00000576407 ERBB3P21860 1342 aa11.46□□□□□ -0.57
PRPF8-213ENST00000576407 DIAPH1O60610 1272 aaKnown RBP11.46□□□□□ -0.57
PRPF8-213ENST00000576407 FNBP4Q8N3X1 1017 aaPredicted RBP11.46□□□□□ -0.57
PRPF8-213ENST00000576407 ANKRD24Q8TF21 1146 aa11.46□□□□□ -0.57
PRPF8-213ENST00000576407 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
PRPF8-213ENST00000576407 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
PRPF8-213ENST00000576407 NWD2Q9ULI1 1742 aa11.46□□□□□ -0.58
PRPF8-213ENST00000576407 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
PRPF8-213ENST00000576407 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
PRPF8-213ENST00000576407 IL13P35225 146 aa11.45□□□□□ -0.58
PRPF8-213ENST00000576407 EVA1CP58658 441 aa11.45□□□□□ -0.58
PRPF8-213ENST00000576407 STRN4Q9NRL3 753 aa11.45□□□□□ -0.58
PRPF8-213ENST00000576407 NRAPQ86VF7 1730 aa11.45□□□□□ -0.58
PRPF8-213ENST00000576407 BCL9LQ86UU0 1499 aa11.44□□□□□ -0.58
PRPF8-213ENST00000576407 AFF2P51816 1311 aa11.44□□□□□ -0.58
PRPF8-213ENST00000576407 CSB-PGBD3P0DP91 1061 aa11.44□□□□□ -0.58
PRPF8-213ENST00000576407 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
PRPF8-213ENST00000576407 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
PRPF8-213ENST00000576407 UNC5CLQ8IV45 518 aa11.43□□□□□ -0.58
PRPF8-213ENST00000576407 USP21Q9UK80 565 aa11.43□□□□□ -0.58
PRPF8-213ENST00000576407 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
PRPF8-213ENST00000576407 FAM208AQ9UK61 1670 aaKnown RBP11.43□□□□□ -0.58
PRPF8-213ENST00000576407 RGPD2P0DJD1 1756 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
PRPF8-213ENST00000576407 NBPF6Q5VWK0 638 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 TOM1L2Q6ZVM7 507 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 NBPF4Q96M43 638 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 EYA1Q99502 592 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 NLRP2Q9NX02 1062 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 RGPD1P0DJD0 1748 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
PRPF8-213ENST00000576407 CRB1P82279 1406 aa11.42□□□□□ -0.58
PRPF8-213ENST00000576407 IGSF1Q8N6C5 1336 aa11.41□□□□□ -0.58
PRPF8-213ENST00000576407 PNISRQ8TF01 805 aaKnown RBP11.41□□□□□ -0.58
PRPF8-213ENST00000576407 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
PRPF8-213ENST00000576407 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF8-213ENST00000576407 WDR43Q15061 677 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF8-213ENST00000576407 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
PRPF8-213ENST00000576407 CARD10Q9BWT7 1032 aa11.4□□□□□ -0.58
PRPF8-213ENST00000576407 HMOX1P09601 288 aa11.39□□□□□ -0.59
PRPF8-213ENST00000576407 NCAPD2Q15021 1401 aa11.39□□□□□ -0.59
PRPF8-213ENST00000576407 VPS72Q15906 364 aa11.39□□□□□ -0.59
PRPF8-213ENST00000576407 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
PRPF8-213ENST00000576407 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
PRPF8-213ENST00000576407 ADAMTS8Q9UP79 889 aa11.39□□□□□ -0.59
PRPF8-213ENST00000576407 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
PRPF8-213ENST00000576407 SPATA31A1Q5TZJ5 1347 aa11.38□□□□□ -0.59
PRPF8-213ENST00000576407 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
PRPF8-213ENST00000576407 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
PRPF8-213ENST00000576407 ATRNO75882 1429 aa11.38□□□□□ -0.59
PRPF8-213ENST00000576407 ZNF772Q68DY9 489 aaPredicted RBP11.38□□□□□ -0.59
PRPF8-213ENST00000576407 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
PRPF8-213ENST00000576407 TRPC5Q9UL62 973 aaPredicted RBP11.38□□□□□ -0.59
PRPF8-213ENST00000576407 KDRP35968 1356 aa11.38□□□□□ -0.59
PRPF8-213ENST00000576407 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
PRPF8-213ENST00000576407 TCP11L2Q8N4U5 519 aa11.37□□□□□ -0.59
PRPF8-213ENST00000576407 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
PRPF8-213ENST00000576407 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
PRPF8-213ENST00000576407 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
PRPF8-213ENST00000576407 FCHSD2O94868 740 aa11.36□□□□□ -0.59
PRPF8-213ENST00000576407 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
PRPF8-213ENST00000576407 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
PRPF8-213ENST00000576407 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
PRPF8-213ENST00000576407 RAPGEF4Q8WZA2 1011 aa11.35□□□□□ -0.59
PRPF8-213ENST00000576407 GLI3P10071 1580 aa11.35□□□□□ -0.59
PRPF8-213ENST00000576407 MEGF6O75095 1541 aa11.35□□□□□ -0.59
PRPF8-213ENST00000576407 IL2RBP14784 551 aa11.34□□□□□ -0.59
PRPF8-213ENST00000576407 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
PRPF8-213ENST00000576407 CCDC146Q8IYE0 955 aa11.34□□□□□ -0.59
PRPF8-213ENST00000576407 PLEKHF1Q96S99 279 aa11.34□□□□□ -0.59
PRPF8-213ENST00000576407 WNK3Q9BYP7 1800 aa11.34□□□□□ -0.59
PRPF8-213ENST00000576407 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms